RNA–Protein interactions for RNA: ENST00000496143.5

PPM1F-208, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 4

Gene PPM1F, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-208ENST00000496143 PNKPQ96T60 521 aa22.26■■□□□ 1.15
PPM1F-208ENST00000496143 FBRSL1Q9HCM7 1045 aaKnown RBP22.26■■□□□ 1.15
PPM1F-208ENST00000496143 ST7Q9NRC1 585 aa22.26■■□□□ 1.15
PPM1F-208ENST00000496143 BECN2A8MW95 431 aa22.25■■□□□ 1.15
PPM1F-208ENST00000496143 HOXC11O43248 304 aaPredicted RBP22.25■■□□□ 1.15
PPM1F-208ENST00000496143 RNF40O75150 1001 aa22.25■■□□□ 1.15
PPM1F-208ENST00000496143 STC2O76061 302 aa22.25■■□□□ 1.15
PPM1F-208ENST00000496143 CALCAP01258 141 aa22.25■■□□□ 1.15
PPM1F-208ENST00000496143 GPD2P43304 727 aa22.25■■□□□ 1.15
PPM1F-208ENST00000496143 BPIFB4P59827 614 aa22.25■■□□□ 1.15
PPM1F-208ENST00000496143 SATB1Q01826 763 aa22.25■■□□□ 1.15
PPM1F-208ENST00000496143 ANO4Q32M45 955 aa22.25■■□□□ 1.15
PPM1F-208ENST00000496143 NUDT18Q6ZVK8 323 aa22.25■■□□□ 1.15
PPM1F-208ENST00000496143 BHLHA9Q7RTU4 235 aa22.25■■□□□ 1.15
PPM1F-208ENST00000496143 WBP2Q969T9 261 aa22.25■■□□□ 1.15
PPM1F-208ENST00000496143 ACDQ96AP0 544 aa22.25■■□□□ 1.15
PPM1F-208ENST00000496143 TRIM62Q9BVG3 475 aa22.25■■□□□ 1.15
PPM1F-208ENST00000496143 FANCLQ9NW38 375 aa22.25■■□□□ 1.15
PPM1F-208ENST00000496143 TMEM63CQ9P1W3 806 aa22.25■■□□□ 1.15
PPM1F-208ENST00000496143 R4GN57 208 aa22.25■■□□□ 1.15
PPM1F-208ENST00000496143 CACNA1IQ9P0X4 2223 aa22.25■■□□□ 1.15
PPM1F-208ENST00000496143 SLC12A8A0AV02 714 aa22.24■■□□□ 1.15
PPM1F-208ENST00000496143 YJEFN3A6XGL0 299 aa22.24■■□□□ 1.15
PPM1F-208ENST00000496143 CHURC1-FNTBB4DL54 471 aa22.24■■□□□ 1.15
PPM1F-208ENST00000496143 E7ENQ6 273 aa22.24■■□□□ 1.15
PPM1F-208ENST00000496143 GREM1O60565 184 aa22.24■■□□□ 1.15
PPM1F-208ENST00000496143 GFRA3O60609 400 aa22.24■■□□□ 1.15
PPM1F-208ENST00000496143 APODP05090 189 aa22.24■■□□□ 1.15
PPM1F-208ENST00000496143 PTMSP20962 102 aa22.24■■□□□ 1.15
PPM1F-208ENST00000496143 TYRO3Q06418 890 aa22.24■■□□□ 1.15
PPM1F-208ENST00000496143 RAPGEF1Q13905 1077 aa22.24■■□□□ 1.15
PPM1F-208ENST00000496143 KRT31Q15323 416 aa22.24■■□□□ 1.15
PPM1F-208ENST00000496143 GAB4Q2WGN9 574 aa22.24■■□□□ 1.15
PPM1F-208ENST00000496143 NAIF1Q69YI7 327 aaPredicted RBP22.24■■□□□ 1.15
PPM1F-208ENST00000496143 DENND1BQ6P3S1 775 aa22.24■■□□□ 1.15
PPM1F-208ENST00000496143 TSSK4Q6SA08 328 aa22.24■■□□□ 1.15
PPM1F-208ENST00000496143 Q6ZNB5 142 aa22.24■■□□□ 1.15
PPM1F-208ENST00000496143 NDRG1Q92597 394 aaKnown RBP22.24■■□□□ 1.15
PPM1F-208ENST00000496143 PLD4Q96BZ4 506 aa22.24■■□□□ 1.15
PPM1F-208ENST00000496143 LSM14BQ9BX40 385 aaKnown RBP22.24■■□□□ 1.15
PPM1F-208ENST00000496143 VPS16Q9H269 839 aa22.24■■□□□ 1.15
PPM1F-208ENST00000496143 WDR35Q9P2L0 1181 aa22.24■■□□□ 1.15
PPM1F-208ENST00000496143 HBS1LQ9Y450 684 aaKnown RBP22.24■■□□□ 1.15
PPM1F-208ENST00000496143 LTFP02788 710 aa22.23■■□□□ 1.15
PPM1F-208ENST00000496143 HMBSP08397 361 aa22.23■■□□□ 1.15
PPM1F-208ENST00000496143 CDK11BP21127 795 aaKnown RBP22.23■■□□□ 1.15
PPM1F-208ENST00000496143 CHKAP35790 457 aa22.23■■□□□ 1.15
PPM1F-208ENST00000496143 RPL34P49207 117 aaKnown RBP22.23■■□□□ 1.15
PPM1F-208ENST00000496143 KLHDC7AQ5VTJ3 777 aa22.23■■□□□ 1.15
PPM1F-208ENST00000496143 CAVIN1Q6NZI2 390 aaKnown RBP22.23■■□□□ 1.15
PPM1F-208ENST00000496143 TMEM25Q86YD3 366 aa22.23■■□□□ 1.15
PPM1F-208ENST00000496143 ZBTB44Q8NCP5 570 aa22.23■■□□□ 1.15
PPM1F-208ENST00000496143 EDEM1Q92611 657 aa22.23■■□□□ 1.15
PPM1F-208ENST00000496143 NELL1Q92832 810 aa22.23■■□□□ 1.15
PPM1F-208ENST00000496143 NOX5Q96PH1 765 aa22.23■■□□□ 1.15
PPM1F-208ENST00000496143 XPO6Q96QU8 1125 aaKnown RBP22.23■■□□□ 1.15
PPM1F-208ENST00000496143 MIS12Q9H081 205 aa22.23■■□□□ 1.15
PPM1F-208ENST00000496143 ARHGEF4Q9NR80 690 aa22.23■■□□□ 1.15
PPM1F-208ENST00000496143 DEC1Q9P2X7 70 aa22.23■■□□□ 1.15
PPM1F-208ENST00000496143 SLC8A2Q9UPR5 921 aa22.23■■□□□ 1.15
PPM1F-208ENST00000496143 CEP83Q9Y592 693 aa22.23■■□□□ 1.15
PPM1F-208ENST00000496143 FOXN3O00409 490 aaPredicted RBP22.22■■□□□ 1.15
PPM1F-208ENST00000496143 PIK3R2O00459 728 aa22.22■■□□□ 1.15
PPM1F-208ENST00000496143 KAT7O95251 611 aa22.22■■□□□ 1.15
PPM1F-208ENST00000496143 CORO1AP31146 461 aaKnown RBP22.22■■□□□ 1.15
PPM1F-208ENST00000496143 KRT9P35527 623 aa22.22■■□□□ 1.15
PPM1F-208ENST00000496143 GRIA2P42262 883 aa22.22■■□□□ 1.15
PPM1F-208ENST00000496143 HARS2P49590 506 aaKnown RBP22.22■■□□□ 1.15
PPM1F-208ENST00000496143 SNX16P57768 344 aa22.22■■□□□ 1.15
PPM1F-208ENST00000496143 KCNMA1Q12791 1236 aa22.22■■□□□ 1.15
PPM1F-208ENST00000496143 FMNL3Q8IVF7 1028 aa22.22■■□□□ 1.15
PPM1F-208ENST00000496143 FAM71AQ8IYT1 594 aa22.22■■□□□ 1.15
PPM1F-208ENST00000496143 BBS2Q9BXC9 721 aa22.22■■□□□ 1.15
PPM1F-208ENST00000496143 PLCB1Q9NQ66 1216 aa22.22■■□□□ 1.15
PPM1F-208ENST00000496143 MARK1Q9P0L2 795 aa22.22■■□□□ 1.15
PPM1F-208ENST00000496143 PCDHGC3Q9UN70 934 aa22.22■■□□□ 1.15
PPM1F-208ENST00000496143 DAAM1Q9Y4D1 1078 aa22.22■■□□□ 1.15
PPM1F-208ENST00000496143 PRR23AA6NEV1 266 aa22.21■■□□□ 1.15
PPM1F-208ENST00000496143 NEDD8-MDP1E9PL57 170 aa22.21■■□□□ 1.15
PPM1F-208ENST00000496143 LMNAP02545 664 aaKnown RBP22.21■■□□□ 1.15
PPM1F-208ENST00000496143 TDGF1P13385 188 aa22.21■■□□□ 1.15
PPM1F-208ENST00000496143 UCHL3P15374 230 aa22.21■■□□□ 1.15
PPM1F-208ENST00000496143 HOXA6P31267 233 aa22.21■■□□□ 1.15
PPM1F-208ENST00000496143 DRAP1Q14919 205 aaPredicted RBP22.21■■□□□ 1.15
PPM1F-208ENST00000496143 MSANTD2Q6P1R3 559 aa22.21■■□□□ 1.15
PPM1F-208ENST00000496143 TPGS1Q6ZTW0 290 aa22.21■■□□□ 1.15
PPM1F-208ENST00000496143 ETFBKMTQ8IXQ9 262 aa22.21■■□□□ 1.15
PPM1F-208ENST00000496143 RPLP0P6Q8NHW5 317 aa22.21■■□□□ 1.15
PPM1F-208ENST00000496143 SLC4A5Q9BY07 1137 aa22.21■■□□□ 1.15
PPM1F-208ENST00000496143 ACP6Q9NPH0 428 aa22.21■■□□□ 1.15
PPM1F-208ENST00000496143 AJAP1Q9UKB5 411 aaPredicted RBP22.21■■□□□ 1.15
PPM1F-208ENST00000496143 FHOD1Q9Y613 1164 aa22.21■■□□□ 1.15
PPM1F-208ENST00000496143 TULP3O75386 442 aa22.2■■□□□ 1.14
PPM1F-208ENST00000496143 GABBR2O75899 941 aa22.2■■□□□ 1.14
PPM1F-208ENST00000496143 CYBBP04839 570 aa22.2■■□□□ 1.14
PPM1F-208ENST00000496143 SLC6A11P48066 632 aa22.2■■□□□ 1.14
PPM1F-208ENST00000496143 KDSRQ06136 332 aa22.2■■□□□ 1.14
PPM1F-208ENST00000496143 PDCLQ13371 301 aa22.2■■□□□ 1.14
PPM1F-208ENST00000496143 TRIP4Q15650 581 aaPredicted RBP22.2■■□□□ 1.14
PPM1F-208ENST00000496143 TMEM110Q86TL2 294 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms