RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 ZNF66Q6ZN08 573 aa8.27□□□□□ -1.09
CHD1-205ENST00000508756 PNPLA1Q8N8W4 532 aa8.27□□□□□ -1.09
CHD1-205ENST00000508756 ACRBPQ8NEB7 543 aa8.27□□□□□ -1.09
CHD1-205ENST00000508756 GRAMD1AQ96CP6 724 aa8.27□□□□□ -1.09
CHD1-205ENST00000508756 POC1B-GALNT4F8VUJ3 575 aa8.26□□□□□ -1.09
CHD1-205ENST00000508756 ZSCAN9O15535 394 aaPredicted RBP8.26□□□□□ -1.09
CHD1-205ENST00000508756 PLA2G6O60733 806 aa8.26□□□□□ -1.09
CHD1-205ENST00000508756 GCATO75600 419 aa8.26□□□□□ -1.09
CHD1-205ENST00000508756 TXNL4AP83876 142 aaKnown RBP8.26□□□□□ -1.09
CHD1-205ENST00000508756 SLC10A2Q12908 348 aaPredicted RBP8.26□□□□□ -1.09
CHD1-205ENST00000508756 ATP1A4Q13733 1029 aa8.26□□□□□ -1.09
CHD1-205ENST00000508756 RAB30Q15771 203 aa8.26□□□□□ -1.09
CHD1-205ENST00000508756 FAM187BQ17R55 369 aa8.26□□□□□ -1.09
CHD1-205ENST00000508756 KRT73Q86Y46 540 aa8.26□□□□□ -1.09
CHD1-205ENST00000508756 GALNT4Q8N4A0 578 aa8.26□□□□□ -1.09
CHD1-205ENST00000508756 NGDNQ8NEJ9 315 aaKnown RBP8.26□□□□□ -1.09
CHD1-205ENST00000508756 IPO4Q8TEX9 1081 aaKnown RBP8.26□□□□□ -1.09
CHD1-205ENST00000508756 EDC3Q96F86 508 aaKnown RBP8.26□□□□□ -1.09
CHD1-205ENST00000508756 SLC39A13Q96H72 371 aa8.26□□□□□ -1.09
CHD1-205ENST00000508756 ASB2Q96Q27 587 aa8.26□□□□□ -1.09
CHD1-205ENST00000508756 STK33Q9BYT3 514 aa8.26□□□□□ -1.09
CHD1-205ENST00000508756 USP29Q9HBJ7 922 aa8.26□□□□□ -1.09
CHD1-205ENST00000508756 SLC39A10Q9ULF5 831 aa8.26□□□□□ -1.09
CHD1-205ENST00000508756 PRAMEF2O60811 474 aa8.25□□□□□ -1.09
CHD1-205ENST00000508756 DRD1P21728 446 aa8.25□□□□□ -1.09
CHD1-205ENST00000508756 PPM1AP35813 382 aa8.25□□□□□ -1.09
CHD1-205ENST00000508756 GPC5P78333 572 aa8.25□□□□□ -1.09
CHD1-205ENST00000508756 MRPS21P82921 87 aaKnown RBP8.25□□□□□ -1.09
CHD1-205ENST00000508756 GRM1Q13255 1194 aa8.25□□□□□ -1.09
CHD1-205ENST00000508756 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.25□□□□□ -1.09
CHD1-205ENST00000508756 SAP30LQ9HAJ7 183 aa8.25□□□□□ -1.09
CHD1-205ENST00000508756 TMEM8AQ9HCN3 771 aa8.25□□□□□ -1.09
CHD1-205ENST00000508756 VPS45Q9NRW7 570 aa8.25□□□□□ -1.09
CHD1-205ENST00000508756 ADARB2Q9NS39 739 aaKnown RBP8.25□□□□□ -1.09
CHD1-205ENST00000508756 OR2W5A6NFC9 320 aa8.24□□□□□ -1.09
CHD1-205ENST00000508756 CGB1A6NKQ9 187 aa8.24□□□□□ -1.09
CHD1-205ENST00000508756 HNRNPDLO14979 420 aaKnown RBP8.24□□□□□ -1.09
CHD1-205ENST00000508756 VIPP01282 170 aa8.24□□□□□ -1.09
CHD1-205ENST00000508756 SRGAP2BP0DMP2 458 aa8.24□□□□□ -1.09
CHD1-205ENST00000508756 BTKQ06187 659 aa8.24□□□□□ -1.09
CHD1-205ENST00000508756 NSUN2Q08J23 767 aaKnown RBP eCLIP8.24□□□□□ -1.09
CHD1-205ENST00000508756 CCDC142Q17RM4 750 aa8.24□□□□□ -1.09
CHD1-205ENST00000508756 TMEM196Q5HYL7 178 aa8.24□□□□□ -1.09
CHD1-205ENST00000508756 TMEM65Q6PI78 240 aa8.24□□□□□ -1.09
CHD1-205ENST00000508756 DCDC5Q6ZRR9 648 aa8.24□□□□□ -1.09
CHD1-205ENST00000508756 TOGARAM2Q6ZUX3 1019 aa8.24□□□□□ -1.09
CHD1-205ENST00000508756 SYTL1Q8IYJ3 562 aa8.24□□□□□ -1.09
CHD1-205ENST00000508756 C12orf76Q8N812 135 aaPredicted RBP8.24□□□□□ -1.09
CHD1-205ENST00000508756 MUL1Q969V5 352 aa8.24□□□□□ -1.09
CHD1-205ENST00000508756 CCDC17Q96LX7 622 aa8.24□□□□□ -1.09
CHD1-205ENST00000508756 HS6ST2Q96MM7 605 aa8.24□□□□□ -1.09
CHD1-205ENST00000508756 FYTTD1Q96QD9 318 aaKnown RBP8.24□□□□□ -1.09
CHD1-205ENST00000508756 ARFGAP3Q9NP61 516 aa8.24□□□□□ -1.09
CHD1-205ENST00000508756 NECTIN3Q9NQS3 549 aa8.24□□□□□ -1.09
CHD1-205ENST00000508756 UBE2Q2LH0YL09 131 aa8.23□□□□□ -1.09
CHD1-205ENST00000508756 LATS1O95835 1130 aa8.23□□□□□ -1.09
CHD1-205ENST00000508756 CYP2D6P10635 497 aa8.23□□□□□ -1.09
CHD1-205ENST00000508756 IL6STP40189 918 aaPredicted RBP8.23□□□□□ -1.09
CHD1-205ENST00000508756 HTR3AP46098 478 aa8.23□□□□□ -1.09
CHD1-205ENST00000508756 CFHR3Q02985 330 aa8.23□□□□□ -1.09
CHD1-205ENST00000508756 SRSF4Q08170 494 aaKnown RBP8.23□□□□□ -1.09
CHD1-205ENST00000508756 LARS2Q15031 903 aaKnown RBP8.23□□□□□ -1.09
CHD1-205ENST00000508756 BRD3Q15059 726 aa8.23□□□□□ -1.09
CHD1-205ENST00000508756 CERKLQ49MI3 558 aaPredicted RBP8.23□□□□□ -1.09
CHD1-205ENST00000508756 COLEC12Q5KU26 742 aa8.23□□□□□ -1.09
CHD1-205ENST00000508756 ADAMTS18Q8TE60 1221 aa8.23□□□□□ -1.09
CHD1-205ENST00000508756 KAZALD1Q96I82 304 aa8.23□□□□□ -1.09
CHD1-205ENST00000508756 TM7SF3Q9NS93 570 aa8.23□□□□□ -1.09
CHD1-205ENST00000508756 SLC52A1Q9NWF4 448 aa8.23□□□□□ -1.09
CHD1-205ENST00000508756 IGSF9Q9P2J2 1179 aa8.23□□□□□ -1.09
CHD1-205ENST00000508756 PCDHB2Q9Y5E7 798 aa8.23□□□□□ -1.09
CHD1-205ENST00000508756 BTBD19C9JJ37 291 aa8.22□□□□□ -1.09
CHD1-205ENST00000508756 USP1O94782 785 aa8.22□□□□□ -1.09
CHD1-205ENST00000508756 CHRM5P08912 532 aaPredicted RBP8.22□□□□□ -1.09
CHD1-205ENST00000508756 CYP2A6P11509 494 aaPredicted RBP8.22□□□□□ -1.09
CHD1-205ENST00000508756 ATF7P17544 494 aaPredicted RBP8.22□□□□□ -1.09
CHD1-205ENST00000508756 MPGP29372 298 aa8.22□□□□□ -1.09
CHD1-205ENST00000508756 TECP42680 631 aa8.22□□□□□ -1.09
CHD1-205ENST00000508756 BFSP2Q13515 415 aa8.22□□□□□ -1.09
CHD1-205ENST00000508756 DNASE1L3Q13609 305 aa8.22□□□□□ -1.09
CHD1-205ENST00000508756 KCNJ12Q14500 433 aa8.22□□□□□ -1.09
CHD1-205ENST00000508756 KCNB1Q14721 858 aa8.22□□□□□ -1.09
CHD1-205ENST00000508756 STARD3Q14849 445 aa8.22□□□□□ -1.09
CHD1-205ENST00000508756 MFSD13AQ14CX5 517 aa8.22□□□□□ -1.09
CHD1-205ENST00000508756 FAM71DQ8N9W8 422 aa8.22□□□□□ -1.09
CHD1-205ENST00000508756 C5orf34Q96MH7 638 aa8.22□□□□□ -1.09
CHD1-205ENST00000508756 MPHOSPH6Q99547 160 aaKnown RBP8.22□□□□□ -1.09
CHD1-205ENST00000508756 TTLL2Q9BWV7 592 aa8.22□□□□□ -1.09
CHD1-205ENST00000508756 DTNAQ9Y4J8 743 aa8.22□□□□□ -1.09
CHD1-205ENST00000508756 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.21□□□□□ -1.1
CHD1-205ENST00000508756 CLIC1O00299 241 aa8.21□□□□□ -1.1
CHD1-205ENST00000508756 ADAMTS3O15072 1205 aa8.21□□□□□ -1.1
CHD1-205ENST00000508756 FYB1O15117 783 aa8.21□□□□□ -1.1
CHD1-205ENST00000508756 MBPP02686 304 aaPredicted RBP8.21□□□□□ -1.1
CHD1-205ENST00000508756 SETSIPP0DME0 302 aa8.21□□□□□ -1.1
CHD1-205ENST00000508756 TMIGD3P0DMS9 266 aaPredicted RBP8.21□□□□□ -1.1
CHD1-205ENST00000508756 GALNSP34059 522 aa8.21□□□□□ -1.1
CHD1-205ENST00000508756 DGKQP52824 942 aa8.21□□□□□ -1.1
CHD1-205ENST00000508756 RAE1P78406 368 aaKnown RBP8.21□□□□□ -1.1
CHD1-205ENST00000508756 CCDC15Q0P6D6 951 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms