RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 FTSJ3Q8IY81 847 aaKnown RBP5.67□□□□□ -1.5
TRAPPC13-205ENST00000504243 SIRT6Q8N6T7 355 aa5.67□□□□□ -1.5
TRAPPC13-205ENST00000504243 STT3BQ8TCJ2 826 aa5.67□□□□□ -1.5
TRAPPC13-205ENST00000504243 HMGB4Q8WW32 186 aa5.67□□□□□ -1.5
TRAPPC13-205ENST00000504243 EVI5LQ96CN4 794 aa5.67□□□□□ -1.5
TRAPPC13-205ENST00000504243 PBKQ96KB5 322 aa5.67□□□□□ -1.5
TRAPPC13-205ENST00000504243 NUDT22Q9BRQ3 303 aa5.67□□□□□ -1.5
TRAPPC13-205ENST00000504243 PABPC3Q9H361 631 aaKnown RBP5.67□□□□□ -1.5
TRAPPC13-205ENST00000504243 FSCN3Q9NQT6 498 aa5.67□□□□□ -1.5
TRAPPC13-205ENST00000504243 WDR33Q9C0J8 1336 aaKnown RBP5.67□□□□□ -1.5
TRAPPC13-205ENST00000504243 COL15A1P39059 1388 aa5.67□□□□□ -1.5
TRAPPC13-205ENST00000504243 EIF3FO00303 357 aaPredicted RBP5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 KIAA0355O15063 1070 aa5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 FOXN1O15353 648 aa5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 RAMP2O60895 175 aa5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 TAF5LO75529 589 aa5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 KRT38O76015 456 aa5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 URI1O94763 535 aaPredicted RBP5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 RHOBTB3O94955 611 aa5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 CER1O95813 267 aa5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 TTLL1O95922 423 aa5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 EBLN1P0CF75 366 aa5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 ZNF37AP17032 561 aaPredicted RBP5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 GKP32189 559 aa5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 HTR7P34969 479 aa5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 AARSP49588 968 aaKnown RBP eCLIP5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 E2F1Q01094 437 aa5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 RNASELQ05823 741 aaKnown RBP5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 SEMA3BQ13214 749 aa5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 FHL3Q13643 280 aa5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 NBPF8Q3BBV2 869 aa5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 ALFQ53S48 1182 aa5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 L1TD1Q5T7N2 865 aaKnown RBP5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 TANGO2Q6ICL3 276 aa5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 PARS2Q7L3T8 475 aaKnown RBP5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 ZNF551Q7Z340 670 aaPredicted RBP5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 MOGAT3Q86VF5 341 aa5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 LDLRAD3Q86YD5 345 aa5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 C2CD5Q86YS7 1000 aa5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 CSGALNACT1Q8TDX6 532 aa5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 ACTRT2Q8TDY3 377 aa5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 COQ10AQ96MF6 247 aa5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 PRR25Q96S07 402 aa5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 KRTAP4-2Q9BYR5 136 aa5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 CCDC134Q9H6E4 229 aa5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 TRIM36Q9NQ86 728 aa5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 PRDM8Q9NQV8 689 aa5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 FBXO28Q9NVF7 368 aa5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 C9orf78Q9NZ63 289 aaPredicted RBP5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 MGAT4CQ9UBM8 478 aa5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 SRP68Q9UHB9 627 aaKnown RBP5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 ST3GAL5Q9UNP4 418 aa5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 COL4A3Q01955 1670 aa5.66□□□□□ -1.5
TRAPPC13-205ENST00000504243 EFCAB8A8MWE9 144 aa5.65□□□□□ -1.5
TRAPPC13-205ENST00000504243 KIF28PB7ZC32 967 aa5.65□□□□□ -1.5
TRAPPC13-205ENST00000504243 RXRAP19793 462 aa5.65□□□□□ -1.5
TRAPPC13-205ENST00000504243 DGKQP52824 942 aa5.65□□□□□ -1.5
TRAPPC13-205ENST00000504243 PRKAA2P54646 552 aa5.65□□□□□ -1.5
TRAPPC13-205ENST00000504243 MPP3Q13368 585 aa5.65□□□□□ -1.5
TRAPPC13-205ENST00000504243 CUL4BQ13620 913 aa5.65□□□□□ -1.5
TRAPPC13-205ENST00000504243 ACOX1Q15067 660 aa5.65□□□□□ -1.5
TRAPPC13-205ENST00000504243 TBC1D25Q3MII6 688 aa5.65□□□□□ -1.5
TRAPPC13-205ENST00000504243 DENND2CQ68D51 928 aa5.65□□□□□ -1.5
TRAPPC13-205ENST00000504243 ANKRD40Q6AI12 368 aa5.65□□□□□ -1.5
TRAPPC13-205ENST00000504243 NFRKBQ6P4R8 1299 aa5.65□□□□□ -1.5
TRAPPC13-205ENST00000504243 Q6ZPA2 131 aa5.65□□□□□ -1.5
TRAPPC13-205ENST00000504243 PEG10Q86TG7 708 aaKnown RBP5.65□□□□□ -1.5
TRAPPC13-205ENST00000504243 VRK3Q8IV63 474 aa5.65□□□□□ -1.5
TRAPPC13-205ENST00000504243 RFKQ969G6 155 aa5.65□□□□□ -1.5
TRAPPC13-205ENST00000504243 RILPL2Q969X0 211 aa5.65□□□□□ -1.5
TRAPPC13-205ENST00000504243 RSPRY1Q96DX4 576 aa5.65□□□□□ -1.5
TRAPPC13-205ENST00000504243 TTPALQ9BTX7 342 aa5.65□□□□□ -1.5
TRAPPC13-205ENST00000504243 AMFRQ9UKV5 643 aa5.65□□□□□ -1.5
TRAPPC13-205ENST00000504243 DAPP1Q9UN19 280 aa5.65□□□□□ -1.5
TRAPPC13-205ENST00000504243 VPS4AQ9UN37 437 aa5.65□□□□□ -1.5
TRAPPC13-205ENST00000504243 SH2B3Q9UQQ2 575 aa5.65□□□□□ -1.5
TRAPPC13-205ENST00000504243 PCDHB7Q9Y5E2 793 aa5.65□□□□□ -1.5
TRAPPC13-205ENST00000504243 A0A087X1B8 175 aa5.64□□□□□ -1.51
TRAPPC13-205ENST00000504243 H0Y3Z8 333 aa5.64□□□□□ -1.51
TRAPPC13-205ENST00000504243 CA12O43570 354 aa5.64□□□□□ -1.51
TRAPPC13-205ENST00000504243 WDHD1O75717 1129 aaPredicted RBP5.64□□□□□ -1.51
TRAPPC13-205ENST00000504243 RPP40O75818 363 aaKnown RBP5.64□□□□□ -1.51
TRAPPC13-205ENST00000504243 GCP02774 474 aa5.64□□□□□ -1.51
TRAPPC13-205ENST00000504243 NPSP0C0P6 89 aa5.64□□□□□ -1.51
TRAPPC13-205ENST00000504243 KRT4P19013 534 aa5.64□□□□□ -1.51
TRAPPC13-205ENST00000504243 TGM1P22735 817 aa5.64□□□□□ -1.51
TRAPPC13-205ENST00000504243 CST5P28325 142 aaPredicted RBP5.64□□□□□ -1.51
TRAPPC13-205ENST00000504243 PAPOLAP51003 745 aaKnown RBP5.64□□□□□ -1.51
TRAPPC13-205ENST00000504243 PNLIPRP1P54315 467 aa5.64□□□□□ -1.51
TRAPPC13-205ENST00000504243 POU5F1BQ06416 359 aa5.64□□□□□ -1.51
TRAPPC13-205ENST00000504243 CCDC70Q6NSX1 233 aa5.64□□□□□ -1.51
TRAPPC13-205ENST00000504243 CCDC144NLQ6NUI1 221 aa5.64□□□□□ -1.51
TRAPPC13-205ENST00000504243 Q6ZWC4 215 aa5.64□□□□□ -1.51
TRAPPC13-205ENST00000504243 ABHD11Q8NFV4 315 aa5.64□□□□□ -1.51
TRAPPC13-205ENST00000504243 OR6Y1Q8NGX8 325 aa5.64□□□□□ -1.51
TRAPPC13-205ENST00000504243 SLC22A17Q8WUG5 538 aa5.64□□□□□ -1.51
TRAPPC13-205ENST00000504243 CPT1BQ92523 772 aa5.64□□□□□ -1.51
TRAPPC13-205ENST00000504243 RSC1A1Q92681 617 aa5.64□□□□□ -1.51
TRAPPC13-205ENST00000504243 CHFRQ96EP1 664 aa5.64□□□□□ -1.51
TRAPPC13-205ENST00000504243 REXO5Q96IC2 774 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms