RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 KRT12Q99456 494 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 RAD9AQ99638 391 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 SEPT5Q99719 369 aaPredicted RBP7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 FAM118BQ9BPY3 351 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 RHOXF2Q9BQY4 288 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 HTATIP2Q9BUP3 242 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 HEMGNQ9BXL5 484 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 OSBPL8Q9BZF1 889 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 DDX56Q9NY93 547 aaKnown RBP7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 GMIPQ9P107 970 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 DMGDHQ9UI17 866 aaKnown RBP7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 SCML2Q9UQR0 700 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 SLC4A7Q9Y6M7 1214 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 NOTCH4Q99466 2003 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 CHD7Q9P2D1 2997 aa7.2□□□□□ -1.26
TOPBP1-203ENST00000503464 CHD9Q3L8U1 2897 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 HELZP42694 1942 aaKnown RBP7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 A0A1W2PQH9 124 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 SLC38A8A6NNN8 435 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 CCDC188H7C350 402 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 M0QYT0 321 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 DYNC1I1O14576 645 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 TEX28O15482 410 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 SART1O43290 800 aaKnown RBP7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 TLL1O43897 1013 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 PHF2O75151 1096 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 ZMYND10O75800 440 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 URODP06132 367 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 ZDHHC11BP0C7U3 371 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 MYBL2P10244 700 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 CTSAP10619 480 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 NCAM1P13591 858 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 HMGA1P17096 107 aaKnown RBP7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 L1CAMP32004 1257 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 RDXP35241 583 aaKnown RBP7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 BMPR1AP36894 532 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 MAGEA10P43363 369 aaPredicted RBP7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 ERVFC1P60507 584 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 COPS2P61201 443 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 YWHAGP61981 247 aaKnown RBP eCLIP7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 VSNL1P62760 191 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 SLC7A5Q01650 507 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 SMARCB1Q12824 385 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 IFRD2Q12894 506 aaPredicted RBP7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 SEMA3BQ13214 749 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 CAMK1Q14012 370 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 RAB33AQ14088 237 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 SHHQ15465 462 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 TRADDQ15628 312 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 PPP2R5EQ16537 467 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 DPYSL2Q16555 572 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 HADHQ16836 314 aaKnown RBP7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 MGAT5BQ3V5L5 792 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 TFDP3Q5H9I0 405 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 KIAA1841Q6NSI8 718 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 SCYL2Q6P3W7 929 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 FBXO38Q6PIJ6 1188 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 FAM131BQ86XD5 332 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 CCDC50Q8IVM0 306 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 PYROXD2Q8N2H3 581 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 GPR161Q8N6U8 529 aaKnown RBP7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 PQLC3Q8N755 202 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 ZNF461Q8TAF7 563 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 SLC7A14Q8TBB6 771 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 DQX1Q8TE96 717 aaKnown RBP7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 GIPC2Q8TF65 315 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 C1orf54Q8WWF1 131 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 HSPH1Q92598 858 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 CASP10Q92851 521 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 FAF2Q96CS3 445 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 HS3ST6Q96QI5 342 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 KCTD15Q96SI1 283 aaPredicted RBP7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 HINFPQ9BQA5 517 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 C17orf80Q9BSJ5 609 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 ZBED2Q9BTP6 218 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 TTLL2Q9BWV7 592 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 PARD6BQ9BYG5 372 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 DCLK3Q9C098 648 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 SMOC2Q9H3U7 446 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 PLEKHA4Q9H4M7 779 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 LRRC19Q9H756 370 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 RXFP1Q9HBX9 757 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 PCDH18Q9HCL0 1135 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 FNIP2Q9P278 1114 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 AFF4Q9UHB7 1163 aaKnown RBP7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 NUDT5Q9UKK9 219 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 RAB21Q9UL25 225 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 FZD10Q9ULW2 581 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 NEU3Q9UQ49 428 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 NEU2Q9Y3R4 380 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 YIPF1Q9Y548 306 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 MYO7AQ13402 2215 aa7.19□□□□□ -1.26
TOPBP1-203ENST00000503464 CEP290O15078 2479 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 NYNRINQ9P2P1 1898 aaKnown RBP7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 SYNJ2BP-COX16A0A087WUM0 186 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 ESYT3A0FGR9 886 aa7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 TARSL2A2RTX5 802 aaKnown RBP7.18□□□□□ -1.26
TOPBP1-203ENST00000503464 HIDE1A8MVS5 230 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms