RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 STC2O76061 302 aa15.41■□□□□ 0.06
ATG4B-224ENST00000494132 TDGF1P13385 188 aa15.41■□□□□ 0.06
ATG4B-224ENST00000494132 PXNP49023 591 aaPredicted RBP15.41■□□□□ 0.06
ATG4B-224ENST00000494132 FNTBP49356 437 aa15.41■□□□□ 0.06
ATG4B-224ENST00000494132 DAOAP59103 153 aa15.41■□□□□ 0.06
ATG4B-224ENST00000494132 GOLGA8FQ08AF8 430 aa15.41■□□□□ 0.06
ATG4B-224ENST00000494132 GOLGA8DPQ0D2H9 430 aa15.41■□□□□ 0.06
ATG4B-224ENST00000494132 KCNMA1Q12791 1236 aa15.41■□□□□ 0.06
ATG4B-224ENST00000494132 ZNF528Q3MIS6 628 aa15.41■□□□□ 0.06
ATG4B-224ENST00000494132 TCP11X2Q5H9J9 407 aa15.41■□□□□ 0.06
ATG4B-224ENST00000494132 KLHDC10Q6PID8 442 aa15.41■□□□□ 0.06
ATG4B-224ENST00000494132 HTR3DQ70Z44 454 aa15.41■□□□□ 0.06
ATG4B-224ENST00000494132 ARHGAP18Q8N392 663 aa15.41■□□□□ 0.06
ATG4B-224ENST00000494132 ZNF606Q8WXB4 792 aa15.41■□□□□ 0.06
ATG4B-224ENST00000494132 KCTD13Q8WZ19 329 aa15.41■□□□□ 0.06
ATG4B-224ENST00000494132 IER2Q9BTL4 223 aa15.41■□□□□ 0.06
ATG4B-224ENST00000494132 VPS16Q9H269 839 aa15.41■□□□□ 0.06
ATG4B-224ENST00000494132 SPHK2Q9NRA0 654 aa15.41■□□□□ 0.06
ATG4B-224ENST00000494132 ANO10Q9NW15 660 aa15.41■□□□□ 0.06
ATG4B-224ENST00000494132 MARCH2Q9P0N8 246 aa15.41■□□□□ 0.06
ATG4B-224ENST00000494132 PTPRZ1P23471 2315 aaPredicted RBP15.41■□□□□ 0.06
ATG4B-224ENST00000494132 NEDD8-MDP1E9PL57 170 aa15.4■□□□□ 0.06
ATG4B-224ENST00000494132 K7ESF4 209 aa15.4■□□□□ 0.06
ATG4B-224ENST00000494132 MSI1O43347 362 aaKnown RBP15.4■□□□□ 0.06
ATG4B-224ENST00000494132 KLKB1P03952 638 aa15.4■□□□□ 0.06
ATG4B-224ENST00000494132 GAD2Q05329 585 aa15.4■□□□□ 0.06
ATG4B-224ENST00000494132 SRSF5Q13243 272 aaKnown RBP15.4■□□□□ 0.06
ATG4B-224ENST00000494132 STILQ15468 1287 aa15.4■□□□□ 0.06
ATG4B-224ENST00000494132 STX1AQ16623 288 aa15.4■□□□□ 0.06
ATG4B-224ENST00000494132 C2orf27AQ580R0 203 aa15.4■□□□□ 0.06
ATG4B-224ENST00000494132 BSPRYQ5W0U4 402 aa15.4■□□□□ 0.06
ATG4B-224ENST00000494132 DPY19L2P1Q6NXN4 242 aa15.4■□□□□ 0.06
ATG4B-224ENST00000494132 ZC3H14Q6PJT7 736 aaKnown RBP15.4■□□□□ 0.06
ATG4B-224ENST00000494132 ENOSF1Q7L5Y1 443 aa15.4■□□□□ 0.06
ATG4B-224ENST00000494132 TADA2BQ86TJ2 420 aa15.4■□□□□ 0.06
ATG4B-224ENST00000494132 PASD1Q8IV76 773 aa15.4■□□□□ 0.06
ATG4B-224ENST00000494132 SYNPOQ8N3V7 929 aa15.4■□□□□ 0.06
ATG4B-224ENST00000494132 ENOX1Q8TC92 643 aaKnown RBP15.4■□□□□ 0.06
ATG4B-224ENST00000494132 ATRIPQ8WXE1 791 aa15.4■□□□□ 0.06
ATG4B-224ENST00000494132 SHC3Q92529 594 aa15.4■□□□□ 0.06
ATG4B-224ENST00000494132 LSM14BQ9BX40 385 aaKnown RBP15.4■□□□□ 0.06
ATG4B-224ENST00000494132 FANCLQ9NW38 375 aa15.4■□□□□ 0.06
ATG4B-224ENST00000494132 ZSCAN32Q9NX65 697 aa15.4■□□□□ 0.06
ATG4B-224ENST00000494132 PLK2Q9NYY3 685 aa15.4■□□□□ 0.06
ATG4B-224ENST00000494132 CYTH4Q9UIA0 394 aa15.4■□□□□ 0.06
ATG4B-224ENST00000494132 K7EQS6 105 aa15.39■□□□□ 0.05
ATG4B-224ENST00000494132 FOXN3O00409 490 aaPredicted RBP15.39■□□□□ 0.05
ATG4B-224ENST00000494132 EEF1GP26641 437 aaKnown RBP15.39■□□□□ 0.05
ATG4B-224ENST00000494132 CORO1AP31146 461 aaKnown RBP15.39■□□□□ 0.05
ATG4B-224ENST00000494132 GPD2P43304 727 aa15.39■□□□□ 0.05
ATG4B-224ENST00000494132 KLK7P49862 253 aa15.39■□□□□ 0.05
ATG4B-224ENST00000494132 RAPGEF1Q13905 1077 aa15.39■□□□□ 0.05
ATG4B-224ENST00000494132 KRT31Q15323 416 aa15.39■□□□□ 0.05
ATG4B-224ENST00000494132 LPAL2Q16609 132 aa15.39■□□□□ 0.05
ATG4B-224ENST00000494132 CT47A1Q5JQC4 288 aaPredicted RBP15.39■□□□□ 0.05
ATG4B-224ENST00000494132 CDKAL1Q5VV42 579 aa15.39■□□□□ 0.05
ATG4B-224ENST00000494132 CAVIN1Q6NZI2 390 aaKnown RBP15.39■□□□□ 0.05
ATG4B-224ENST00000494132 MAMSTRQ6ZN01 415 aa15.39■□□□□ 0.05
ATG4B-224ENST00000494132 Q6ZNB5 142 aa15.39■□□□□ 0.05
ATG4B-224ENST00000494132 DENND1CQ8IV53 801 aa15.39■□□□□ 0.05
ATG4B-224ENST00000494132 FMNL3Q8IVF7 1028 aa15.39■□□□□ 0.05
ATG4B-224ENST00000494132 KIAA1958Q8N8K9 716 aa15.39■□□□□ 0.05
ATG4B-224ENST00000494132 ZBTB44Q8NCP5 570 aa15.39■□□□□ 0.05
ATG4B-224ENST00000494132 NELL1Q92832 810 aa15.39■□□□□ 0.05
ATG4B-224ENST00000494132 EXOC4Q96A65 974 aa15.39■□□□□ 0.05
ATG4B-224ENST00000494132 OTUB2Q96DC9 234 aa15.39■□□□□ 0.05
ATG4B-224ENST00000494132 P2RY11Q96G91 374 aa15.39■□□□□ 0.05
ATG4B-224ENST00000494132 HHIPQ96QV1 700 aa15.39■□□□□ 0.05
ATG4B-224ENST00000494132 CDK5RAP1Q96SZ6 601 aaKnown RBP15.39■□□□□ 0.05
ATG4B-224ENST00000494132 PNKPQ96T60 521 aa15.39■□□□□ 0.05
ATG4B-224ENST00000494132 BBS2Q9BXC9 721 aa15.39■□□□□ 0.05
ATG4B-224ENST00000494132 CNGB3Q9NQW8 809 aa15.39■□□□□ 0.05
ATG4B-224ENST00000494132 ARHGEF4Q9NR80 690 aa15.39■□□□□ 0.05
ATG4B-224ENST00000494132 TJP2Q9UDY2 1190 aa15.39■□□□□ 0.05
ATG4B-224ENST00000494132 FHOD1Q9Y613 1164 aa15.39■□□□□ 0.05
ATG4B-224ENST00000494132 GPR179Q6PRD1 2367 aa15.38■□□□□ 0.05
ATG4B-224ENST00000494132 TULP3O75386 442 aa15.38■□□□□ 0.05
ATG4B-224ENST00000494132 KAT7O95251 611 aa15.38■□□□□ 0.05
ATG4B-224ENST00000494132 LMNAP02545 664 aaKnown RBP15.38■□□□□ 0.05
ATG4B-224ENST00000494132 APODP05090 189 aa15.38■□□□□ 0.05
ATG4B-224ENST00000494132 COG7P83436 770 aa15.38■□□□□ 0.05
ATG4B-224ENST00000494132 PPP2R5DQ14738 602 aa15.38■□□□□ 0.05
ATG4B-224ENST00000494132 EMC10Q5UCC4 262 aa15.38■□□□□ 0.05
ATG4B-224ENST00000494132 SLC47A2Q86VL8 602 aa15.38■□□□□ 0.05
ATG4B-224ENST00000494132 SCUBE3Q8IX30 993 aa15.38■□□□□ 0.05
ATG4B-224ENST00000494132 ZNF276Q8N554 614 aa15.38■□□□□ 0.05
ATG4B-224ENST00000494132 CCDC33Q8N5R6 958 aa15.38■□□□□ 0.05
ATG4B-224ENST00000494132 RNF139Q8WU17 664 aa15.38■□□□□ 0.05
ATG4B-224ENST00000494132 PLCB1Q9NQ66 1216 aa15.38■□□□□ 0.05
ATG4B-224ENST00000494132 STRIP2Q9ULQ0 834 aa15.38■□□□□ 0.05
ATG4B-224ENST00000494132 SLC8A2Q9UPR5 921 aa15.38■□□□□ 0.05
ATG4B-224ENST00000494132 PCDHGA2Q9Y5H1 932 aa15.38■□□□□ 0.05
ATG4B-224ENST00000494132 EP300Q09472 2414 aaPredicted RBP15.38■□□□□ 0.05
ATG4B-224ENST00000494132 OTOGLQ3ZCN5 2332 aa15.38■□□□□ 0.05
ATG4B-224ENST00000494132 E5RJQ4 531 aa15.37■□□□□ 0.05
ATG4B-224ENST00000494132 HOXC11O43248 304 aaPredicted RBP15.37■□□□□ 0.05
ATG4B-224ENST00000494132 MED7O43513 233 aa15.37■□□□□ 0.05
ATG4B-224ENST00000494132 LILRB5O75023 590 aa15.37■□□□□ 0.05
ATG4B-224ENST00000494132 LTFP02788 710 aa15.37■□□□□ 0.05
ATG4B-224ENST00000494132 TYRP14679 529 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms