RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 SATB2Q9UPW6 733 aa15.49■□□□□ 0.07
CHMP2B-205ENST00000494980 SH3BP1Q9Y3L3 701 aa15.49■□□□□ 0.07
CHMP2B-205ENST00000494980 SLC16A4O15374 487 aa15.48■□□□□ 0.07
CHMP2B-205ENST00000494980 TYRP14679 529 aa15.48■□□□□ 0.07
CHMP2B-205ENST00000494980 BCAT1P54687 386 aa15.48■□□□□ 0.07
CHMP2B-205ENST00000494980 RACK1P63244 317 aaKnown RBP15.48■□□□□ 0.07
CHMP2B-205ENST00000494980 BNIP3Q12983 259 aa15.48■□□□□ 0.07
CHMP2B-205ENST00000494980 STRN3Q13033 797 aa15.48■□□□□ 0.07
CHMP2B-205ENST00000494980 PROX2Q3B8N5 592 aa15.48■□□□□ 0.07
CHMP2B-205ENST00000494980 IGF2-ASQ6U949 168 aa15.48■□□□□ 0.07
CHMP2B-205ENST00000494980 FAM177A1Q8N128 213 aaPredicted RBP15.48■□□□□ 0.07
CHMP2B-205ENST00000494980 XPO6Q96QU8 1125 aaKnown RBP15.48■□□□□ 0.07
CHMP2B-205ENST00000494980 BBS2Q9BXC9 721 aa15.48■□□□□ 0.07
CHMP2B-205ENST00000494980 CCSER1Q9C0I3 900 aa15.48■□□□□ 0.07
CHMP2B-205ENST00000494980 LRWD1Q9UFC0 647 aa15.48■□□□□ 0.07
CHMP2B-205ENST00000494980 RBM19Q9Y4C8 960 aaKnown RBP15.48■□□□□ 0.07
CHMP2B-205ENST00000494980 ARRB1P49407 418 aaPredicted RBP15.47■□□□□ 0.07
CHMP2B-205ENST00000494980 ASIC1P78348 528 aa15.47■□□□□ 0.07
CHMP2B-205ENST00000494980 TMEM132DQ14C87 1099 aa15.47■□□□□ 0.07
CHMP2B-205ENST00000494980 KRTAP21-3Q3LHN1 58 aa15.47■□□□□ 0.07
CHMP2B-205ENST00000494980 DENND5BQ6ZUT9 1274 aa15.47■□□□□ 0.07
CHMP2B-205ENST00000494980 DAW1Q8N136 415 aa15.47■□□□□ 0.07
CHMP2B-205ENST00000494980 ZNF564Q8TBZ8 553 aaPredicted RBP15.47■□□□□ 0.07
CHMP2B-205ENST00000494980 TSPAN18Q96SJ8 248 aa15.47■□□□□ 0.07
CHMP2B-205ENST00000494980 ACBD6Q9BR61 282 aa15.47■□□□□ 0.07
CHMP2B-205ENST00000494980 BHMT2Q9H2M3 363 aa15.47■□□□□ 0.07
CHMP2B-205ENST00000494980 DDX43Q9NXZ2 648 aaKnown RBP15.47■□□□□ 0.07
CHMP2B-205ENST00000494980 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.47■□□□□ 0.07
CHMP2B-205ENST00000494980 ATXN7L1Q9ULK2 861 aaPredicted RBP15.47■□□□□ 0.07
CHMP2B-205ENST00000494980 PTPRJQ12913 1337 aa15.46■□□□□ 0.07
CHMP2B-205ENST00000494980 COL27A1Q8IZC6 1860 aaPredicted RBP15.46■□□□□ 0.07
CHMP2B-205ENST00000494980 A0A1W2PNU3 283 aaPredicted RBP15.46■□□□□ 0.07
CHMP2B-205ENST00000494980 OPA1O60313 960 aa15.46■□□□□ 0.07
CHMP2B-205ENST00000494980 NEMFO60524 1076 aa15.46■□□□□ 0.07
CHMP2B-205ENST00000494980 WNT1P04628 370 aa15.46■□□□□ 0.07
CHMP2B-205ENST00000494980 DGKGP49619 791 aa15.46■□□□□ 0.07
CHMP2B-205ENST00000494980 ZNF132P52740 706 aa15.46■□□□□ 0.07
CHMP2B-205ENST00000494980 NCAPHQ15003 741 aa15.46■□□□□ 0.07
CHMP2B-205ENST00000494980 ZNF787Q6DD87 383 aa15.46■□□□□ 0.07
CHMP2B-205ENST00000494980 ZPBP2Q6X784 338 aa15.46■□□□□ 0.07
CHMP2B-205ENST00000494980 PDCL2Q8N4E4 241 aa15.46■□□□□ 0.07
CHMP2B-205ENST00000494980 WBP2Q969T9 261 aa15.46■□□□□ 0.07
CHMP2B-205ENST00000494980 FUBP3Q96I24 572 aaKnown RBP eCLIP15.46■□□□□ 0.07
CHMP2B-205ENST00000494980 SPATA17Q96L03 361 aa15.46■□□□□ 0.07
CHMP2B-205ENST00000494980 SLC46A1Q96NT5 459 aa15.46■□□□□ 0.07
CHMP2B-205ENST00000494980 ESYT1Q9BSJ8 1104 aa15.46■□□□□ 0.07
CHMP2B-205ENST00000494980 TTLL2Q9BWV7 592 aa15.46■□□□□ 0.07
CHMP2B-205ENST00000494980 LHX5Q9H2C1 402 aa15.46■□□□□ 0.07
CHMP2B-205ENST00000494980 GDF3Q9NR23 364 aa15.46■□□□□ 0.07
CHMP2B-205ENST00000494980 APCP25054 2843 aa15.46■□□□□ 0.07
CHMP2B-205ENST00000494980 AKAP9Q99996 3911 aa15.46■□□□□ 0.06
CHMP2B-205ENST00000494980 KPNA7A9QM74 516 aa15.45■□□□□ 0.06
CHMP2B-205ENST00000494980 HCRTO43612 131 aa15.45■□□□□ 0.06
CHMP2B-205ENST00000494980 FAM189A1O60320 539 aa15.45■□□□□ 0.06
CHMP2B-205ENST00000494980 HIP1RO75146 1068 aa15.45■□□□□ 0.06
CHMP2B-205ENST00000494980 GJB6O95452 261 aa15.45■□□□□ 0.06
CHMP2B-205ENST00000494980 ADRB2P07550 413 aa15.45■□□□□ 0.06
CHMP2B-205ENST00000494980 HMGB1P09429 215 aaKnown RBP15.45■□□□□ 0.06
CHMP2B-205ENST00000494980 IRF1P10914 325 aa15.45■□□□□ 0.06
CHMP2B-205ENST00000494980 MAGEA11P43364 429 aa15.45■□□□□ 0.06
CHMP2B-205ENST00000494980 PPP3CCP48454 512 aa15.45■□□□□ 0.06
CHMP2B-205ENST00000494980 DAB2P98082 770 aa15.45■□□□□ 0.06
CHMP2B-205ENST00000494980 ENPP2Q13822 863 aa15.45■□□□□ 0.06
CHMP2B-205ENST00000494980 SV2CQ496J9 727 aa15.45■□□□□ 0.06
CHMP2B-205ENST00000494980 KANSL1Q7Z3B3 1105 aa15.45■□□□□ 0.06
CHMP2B-205ENST00000494980 NSUN7Q8NE18 718 aaKnown RBP15.45■□□□□ 0.06
CHMP2B-205ENST00000494980 SKA1Q96BD8 255 aa15.45■□□□□ 0.06
CHMP2B-205ENST00000494980 THAP10Q9P2Z0 257 aaPredicted RBP15.45■□□□□ 0.06
CHMP2B-205ENST00000494980 PRRC2CQ9Y520 2896 aaKnown RBP15.45■□□□□ 0.06
CHMP2B-205ENST00000494980 SIGLEC6O43699 453 aa15.44■□□□□ 0.06
CHMP2B-205ENST00000494980 IGHV4-34P06331 123 aa15.44■□□□□ 0.06
CHMP2B-205ENST00000494980 CISD3P0C7P0 127 aa15.44■□□□□ 0.06
CHMP2B-205ENST00000494980 PRKCHP24723 683 aa15.44■□□□□ 0.06
CHMP2B-205ENST00000494980 RPA1P27694 616 aa15.44■□□□□ 0.06
CHMP2B-205ENST00000494980 CASRP41180 1078 aa15.44■□□□□ 0.06
CHMP2B-205ENST00000494980 CDH8P55286 799 aa15.44■□□□□ 0.06
CHMP2B-205ENST00000494980 TAF10Q12962 218 aa15.44■□□□□ 0.06
CHMP2B-205ENST00000494980 TBR1Q16650 682 aa15.44■□□□□ 0.06
CHMP2B-205ENST00000494980 TPGS1Q6ZTW0 290 aa15.44■□□□□ 0.06
CHMP2B-205ENST00000494980 TICAM1Q8IUC6 712 aa15.44■□□□□ 0.06
CHMP2B-205ENST00000494980 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.44■□□□□ 0.06
CHMP2B-205ENST00000494980 BHMTQ93088 406 aa15.44■□□□□ 0.06
CHMP2B-205ENST00000494980 BTBD1Q9H0C5 482 aa15.44■□□□□ 0.06
CHMP2B-205ENST00000494980 GZF1Q9H116 711 aaPredicted RBP15.44■□□□□ 0.06
CHMP2B-205ENST00000494980 TMPRSS4Q9NRS4 437 aa15.44■□□□□ 0.06
CHMP2B-205ENST00000494980 GJB4Q9NTQ9 266 aa15.44■□□□□ 0.06
CHMP2B-205ENST00000494980 GEMIN8Q9NWZ8 242 aaKnown RBP15.44■□□□□ 0.06
CHMP2B-205ENST00000494980 L1RE1Q9UN81 338 aa15.44■□□□□ 0.06
CHMP2B-205ENST00000494980 PLAAQ9Y263 795 aa15.44■□□□□ 0.06
CHMP2B-205ENST00000494980 TDRD6O60522 2096 aaKnown RBP15.44■□□□□ 0.06
CHMP2B-205ENST00000494980 SPG11Q96JI7 2443 aa15.43■□□□□ 0.06
CHMP2B-205ENST00000494980 PMS2P1A4D2B8 440 aa15.43■□□□□ 0.06
CHMP2B-205ENST00000494980 CDRT15L2A8MXV6 281 aa15.43■□□□□ 0.06
CHMP2B-205ENST00000494980 WNT7AO00755 349 aa15.43■□□□□ 0.06
CHMP2B-205ENST00000494980 CYP26A1O43174 497 aa15.43■□□□□ 0.06
CHMP2B-205ENST00000494980 COCHO43405 550 aa15.43■□□□□ 0.06
CHMP2B-205ENST00000494980 ANXA13P27216 316 aa15.43■□□□□ 0.06
CHMP2B-205ENST00000494980 PDIA3P30101 505 aaKnown RBP15.43■□□□□ 0.06
CHMP2B-205ENST00000494980 SRSF6Q13247 344 aaKnown RBP15.43■□□□□ 0.06
CHMP2B-205ENST00000494980 KRT32Q14532 448 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms