RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 RPS6KL1Q9Y6S9 549 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 SYNJ1O43426 1573 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 AREL1O15033 823 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 RPS6KA5O75582 802 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 SCTRP47872 440 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 NANOGNBQ7Z5D8 188 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 ERO1BQ86YB8 467 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 SLC13A5Q86YT5 568 aaPredicted RBP8.08□□□□□ -1.12
BRCA1-221ENST00000493795 USP38Q8NB14 1042 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 KYQ8NBH2 561 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 FEZF2Q8TBJ5 459 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 FAM192AQ9GZU8 254 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 TBX22Q9Y458 520 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 NEDD4P46934 1319 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 SDR42E2A6NKP2 422 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 STX16-NPEPL1H3BU86 382 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 POLRMTO00411 1230 aaKnown RBP8.08□□□□□ -1.12
BRCA1-221ENST00000493795 STX16O14662 325 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 DGAT1O75907 488 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 CYP2A7P20853 494 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 SLC29A2Q14542 456 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 ABRAXAS1Q6UWZ7 409 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 CBWD2Q8IUF1 395 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 TCAIMQ8N3R3 496 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 OXER1Q8TDS5 423 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 PROX1Q92786 737 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 APBB2Q92870 758 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 DNAJC1Q96KC8 554 aaKnown RBP8.08□□□□□ -1.12
BRCA1-221ENST00000493795 C9orf16Q9BUW7 83 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 C1QTNF1Q9BXJ1 281 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 CYP4F12Q9HCS2 524 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 CHST12Q9NRB3 414 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 DDX18Q9NVP1 670 aaKnown RBP8.08□□□□□ -1.12
BRCA1-221ENST00000493795 NCKIPSDQ9NZQ3 722 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 RBM7Q9Y580 266 aaKnown RBP8.08□□□□□ -1.12
BRCA1-221ENST00000493795 APOC1P02654 83 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 SKIV2L2P42285 1042 aaKnown RBP8.07□□□□□ -1.12
BRCA1-221ENST00000493795 ARF3P61204 181 aaPredicted RBP8.07□□□□□ -1.12
BRCA1-221ENST00000493795 ARF1P84077 181 aaKnown RBP8.07□□□□□ -1.12
BRCA1-221ENST00000493795 BST2Q10589 180 aaKnown RBP8.07□□□□□ -1.12
BRCA1-221ENST00000493795 NR6A1Q15406 480 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 SNRNP35Q16560 246 aaKnown RBP8.07□□□□□ -1.12
BRCA1-221ENST00000493795 SWI5Q1ZZU3 235 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 RGS21Q2M5E4 152 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 SMTNL2Q2TAL5 461 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 AGKQ53H12 422 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 LRRC74BQ6ZQY2 392 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 TSHZ1Q6ZSZ6 1077 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 MSANTD1Q6ZTZ1 278 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 ADGRF4Q8IZF3 695 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 TMEM132CQ8N3T6 1108 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 STARD8Q92502 1023 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 MYLPFQ96A32 169 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 ACOX2Q99424 681 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 PIF1Q9H611 641 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 BSDC1Q9NW68 430 aaPredicted RBP8.07□□□□□ -1.12
BRCA1-221ENST00000493795 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.07□□□□□ -1.12
BRCA1-221ENST00000493795 TOPBP1Q92547 1522 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 HIST1H2ABP04908 130 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 LYNP07948 512 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 TPBGLP0DKB5 382 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 SRGNP10124 158 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 TXNP10599 105 aaKnown RBP8.07□□□□□ -1.12
BRCA1-221ENST00000493795 TKTP29401 623 aaKnown RBP8.07□□□□□ -1.12
BRCA1-221ENST00000493795 OMPP47874 163 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 ACOT2P49753 483 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 OXCT1P55809 520 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 XKR3Q5GH77 459 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 WASHC2DQ5SRD0 308 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 GPAT2Q6NUI2 795 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 GLB1LQ6UWU2 654 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 HIST3H2AQ7L7L0 130 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 RAET1EQ8TD07 263 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 WDR60Q8WVS4 1066 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 HIST1H2ACQ93077 130 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 ACTR8Q9H981 624 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 LRRC40Q9H9A6 602 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 CROTQ9UKG9 612 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 PPIEQ9UNP9 301 aaKnown RBP8.07□□□□□ -1.12
BRCA1-221ENST00000493795 PCDHB2Q9Y5E7 798 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 ZNF335Q9H4Z2 1342 aaPredicted RBP8.07□□□□□ -1.12
BRCA1-221ENST00000493795 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.07□□□□□ -1.12
BRCA1-221ENST00000493795 MPOP05164 745 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 PTPN3P26045 913 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 EPHB2P29323 1055 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 RFC5P40937 340 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 PNPLA4P41247 253 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 GSSP48637 474 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 SNRPFP62306 86 aaKnown RBP8.07□□□□□ -1.12
BRCA1-221ENST00000493795 BNC1Q01954 994 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 ILF2Q12905 390 aaKnown RBP8.07□□□□□ -1.12
BRCA1-221ENST00000493795 ITGADQ13349 1161 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 STARD3Q14849 445 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 PYDC2Q56P42 97 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 RUNDC3AQ59EK9 446 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 PI16Q6UXB8 463 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 RASGRP2Q7LDG7 609 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 SMYD1Q8NB12 490 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.07□□□□□ -1.12
BRCA1-221ENST00000493795 KCND2Q9NZV8 630 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms