RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 DLATP10515 647 aaKnown RBP10.46□□□□□ -0.73
NEDD9-210ENST00000505589 HLA-EP13747 358 aa10.46□□□□□ -0.73
NEDD9-210ENST00000505589 MAOBP27338 520 aa10.46□□□□□ -0.73
NEDD9-210ENST00000505589 HNF1BP35680 557 aa10.46□□□□□ -0.73
NEDD9-210ENST00000505589 STAT6P42226 847 aa10.46□□□□□ -0.73
NEDD9-210ENST00000505589 GRK6P43250 576 aa10.46□□□□□ -0.73
NEDD9-210ENST00000505589 ABCG1P45844 678 aa10.46□□□□□ -0.73
NEDD9-210ENST00000505589 SLC5A3P53794 718 aa10.46□□□□□ -0.73
NEDD9-210ENST00000505589 CDH8P55286 799 aa10.46□□□□□ -0.73
NEDD9-210ENST00000505589 WNT7BP56706 349 aa10.46□□□□□ -0.73
NEDD9-210ENST00000505589 ORC1Q13415 861 aa10.46□□□□□ -0.73
NEDD9-210ENST00000505589 EIF4HQ15056 248 aaKnown RBP10.46□□□□□ -0.73
NEDD9-210ENST00000505589 SNRNP35Q16560 246 aaKnown RBP10.46□□□□□ -0.73
NEDD9-210ENST00000505589 HLA-BQ31612 363 aa10.46□□□□□ -0.73
NEDD9-210ENST00000505589 DCAF12L1Q5VU92 463 aa10.46□□□□□ -0.73
NEDD9-210ENST00000505589 TPGS1Q6ZTW0 290 aa10.46□□□□□ -0.73
NEDD9-210ENST00000505589 TMPRSS6Q8IU80 811 aa10.46□□□□□ -0.73
NEDD9-210ENST00000505589 ZNF276Q8N554 614 aa10.46□□□□□ -0.73
NEDD9-210ENST00000505589 XXYLT1Q8NBI6 393 aa10.46□□□□□ -0.73
NEDD9-210ENST00000505589 OR2I1PQ8NGU4 316 aa10.46□□□□□ -0.73
NEDD9-210ENST00000505589 ZFRQ96KR1 1074 aaKnown RBP10.46□□□□□ -0.73
NEDD9-210ENST00000505589 KCNK16Q96T55 309 aa10.46□□□□□ -0.73
NEDD9-210ENST00000505589 ZNF518BQ9C0D4 1074 aa10.46□□□□□ -0.73
NEDD9-210ENST00000505589 VRTNQ9H8Y1 702 aa10.46□□□□□ -0.73
NEDD9-210ENST00000505589 OSGEPQ9NPF4 335 aa10.46□□□□□ -0.73
NEDD9-210ENST00000505589 HSPBP1Q9NZL4 362 aa10.46□□□□□ -0.73
NEDD9-210ENST00000505589 USP36Q9P275 1121 aaKnown RBP10.46□□□□□ -0.73
NEDD9-210ENST00000505589 NXF1Q9UBU9 619 aaKnown RBP10.46□□□□□ -0.73
NEDD9-210ENST00000505589 DNMT3LQ9UJW3 386 aa10.46□□□□□ -0.73
NEDD9-210ENST00000505589 FBXO10Q9UK96 956 aa10.46□□□□□ -0.73
NEDD9-210ENST00000505589 STON1Q9Y6Q2 735 aa10.46□□□□□ -0.73
NEDD9-210ENST00000505589 TNRC6BQ9UPQ9 1833 aaKnown RBP10.46□□□□□ -0.74
NEDD9-210ENST00000505589 HELZP42694 1942 aaKnown RBP10.46□□□□□ -0.74
NEDD9-210ENST00000505589 PKD1L2Q7Z442 2459 aa10.46□□□□□ -0.74
NEDD9-210ENST00000505589 PRRT4C9JH25 899 aa10.45□□□□□ -0.74
NEDD9-210ENST00000505589 SCAMP3O14828 347 aaKnown RBP10.45□□□□□ -0.74
NEDD9-210ENST00000505589 AP1G2O75843 785 aa10.45□□□□□ -0.74
NEDD9-210ENST00000505589 DKK1O94907 266 aa10.45□□□□□ -0.74
NEDD9-210ENST00000505589 CLSTN1O94985 981 aa10.45□□□□□ -0.74
NEDD9-210ENST00000505589 ATXN8OSP0DMR3 200 aa10.45□□□□□ -0.74
NEDD9-210ENST00000505589 IRF1P10914 325 aa10.45□□□□□ -0.74
NEDD9-210ENST00000505589 RALAP11233 206 aa10.45□□□□□ -0.74
NEDD9-210ENST00000505589 PSMD6Q15008 389 aa10.45□□□□□ -0.74
NEDD9-210ENST00000505589 CCDC142Q17RM4 750 aa10.45□□□□□ -0.74
NEDD9-210ENST00000505589 ZNF667Q5HYK9 610 aa10.45□□□□□ -0.74
NEDD9-210ENST00000505589 C6orf118Q5T5N4 469 aa10.45□□□□□ -0.74
NEDD9-210ENST00000505589 UNC93AQ86WB7 457 aa10.45□□□□□ -0.74
NEDD9-210ENST00000505589 CBWD2Q8IUF1 395 aa10.45□□□□□ -0.74
NEDD9-210ENST00000505589 RDH13Q8NBN7 331 aa10.45□□□□□ -0.74
NEDD9-210ENST00000505589 ZSWIM2Q8NEG5 633 aa10.45□□□□□ -0.74
NEDD9-210ENST00000505589 KLF16Q9BXK1 252 aaPredicted RBP10.45□□□□□ -0.74
NEDD9-210ENST00000505589 SLC2A11Q9BYW1 496 aa10.45□□□□□ -0.74
NEDD9-210ENST00000505589 TNMDQ9H2S6 317 aa10.45□□□□□ -0.74
NEDD9-210ENST00000505589 CUEDC2Q9H467 287 aa10.45□□□□□ -0.74
NEDD9-210ENST00000505589 CCSER2Q9H7U1 834 aa10.45□□□□□ -0.74
NEDD9-210ENST00000505589 FBRSQ9HAH7 460 aa10.45□□□□□ -0.74
NEDD9-210ENST00000505589 CD248Q9HCU0 757 aa10.45□□□□□ -0.74
NEDD9-210ENST00000505589 CYLDQ9NQC7 956 aa10.45□□□□□ -0.74
NEDD9-210ENST00000505589 CACNA2D2Q9NY47 1150 aa10.45□□□□□ -0.74
NEDD9-210ENST00000505589 THAP10Q9P2Z0 257 aaPredicted RBP10.45□□□□□ -0.74
NEDD9-210ENST00000505589 CACNA1EQ15878 2313 aa10.45□□□□□ -0.74
NEDD9-210ENST00000505589 ADAMTS9Q9P2N4 1935 aa10.45□□□□□ -0.74
NEDD9-210ENST00000505589 ANKRD11Q6UB99 2663 aaPredicted RBP10.44□□□□□ -0.74
NEDD9-210ENST00000505589 SMG1Q96Q15 3661 aaKnown RBP10.44□□□□□ -0.74
NEDD9-210ENST00000505589 URB1O60287 2271 aaKnown RBP10.44□□□□□ -0.74
NEDD9-210ENST00000505589 FREM2Q5SZK8 3169 aa10.44□□□□□ -0.74
NEDD9-210ENST00000505589 CLDN5O00501 218 aa10.44□□□□□ -0.74
NEDD9-210ENST00000505589 STX6O43752 255 aa10.44□□□□□ -0.74
NEDD9-210ENST00000505589 IGLV3-19P01714 112 aa10.44□□□□□ -0.74
NEDD9-210ENST00000505589 RPN1P04843 607 aaKnown RBP10.44□□□□□ -0.74
NEDD9-210ENST00000505589 CISD3P0C7P0 127 aa10.44□□□□□ -0.74
NEDD9-210ENST00000505589 ACO1P21399 889 aaKnown RBP10.44□□□□□ -0.74
NEDD9-210ENST00000505589 ANP32AP39687 249 aaKnown RBP10.44□□□□□ -0.74
NEDD9-210ENST00000505589 TPMTP51580 245 aa10.44□□□□□ -0.74
NEDD9-210ENST00000505589 ZBTB16Q05516 673 aa10.44□□□□□ -0.74
NEDD9-210ENST00000505589 CYP4F3Q08477 520 aa10.44□□□□□ -0.74
NEDD9-210ENST00000505589 PDE4CQ08493 712 aa10.44□□□□□ -0.74
NEDD9-210ENST00000505589 SMAD1Q15797 465 aaKnown RBP10.44□□□□□ -0.74
NEDD9-210ENST00000505589 BMT2Q1RMZ1 405 aa10.44□□□□□ -0.74
NEDD9-210ENST00000505589 SGSM1Q2NKQ1 1148 aa10.44□□□□□ -0.74
NEDD9-210ENST00000505589 MIB1Q86YT6 1006 aa10.44□□□□□ -0.74
NEDD9-210ENST00000505589 CRYBG2Q8N1P7 616 aa10.44□□□□□ -0.74
NEDD9-210ENST00000505589 ZCCHC9Q8N567 271 aaKnown RBP10.44□□□□□ -0.74
NEDD9-210ENST00000505589 SCAMP5Q8TAC9 235 aa10.44□□□□□ -0.74
NEDD9-210ENST00000505589 GOLGA5Q8TBA6 731 aa10.44□□□□□ -0.74
NEDD9-210ENST00000505589 BAHD1Q8TBE0 780 aaPredicted RBP10.44□□□□□ -0.74
NEDD9-210ENST00000505589 ZNF507Q8TCN5 953 aa10.44□□□□□ -0.74
NEDD9-210ENST00000505589 BAP1Q92560 729 aa10.44□□□□□ -0.74
NEDD9-210ENST00000505589 TAF4BQ92750 862 aa10.44□□□□□ -0.74
NEDD9-210ENST00000505589 IGSF8Q969P0 613 aa10.44□□□□□ -0.74
NEDD9-210ENST00000505589 CCDC127Q96BQ5 260 aa10.44□□□□□ -0.74
NEDD9-210ENST00000505589 TMX3Q96JJ7 454 aa10.44□□□□□ -0.74
NEDD9-210ENST00000505589 ACOX2Q99424 681 aa10.44□□□□□ -0.74
NEDD9-210ENST00000505589 CGRRF1Q99675 332 aa10.44□□□□□ -0.74
NEDD9-210ENST00000505589 IKZF4Q9H2S9 585 aa10.44□□□□□ -0.74
NEDD9-210ENST00000505589 CSNK1G1Q9HCP0 422 aa10.44□□□□□ -0.74
NEDD9-210ENST00000505589 PNPLA8Q9NP80 782 aa10.44□□□□□ -0.74
NEDD9-210ENST00000505589 EIF2B4Q9UI10 523 aaKnown RBP10.44□□□□□ -0.74
NEDD9-210ENST00000505589 PLA2G4CQ9UP65 541 aa10.44□□□□□ -0.74
NEDD9-210ENST00000505589 SCML2Q9UQR0 700 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms