RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 PI4K2BQ8TCG2 481 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 AS3MTQ9HBK9 375 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 NMT1P30419 496 aaKnown RBP6.25□□□□□ -1.41
LINC02397-201ENST00000504409 CYP2J2P51589 502 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 C4orf50Q6ZRC1 276 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 NLRX1Q86UT6 975 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 C8orf58Q8NAV2 365 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 GAL3ST1Q99999 423 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 EMILIN2Q9BXX0 1053 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 TRMT13Q9NUP7 481 aaKnown RBP6.25□□□□□ -1.41
LINC02397-201ENST00000504409 MYH9P35579 1960 aaKnown RBP6.25□□□□□ -1.41
LINC02397-201ENST00000504409 A0A0G2JPF8 293 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 HNRNPCL3B7ZW38 293 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 SASH3O75995 380 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 H6PDO95479 791 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 HNRNPCL4P0DMR1 293 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 ATP1A3P13637 1013 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 GABPAQ06546 454 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 PPARAQ07869 468 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 TFDP1Q14186 410 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 ARHGAP17Q68EM7 881 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 ZNF786Q8N393 782 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 PLEKHA8Q96JA3 519 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 NEUROG2Q9H2A3 272 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 GPCPD1Q9NPB8 672 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 SNX7Q9UNH6 387 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 ZNF330Q9Y3S2 320 aaPredicted RBP6.25□□□□□ -1.41
LINC02397-201ENST00000504409 NCANO14594 1321 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 TARBP1Q13395 1621 aaKnown RBP6.25□□□□□ -1.41
LINC02397-201ENST00000504409 PIK3C2AO00443 1686 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 AKAP12Q02952 1782 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 MEI4A8MW99 385 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 PSMD11O00231 422 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 WWP2O00308 870 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 KMOO15229 486 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 RIPK2O43353 540 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 HOXC6P09630 235 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 TRAPPC2P0DI81 140 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 TRAPPC2BP0DI82 140 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 TARSP26639 723 aaKnown RBP6.25□□□□□ -1.41
LINC02397-201ENST00000504409 CCND2P30279 289 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 MAPK9P45984 424 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 NME5P56597 212 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 IL1RL1Q01638 556 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 CDCA2Q69YH5 1023 aaPredicted RBP6.25□□□□□ -1.41
LINC02397-201ENST00000504409 DENND5AQ6IQ26 1287 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 ZC3H12CQ9C0D7 883 aaKnown RBP6.25□□□□□ -1.41
LINC02397-201ENST00000504409 POLG2Q9UHN1 485 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 FAM32AQ9Y421 112 aaKnown RBP6.25□□□□□ -1.41
LINC02397-201ENST00000504409 TUBAL3A6NHL2 446 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 OATP04181 439 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 ENO1P06733 434 aaKnown RBP6.25□□□□□ -1.41
LINC02397-201ENST00000504409 FDX1P10109 184 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 RASA1P20936 1047 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 MAGEA3P43357 314 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 SLC29A2Q14542 456 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 FGD2Q7Z6J4 655 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 SLC30A8Q8IWU4 369 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 MYLPFQ96A32 169 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 SRPK1Q96SB4 655 aaKnown RBP6.25□□□□□ -1.41
LINC02397-201ENST00000504409 ZNF696Q9H7X3 374 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 DDX43Q9NXZ2 648 aaKnown RBP6.25□□□□□ -1.41
LINC02397-201ENST00000504409 MED11Q9P086 117 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 METP08581 1390 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 NOTOA8MTQ0 251 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 CRABP2P29373 138 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 RPL3P39023 403 aaKnown RBP6.25□□□□□ -1.41
LINC02397-201ENST00000504409 CDH4P55283 916 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 SRP54P61011 504 aaKnown RBP6.25□□□□□ -1.41
LINC02397-201ENST00000504409 VAC14Q08AM6 782 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 PTK7Q13308 1070 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 MYBPC3Q14896 1274 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 PSMD5Q16401 504 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 CMTR1Q8N1G2 835 aaKnown RBP6.25□□□□□ -1.41
LINC02397-201ENST00000504409 RBM17Q96I25 401 aaKnown RBP6.25□□□□□ -1.41
LINC02397-201ENST00000504409 HSPE1-MOB4S4R3N1 261 aa6.25□□□□□ -1.41
LINC02397-201ENST00000504409 KBTBD13C9JR72 458 aa6.24□□□□□ -1.41
LINC02397-201ENST00000504409 ATMINO43313 823 aaPredicted RBP6.24□□□□□ -1.41
LINC02397-201ENST00000504409 SDC2P34741 201 aa6.24□□□□□ -1.41
LINC02397-201ENST00000504409 HNF4AP41235 474 aa6.24□□□□□ -1.41
LINC02397-201ENST00000504409 FOXM1Q08050 763 aa6.24□□□□□ -1.41
LINC02397-201ENST00000504409 CCNJQ5T5M9 372 aa6.24□□□□□ -1.41
LINC02397-201ENST00000504409 LIN54Q6MZP7 749 aa6.24□□□□□ -1.41
LINC02397-201ENST00000504409 DARS2Q6PI48 645 aaKnown RBP6.24□□□□□ -1.41
LINC02397-201ENST00000504409 USP43Q70EL4 1123 aa6.24□□□□□ -1.41
LINC02397-201ENST00000504409 CNTD1Q8N815 330 aa6.24□□□□□ -1.41
LINC02397-201ENST00000504409 BTF3L4Q96K17 158 aa6.24□□□□□ -1.41
LINC02397-201ENST00000504409 TBCBQ99426 244 aa6.24□□□□□ -1.41
LINC02397-201ENST00000504409 SIX4Q9UIU6 781 aa6.24□□□□□ -1.41
LINC02397-201ENST00000504409 USP20Q9Y2K6 914 aa6.24□□□□□ -1.41
LINC02397-201ENST00000504409 OPLAHO14841 1288 aa6.24□□□□□ -1.41
LINC02397-201ENST00000504409 ZBTB5O15062 677 aa6.24□□□□□ -1.41
LINC02397-201ENST00000504409 SEC24AO95486 1093 aa6.24□□□□□ -1.41
LINC02397-201ENST00000504409 LDLRP01130 860 aa6.24□□□□□ -1.41
LINC02397-201ENST00000504409 NPPAP01160 153 aa6.24□□□□□ -1.41
LINC02397-201ENST00000504409 CSTF2P33240 577 aaKnown RBP eCLIP6.24□□□□□ -1.41
LINC02397-201ENST00000504409 VPS72Q15906 364 aa6.24□□□□□ -1.41
LINC02397-201ENST00000504409 MCPH1Q8NEM0 835 aa6.24□□□□□ -1.41
LINC02397-201ENST00000504409 L3MBTL3Q96JM7 780 aaPredicted RBP6.24□□□□□ -1.41
LINC02397-201ENST00000504409 SAV1Q9H4B6 383 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms