RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 NDRG1Q92597 394 aaKnown RBP23.72■■□□□ 1.39
SNIP1-203ENST00000493916 OLA1Q9NTK5 396 aaKnown RBP23.72■■□□□ 1.39
SNIP1-203ENST00000493916 MARCH2Q9P0N8 246 aa23.72■■□□□ 1.39
SNIP1-203ENST00000493916 STRIP2Q9ULQ0 834 aa23.72■■□□□ 1.39
SNIP1-203ENST00000493916 YJEFN3A6XGL0 299 aa23.71■■□□□ 1.39
SNIP1-203ENST00000493916 E7ENQ6 273 aa23.71■■□□□ 1.39
SNIP1-203ENST00000493916 GFRA3O60609 400 aa23.71■■□□□ 1.39
SNIP1-203ENST00000493916 FBXO21O94952 628 aa23.71■■□□□ 1.39
SNIP1-203ENST00000493916 LETM1O95202 739 aaPredicted RBP23.71■■□□□ 1.39
SNIP1-203ENST00000493916 GPD2P43304 727 aa23.71■■□□□ 1.39
SNIP1-203ENST00000493916 BSPRYQ5W0U4 402 aa23.71■■□□□ 1.39
SNIP1-203ENST00000493916 BTBD8Q5XKL5 378 aa23.71■■□□□ 1.39
SNIP1-203ENST00000493916 PKN3Q6P5Z2 889 aa23.71■■□□□ 1.39
SNIP1-203ENST00000493916 ASCL5Q7RTU5 278 aa23.71■■□□□ 1.39
SNIP1-203ENST00000493916 ZNF606Q8WXB4 792 aa23.71■■□□□ 1.39
SNIP1-203ENST00000493916 C2orf42Q9NWW7 574 aa23.71■■□□□ 1.39
SNIP1-203ENST00000493916 DNAJC12Q9UKB3 198 aa23.71■■□□□ 1.39
SNIP1-203ENST00000493916 AJAP1Q9UKB5 411 aaPredicted RBP23.71■■□□□ 1.39
SNIP1-203ENST00000493916 ZNF510Q9Y2H8 683 aa23.71■■□□□ 1.39
SNIP1-203ENST00000493916 ZFHX2Q9C0A1 2572 aaPredicted RBP23.7■■□□□ 1.38
SNIP1-203ENST00000493916 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.7■■□□□ 1.38
SNIP1-203ENST00000493916 K7ESF4 209 aa23.7■■□□□ 1.38
SNIP1-203ENST00000493916 LILRB5O75023 590 aa23.7■■□□□ 1.38
SNIP1-203ENST00000493916 HOXA6P31267 233 aa23.7■■□□□ 1.38
SNIP1-203ENST00000493916 DENND1BQ6P3S1 775 aa23.7■■□□□ 1.38
SNIP1-203ENST00000493916 C12orf40Q86WS4 652 aa23.7■■□□□ 1.38
SNIP1-203ENST00000493916 ETFBKMTQ8IXQ9 262 aa23.7■■□□□ 1.38
SNIP1-203ENST00000493916 STK32AQ8WU08 396 aa23.7■■□□□ 1.38
SNIP1-203ENST00000493916 ATRIPQ8WXE1 791 aa23.7■■□□□ 1.38
SNIP1-203ENST00000493916 PNKPQ96T60 521 aa23.7■■□□□ 1.38
SNIP1-203ENST00000493916 ACP6Q9NPH0 428 aa23.7■■□□□ 1.38
SNIP1-203ENST00000493916 ABCC13Q9NSE7 274 aa23.7■■□□□ 1.38
SNIP1-203ENST00000493916 MARK1Q9P0L2 795 aa23.7■■□□□ 1.38
SNIP1-203ENST00000493916 TMEM63CQ9P1W3 806 aa23.7■■□□□ 1.38
SNIP1-203ENST00000493916 KIAA1549LQ6ZVL6 1849 aa23.7■■□□□ 1.38
SNIP1-203ENST00000493916 PES1O00541 588 aaKnown RBP23.69■■□□□ 1.38
SNIP1-203ENST00000493916 THAP12O43422 761 aa23.69■■□□□ 1.38
SNIP1-203ENST00000493916 USP8P40818 1118 aa23.69■■□□□ 1.38
SNIP1-203ENST00000493916 MYL5Q02045 173 aa23.69■■□□□ 1.38
SNIP1-203ENST00000493916 KCNMA1Q12791 1236 aa23.69■■□□□ 1.38
SNIP1-203ENST00000493916 TMEM25Q86YD3 366 aa23.69■■□□□ 1.38
SNIP1-203ENST00000493916 PLD4Q96BZ4 506 aa23.69■■□□□ 1.38
SNIP1-203ENST00000493916 DCLK3Q9C098 648 aa23.69■■□□□ 1.38
SNIP1-203ENST00000493916 TAB2Q9NYJ8 693 aa23.69■■□□□ 1.38
SNIP1-203ENST00000493916 A0A0A0MRY4 1105 aa23.68■■□□□ 1.38
SNIP1-203ENST00000493916 K7EQS6 105 aa23.68■■□□□ 1.38
SNIP1-203ENST00000493916 KLKB1P03952 638 aa23.68■■□□□ 1.38
SNIP1-203ENST00000493916 ACADSBP45954 432 aa23.68■■□□□ 1.38
SNIP1-203ENST00000493916 SLC6A11P48066 632 aa23.68■■□□□ 1.38
SNIP1-203ENST00000493916 KRT31Q15323 416 aa23.68■■□□□ 1.38
SNIP1-203ENST00000493916 KLHDC7AQ5VTJ3 777 aa23.68■■□□□ 1.38
SNIP1-203ENST00000493916 PHTF2Q8N3S3 785 aa23.68■■□□□ 1.38
SNIP1-203ENST00000493916 RPLP0P6Q8NHW5 317 aa23.68■■□□□ 1.38
SNIP1-203ENST00000493916 RNF139Q8WU17 664 aa23.68■■□□□ 1.38
SNIP1-203ENST00000493916 FANCLQ9NW38 375 aa23.68■■□□□ 1.38
SNIP1-203ENST00000493916 SLC12A8A0AV02 714 aa23.67■■□□□ 1.38
SNIP1-203ENST00000493916 PIK3R2O00459 728 aa23.67■■□□□ 1.38
SNIP1-203ENST00000493916 SART1O43290 800 aaKnown RBP23.67■■□□□ 1.38
SNIP1-203ENST00000493916 KAT7O95251 611 aa23.67■■□□□ 1.38
SNIP1-203ENST00000493916 LMNAP02545 664 aaKnown RBP23.67■■□□□ 1.38
SNIP1-203ENST00000493916 APODP05090 189 aa23.67■■□□□ 1.38
SNIP1-203ENST00000493916 CORO1AP31146 461 aaKnown RBP23.67■■□□□ 1.38
SNIP1-203ENST00000493916 GRIA2P42262 883 aa23.67■■□□□ 1.38
SNIP1-203ENST00000493916 TRIP4Q15650 581 aaPredicted RBP23.67■■□□□ 1.38
SNIP1-203ENST00000493916 ANO4Q32M45 955 aa23.67■■□□□ 1.38
SNIP1-203ENST00000493916 PREPLQ4J6C6 727 aaPredicted RBP23.67■■□□□ 1.38
SNIP1-203ENST00000493916 MSANTD2Q6P1R3 559 aa23.67■■□□□ 1.38
SNIP1-203ENST00000493916 FMNL3Q8IVF7 1028 aa23.67■■□□□ 1.38
SNIP1-203ENST00000493916 EDEM1Q92611 657 aa23.67■■□□□ 1.38
SNIP1-203ENST00000493916 ACDQ96AP0 544 aa23.67■■□□□ 1.38
SNIP1-203ENST00000493916 SLC4A5Q9BY07 1137 aa23.67■■□□□ 1.38
SNIP1-203ENST00000493916 ARHGEF4Q9NR80 690 aa23.67■■□□□ 1.38
SNIP1-203ENST00000493916 WDR35Q9P2L0 1181 aa23.67■■□□□ 1.38
SNIP1-203ENST00000493916 PCDHGC3Q9UN70 934 aa23.67■■□□□ 1.38
SNIP1-203ENST00000493916 HBS1LQ9Y450 684 aaKnown RBP23.67■■□□□ 1.38
SNIP1-203ENST00000493916 FRYLO94915 3013 aa23.66■■□□□ 1.38
SNIP1-203ENST00000493916 FOXN3O00409 490 aaPredicted RBP23.66■■□□□ 1.38
SNIP1-203ENST00000493916 CACNG3O60359 315 aa23.66■■□□□ 1.38
SNIP1-203ENST00000493916 TULP3O75386 442 aa23.66■■□□□ 1.38
SNIP1-203ENST00000493916 LTFP02788 710 aa23.66■■□□□ 1.38
SNIP1-203ENST00000493916 TPM2P07951 284 aa23.66■■□□□ 1.38
SNIP1-203ENST00000493916 HMBSP08397 361 aa23.66■■□□□ 1.38
SNIP1-203ENST00000493916 PTK2Q05397 1052 aa23.66■■□□□ 1.38
SNIP1-203ENST00000493916 TYRO3Q06418 890 aa23.66■■□□□ 1.38
SNIP1-203ENST00000493916 MESP2Q0VG99 397 aa23.66■■□□□ 1.38
SNIP1-203ENST00000493916 SYT13Q7L8C5 426 aa23.66■■□□□ 1.38
SNIP1-203ENST00000493916 FAM71AQ8IYT1 594 aa23.66■■□□□ 1.38
SNIP1-203ENST00000493916 USP33Q8TEY7 942 aa23.66■■□□□ 1.38
SNIP1-203ENST00000493916 CLEC4CQ8WTT0 213 aa23.66■■□□□ 1.38
SNIP1-203ENST00000493916 GOLGA1Q92805 767 aa23.66■■□□□ 1.38
SNIP1-203ENST00000493916 LSM14BQ9BX40 385 aaKnown RBP23.66■■□□□ 1.38
SNIP1-203ENST00000493916 BBS2Q9BXC9 721 aa23.66■■□□□ 1.38
SNIP1-203ENST00000493916 NAA15Q9BXJ9 866 aaKnown RBP23.66■■□□□ 1.38
SNIP1-203ENST00000493916 EPC1Q9H2F5 836 aa23.66■■□□□ 1.38
SNIP1-203ENST00000493916 PLCB1Q9NQ66 1216 aa23.66■■□□□ 1.38
SNIP1-203ENST00000493916 ST7Q9NRC1 585 aa23.66■■□□□ 1.38
SNIP1-203ENST00000493916 CYTH4Q9UIA0 394 aa23.66■■□□□ 1.38
SNIP1-203ENST00000493916 AGO1Q9UL18 857 aaKnown RBP23.66■■□□□ 1.38
SNIP1-203ENST00000493916 FHOD1Q9Y613 1164 aa23.66■■□□□ 1.38
SNIP1-203ENST00000493916 WDR87Q6ZQQ6 2873 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms