RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 SEPT3Q9UH03 358 aa13.33□□□□□ -0.28
LSM6-204ENST00000504181 NBASA2RRP1 2371 aa13.33□□□□□ -0.28
LSM6-204ENST00000504181 CDKL5O76039 1030 aa13.32□□□□□ -0.28
LSM6-204ENST00000504181 FSBPO95073 299 aa13.32□□□□□ -0.28
LSM6-204ENST00000504181 MT-CO3P00414 261 aa13.32□□□□□ -0.28
LSM6-204ENST00000504181 OR52Z1P0C646 297 aa13.32□□□□□ -0.28
LSM6-204ENST00000504181 PLS3P13797 630 aa13.32□□□□□ -0.28
LSM6-204ENST00000504181 DGKGP49619 791 aa13.32□□□□□ -0.28
LSM6-204ENST00000504181 ACOT2P49753 483 aa13.32□□□□□ -0.28
LSM6-204ENST00000504181 PSMC1P62191 440 aaKnown RBP13.32□□□□□ -0.28
LSM6-204ENST00000504181 TAF10Q12962 218 aa13.32□□□□□ -0.28
LSM6-204ENST00000504181 ILKQ13418 452 aa13.32□□□□□ -0.28
LSM6-204ENST00000504181 SHBQ15464 509 aa13.32□□□□□ -0.28
LSM6-204ENST00000504181 C4orf50Q6ZRC1 276 aa13.32□□□□□ -0.28
LSM6-204ENST00000504181 C1orf186Q6ZWK4 172 aa13.32□□□□□ -0.28
LSM6-204ENST00000504181 SAP25Q8TEE9 199 aa13.32□□□□□ -0.28
LSM6-204ENST00000504181 MYLPFQ96A32 169 aa13.32□□□□□ -0.28
LSM6-204ENST00000504181 ASB7Q9H672 318 aa13.32□□□□□ -0.28
LSM6-204ENST00000504181 STARD5Q9NSY2 213 aa13.32□□□□□ -0.28
LSM6-204ENST00000504181 ADAMTS1Q9UHI8 967 aa13.32□□□□□ -0.28
LSM6-204ENST00000504181 C2CD2Q9Y426 696 aa13.32□□□□□ -0.28
LSM6-204ENST00000504181 ZFC3H1O60293 1989 aaKnown RBP13.32□□□□□ -0.28
LSM6-204ENST00000504181 COCHO43405 550 aa13.31□□□□□ -0.28
LSM6-204ENST00000504181 SYNCRIPO60506 623 aaKnown RBP13.31□□□□□ -0.28
LSM6-204ENST00000504181 CD27P26842 260 aa13.31□□□□□ -0.28
LSM6-204ENST00000504181 PSMA5P28066 241 aa13.31□□□□□ -0.28
LSM6-204ENST00000504181 CDC25AP30304 524 aa13.31□□□□□ -0.28
LSM6-204ENST00000504181 FOSBP53539 338 aa13.31□□□□□ -0.28
LSM6-204ENST00000504181 ERVPABLB-1P60509 514 aa13.31□□□□□ -0.28
LSM6-204ENST00000504181 TLE1Q04724 770 aa13.31□□□□□ -0.28
LSM6-204ENST00000504181 VSTM1Q6UX27 236 aa13.31□□□□□ -0.28
LSM6-204ENST00000504181 CCDC81Q6ZN84 652 aa13.31□□□□□ -0.28
LSM6-204ENST00000504181 LSMEM2Q8N112 164 aa13.31□□□□□ -0.28
LSM6-204ENST00000504181 TMEM86AQ8N2M4 240 aa13.31□□□□□ -0.28
LSM6-204ENST00000504181 SNX29Q8TEQ0 813 aa13.31□□□□□ -0.28
LSM6-204ENST00000504181 BHMTQ93088 406 aa13.31□□□□□ -0.28
LSM6-204ENST00000504181 SLITRK1Q96PX8 696 aa13.31□□□□□ -0.28
LSM6-204ENST00000504181 ACE2Q9BYF1 805 aaPredicted RBP13.31□□□□□ -0.28
LSM6-204ENST00000504181 EHD2Q9NZN4 543 aa13.31□□□□□ -0.28
LSM6-204ENST00000504181 DNM3Q9UQ16 869 aa13.31□□□□□ -0.28
LSM6-204ENST00000504181 MAN2B2Q9Y2E5 1009 aa13.31□□□□□ -0.28
LSM6-204ENST00000504181 PTPRJQ12913 1337 aa13.31□□□□□ -0.28
LSM6-204ENST00000504181 A0A0B4J269 797 aa13.3□□□□□ -0.28
LSM6-204ENST00000504181 TULP1O00294 542 aaPredicted RBP13.3□□□□□ -0.28
LSM6-204ENST00000504181 USP12O75317 370 aa13.3□□□□□ -0.28
LSM6-204ENST00000504181 DXOO77932 396 aaKnown RBP13.3□□□□□ -0.28
LSM6-204ENST00000504181 SEMA4FO95754 770 aa13.3□□□□□ -0.28
LSM6-204ENST00000504181 CISD3P0C7P0 127 aa13.3□□□□□ -0.28
LSM6-204ENST00000504181 CKMT2P17540 419 aa13.3□□□□□ -0.28
LSM6-204ENST00000504181 PCSK1P29120 753 aa13.3□□□□□ -0.28
LSM6-204ENST00000504181 POLR2BP30876 1174 aaKnown RBP13.3□□□□□ -0.28
LSM6-204ENST00000504181 PNPLA4P41247 253 aa13.3□□□□□ -0.28
LSM6-204ENST00000504181 NOP14P78316 857 aaKnown RBP13.3□□□□□ -0.28
LSM6-204ENST00000504181 CYP27A1Q02318 531 aa13.3□□□□□ -0.28
LSM6-204ENST00000504181 LINC00303Q3SY05 128 aa13.3□□□□□ -0.28
LSM6-204ENST00000504181 TDRD10Q5VZ19 366 aaKnown RBP13.3□□□□□ -0.28
LSM6-204ENST00000504181 FAM171BQ6P995 826 aa13.3□□□□□ -0.28
LSM6-204ENST00000504181 RUFY3Q7L099 469 aa13.3□□□□□ -0.28
LSM6-204ENST00000504181 DIS3L2Q8IYB7 885 aaKnown RBP13.3□□□□□ -0.28
LSM6-204ENST00000504181 ADGRF2Q8IZF7 708 aa13.3□□□□□ -0.28
LSM6-204ENST00000504181 MMS19Q96T76 1030 aa13.3□□□□□ -0.28
LSM6-204ENST00000504181 SYT15Q9BQS2 421 aa13.3□□□□□ -0.28
LSM6-204ENST00000504181 ASCL3Q9NQ33 180 aa13.3□□□□□ -0.28
LSM6-204ENST00000504181 ORC3Q9UBD5 711 aaPredicted RBP13.3□□□□□ -0.28
LSM6-204ENST00000504181 LRRK1Q38SD2 2015 aa13.3□□□□□ -0.28
LSM6-204ENST00000504181 ITPR3Q14573 2671 aa13.29□□□□□ -0.28
LSM6-204ENST00000504181 F8VP50 259 aa13.29□□□□□ -0.28
LSM6-204ENST00000504181 VILLO15195 856 aa13.29□□□□□ -0.28
LSM6-204ENST00000504181 TSPAN3O60637 253 aa13.29□□□□□ -0.28
LSM6-204ENST00000504181 GUCY2CP25092 1073 aa13.29□□□□□ -0.28
LSM6-204ENST00000504181 EPHA8P29322 1005 aaPredicted RBP13.29□□□□□ -0.28
LSM6-204ENST00000504181 ZNF132P52740 706 aa13.29□□□□□ -0.28
LSM6-204ENST00000504181 NCKAP1LP55160 1127 aa13.29□□□□□ -0.28
LSM6-204ENST00000504181 CDH8P55286 799 aa13.29□□□□□ -0.28
LSM6-204ENST00000504181 BNIP3Q12983 259 aa13.29□□□□□ -0.28
LSM6-204ENST00000504181 ZNF174Q15697 407 aa13.29□□□□□ -0.28
LSM6-204ENST00000504181 SLC39A4Q6P5W5 647 aa13.29□□□□□ -0.28
LSM6-204ENST00000504181 KCNK18Q7Z418 384 aa13.29□□□□□ -0.28
LSM6-204ENST00000504181 CEP295NLQ96MC4 621 aa13.29□□□□□ -0.28
LSM6-204ENST00000504181 SLC6A18Q96N87 628 aa13.29□□□□□ -0.28
LSM6-204ENST00000504181 ORAI3Q9BRQ5 295 aa13.29□□□□□ -0.28
LSM6-204ENST00000504181 ARHGAP9Q9BRR9 750 aa13.29□□□□□ -0.28
LSM6-204ENST00000504181 CCSER2Q9H7U1 834 aa13.29□□□□□ -0.28
LSM6-204ENST00000504181 CRTAC1Q9NQ79 661 aa13.29□□□□□ -0.28
LSM6-204ENST00000504181 THSD1Q9NS62 852 aa13.29□□□□□ -0.28
LSM6-204ENST00000504181 PLK2Q9NYY3 685 aa13.29□□□□□ -0.28
LSM6-204ENST00000504181 THAP10Q9P2Z0 257 aaPredicted RBP13.29□□□□□ -0.28
LSM6-204ENST00000504181 AGAP1Q9UPQ3 857 aa13.29□□□□□ -0.28
LSM6-204ENST00000504181 SNX9Q9Y5X1 595 aa13.29□□□□□ -0.28
LSM6-204ENST00000504181 CRYBG3Q68DQ2 2970 aa13.28□□□□□ -0.28
LSM6-204ENST00000504181 BLACEA4D250 179 aa13.28□□□□□ -0.28
LSM6-204ENST00000504181 GABBR2O75899 941 aa13.28□□□□□ -0.28
LSM6-204ENST00000504181 WNT1P04628 370 aa13.28□□□□□ -0.28
LSM6-204ENST00000504181 ITGB3P05106 788 aa13.28□□□□□ -0.28
LSM6-204ENST00000504181 ITGB6P18564 788 aa13.28□□□□□ -0.28
LSM6-204ENST00000504181 ACP1P24666 158 aa13.28□□□□□ -0.28
LSM6-204ENST00000504181 PRKCHP24723 683 aa13.28□□□□□ -0.28
LSM6-204ENST00000504181 LSSP48449 732 aa13.28□□□□□ -0.28
LSM6-204ENST00000504181 LHX1P48742 406 aa13.28□□□□□ -0.28
LSM6-204ENST00000504181 BCAT1P54687 386 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms