RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 NBPF8Q3BBV2 869 aa5.95□□□□□ -1.46
HMGB1P3-201ENST00000502802 GPATCH4Q5T3I0 446 aaKnown RBP5.95□□□□□ -1.46
HMGB1P3-201ENST00000502802 CCDC30Q5VVM6 783 aa5.95□□□□□ -1.46
HMGB1P3-201ENST00000502802 ACAD10Q6JQN1 1059 aa5.95□□□□□ -1.46
HMGB1P3-201ENST00000502802 CCDC144NLQ6NUI1 221 aa5.95□□□□□ -1.46
HMGB1P3-201ENST00000502802 ARMC6Q6NXE6 501 aa5.95□□□□□ -1.46
HMGB1P3-201ENST00000502802 KRT27Q7Z3Y8 459 aa5.95□□□□□ -1.46
HMGB1P3-201ENST00000502802 RAB11FIP4Q86YS3 637 aa5.95□□□□□ -1.46
HMGB1P3-201ENST00000502802 OR4N4Q8N0Y3 316 aa5.95□□□□□ -1.46
HMGB1P3-201ENST00000502802 CCDC89Q8N998 374 aa5.95□□□□□ -1.46
HMGB1P3-201ENST00000502802 SUPT20HQ8NEM7 779 aa5.95□□□□□ -1.46
HMGB1P3-201ENST00000502802 CENPIQ92674 756 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P3-201ENST00000502802 RSPRY1Q96DX4 576 aa5.95□□□□□ -1.46
HMGB1P3-201ENST00000502802 KTI12Q96EK9 354 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P3-201ENST00000502802 TOX2Q96NM4 488 aa5.95□□□□□ -1.46
HMGB1P3-201ENST00000502802 SSBP3Q9BWW4 388 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P3-201ENST00000502802 SERHL2Q9H4I8 314 aa5.95□□□□□ -1.46
HMGB1P3-201ENST00000502802 ZNF768Q9H5H4 540 aaKnown RBP5.95□□□□□ -1.46
HMGB1P3-201ENST00000502802 GLOD4Q9HC38 313 aa5.95□□□□□ -1.46
HMGB1P3-201ENST00000502802 RXFP3Q9NSD7 469 aa5.95□□□□□ -1.46
HMGB1P3-201ENST00000502802 BICRAQ9NZM4 1560 aa5.95□□□□□ -1.46
HMGB1P3-201ENST00000502802 AASSQ9UDR5 926 aa5.95□□□□□ -1.46
HMGB1P3-201ENST00000502802 NRBP1Q9UHY1 535 aa5.95□□□□□ -1.46
HMGB1P3-201ENST00000502802 LAS1LQ9Y4W2 734 aaKnown RBP5.95□□□□□ -1.46
HMGB1P3-201ENST00000502802 PCDHB7Q9Y5E2 793 aa5.95□□□□□ -1.46
HMGB1P3-201ENST00000502802 RPS6KL1Q9Y6S9 549 aa5.95□□□□□ -1.46
HMGB1P3-201ENST00000502802 A0A087X0M5 115 aa5.94□□□□□ -1.46
HMGB1P3-201ENST00000502802 A0A1B0GX30 115 aa5.94□□□□□ -1.46
HMGB1P3-201ENST00000502802 A1L4Q6 167 aa5.94□□□□□ -1.46
HMGB1P3-201ENST00000502802 PSMD9O00233 223 aa5.94□□□□□ -1.46
HMGB1P3-201ENST00000502802 KIAA0355O15063 1070 aa5.94□□□□□ -1.46
HMGB1P3-201ENST00000502802 VNN1O95497 513 aa5.94□□□□□ -1.46
HMGB1P3-201ENST00000502802 ERBB2P04626 1255 aa5.94□□□□□ -1.46
HMGB1P3-201ENST00000502802 PDHA1P08559 390 aa5.94□□□□□ -1.46
HMGB1P3-201ENST00000502802 DGKQP52824 942 aa5.94□□□□□ -1.46
HMGB1P3-201ENST00000502802 FAM189BP81408 668 aa5.94□□□□□ -1.46
HMGB1P3-201ENST00000502802 SEMA3BQ13214 749 aa5.94□□□□□ -1.46
HMGB1P3-201ENST00000502802 DCTN1Q14203 1278 aa5.94□□□□□ -1.46
HMGB1P3-201ENST00000502802 KCNJ12Q14500 433 aa5.94□□□□□ -1.46
HMGB1P3-201ENST00000502802 NFIXQ14938 502 aa5.94□□□□□ -1.46
HMGB1P3-201ENST00000502802 ST3GAL2Q16842 350 aa5.94□□□□□ -1.46
HMGB1P3-201ENST00000502802 HS1BP3Q53T59 392 aa5.94□□□□□ -1.46
HMGB1P3-201ENST00000502802 RABL3Q5HYI8 236 aa5.94□□□□□ -1.46
HMGB1P3-201ENST00000502802 ZNF484Q5JVG2 852 aa5.94□□□□□ -1.46
HMGB1P3-201ENST00000502802 UBXN11Q5T124 520 aa5.94□□□□□ -1.46
HMGB1P3-201ENST00000502802 FAM90A2PQ658T7 463 aa5.94□□□□□ -1.46
HMGB1P3-201ENST00000502802 ANO7Q6IWH7 933 aa5.94□□□□□ -1.46
HMGB1P3-201ENST00000502802 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P3-201ENST00000502802 CAND1Q86VP6 1230 aaKnown RBP5.94□□□□□ -1.46
HMGB1P3-201ENST00000502802 B3GALNT2Q8NCR0 500 aa5.94□□□□□ -1.46
HMGB1P3-201ENST00000502802 EDAQ92838 391 aa5.94□□□□□ -1.46
HMGB1P3-201ENST00000502802 GLG1Q92896 1179 aa5.94□□□□□ -1.46
HMGB1P3-201ENST00000502802 C7orf26Q96N11 449 aa5.94□□□□□ -1.46
HMGB1P3-201ENST00000502802 PLEKHA5Q9HAU0 1116 aa5.94□□□□□ -1.46
HMGB1P3-201ENST00000502802 AKIP1Q9NQ31 210 aa5.94□□□□□ -1.46
HMGB1P3-201ENST00000502802 FBXO28Q9NVF7 368 aa5.94□□□□□ -1.46
HMGB1P3-201ENST00000502802 RABGAP1Q9Y3P9 1069 aa5.94□□□□□ -1.46
HMGB1P3-201ENST00000502802 A8MVJ9 347 aa5.93□□□□□ -1.46
HMGB1P3-201ENST00000502802 SLC16A3O15427 465 aaKnown RBP5.93□□□□□ -1.46
HMGB1P3-201ENST00000502802 KLK10O43240 276 aa5.93□□□□□ -1.46
HMGB1P3-201ENST00000502802 TIMM44O43615 452 aa5.93□□□□□ -1.46
HMGB1P3-201ENST00000502802 CDKL5O76039 1030 aa5.93□□□□□ -1.46
HMGB1P3-201ENST00000502802 RTN3O95197 1032 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P3-201ENST00000502802 CPA1P15085 419 aa5.93□□□□□ -1.46
HMGB1P3-201ENST00000502802 BMP7P18075 431 aa5.93□□□□□ -1.46
HMGB1P3-201ENST00000502802 THBS4P35443 961 aa5.93□□□□□ -1.46
HMGB1P3-201ENST00000502802 HNRNPMP52272 730 aaKnown RBP eCLIP5.93□□□□□ -1.46
HMGB1P3-201ENST00000502802 BFSP2Q13515 415 aa5.93□□□□□ -1.46
HMGB1P3-201ENST00000502802 AAK1Q2M2I8 961 aa5.93□□□□□ -1.46
HMGB1P3-201ENST00000502802 BEAN1Q3B7T3 259 aa5.93□□□□□ -1.46
HMGB1P3-201ENST00000502802 NRN1LQ496H8 165 aa5.93□□□□□ -1.46
HMGB1P3-201ENST00000502802 AASDHQ4L235 1098 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P3-201ENST00000502802 WDR45BQ5MNZ6 344 aa5.93□□□□□ -1.46
HMGB1P3-201ENST00000502802 LRRC56Q8IYG6 542 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P3-201ENST00000502802 FSIP1Q8NA03 581 aa5.93□□□□□ -1.46
HMGB1P3-201ENST00000502802 SOCS4Q8WXH5 440 aa5.93□□□□□ -1.46
HMGB1P3-201ENST00000502802 CHCHD6Q9BRQ6 235 aa5.93□□□□□ -1.46
HMGB1P3-201ENST00000502802 ACAD9Q9H845 621 aa5.93□□□□□ -1.46
HMGB1P3-201ENST00000502802 PLEKHA2Q9HB19 425 aa5.93□□□□□ -1.46
HMGB1P3-201ENST00000502802 JAG2Q9Y219 1238 aa5.93□□□□□ -1.46
HMGB1P3-201ENST00000502802 UBE2J1Q9Y385 318 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P3-201ENST00000502802 A0A1W2PPH5 198 aa5.92□□□□□ -1.46
HMGB1P3-201ENST00000502802 ANKRD18BA2A2Z9 1011 aa5.92□□□□□ -1.46
HMGB1P3-201ENST00000502802 K7ENM7 598 aa5.92□□□□□ -1.46
HMGB1P3-201ENST00000502802 M0QYT0 321 aa5.92□□□□□ -1.46
HMGB1P3-201ENST00000502802 CFPP27918 469 aa5.92□□□□□ -1.46
HMGB1P3-201ENST00000502802 PSMC2P35998 433 aaKnown RBP5.92□□□□□ -1.46
HMGB1P3-201ENST00000502802 PGM1P36871 562 aa5.92□□□□□ -1.46
HMGB1P3-201ENST00000502802 LIPAP38571 399 aa5.92□□□□□ -1.46
HMGB1P3-201ENST00000502802 DCAF7P61962 342 aa5.92□□□□□ -1.46
HMGB1P3-201ENST00000502802 RBM6P78332 1123 aaKnown RBP5.92□□□□□ -1.46
HMGB1P3-201ENST00000502802 RNASELQ05823 741 aaKnown RBP5.92□□□□□ -1.46
HMGB1P3-201ENST00000502802 ITIH3Q06033 890 aa5.92□□□□□ -1.46
HMGB1P3-201ENST00000502802 PRKG2Q13237 762 aa5.92□□□□□ -1.46
HMGB1P3-201ENST00000502802 BAK1Q16611 211 aa5.92□□□□□ -1.46
HMGB1P3-201ENST00000502802 ANKRD40Q6AI12 368 aa5.92□□□□□ -1.46
HMGB1P3-201ENST00000502802 GRHL2Q6ISB3 625 aa5.92□□□□□ -1.46
HMGB1P3-201ENST00000502802 SYNE3Q6ZMZ3 975 aa5.92□□□□□ -1.46
HMGB1P3-201ENST00000502802 NEK10Q6ZWH5 1172 aa5.92□□□□□ -1.46
HMGB1P3-201ENST00000502802 LRRC8DQ7L1W4 858 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms