RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 SIX6OS1Q8N1H7 587 aa28.44■■■□□ 2.14
SH3GL3-204ENST00000492099 NAT16Q8N8M0 369 aa28.44■■■□□ 2.14
SH3GL3-204ENST00000492099 GAB3Q8WWW8 586 aa28.44■■■□□ 2.14
SH3GL3-204ENST00000492099 MED15Q96RN5 788 aa28.44■■■□□ 2.14
SH3GL3-204ENST00000492099 DCLK3Q9C098 648 aa28.44■■■□□ 2.14
SH3GL3-204ENST00000492099 EBF1Q9UH73 591 aa28.44■■■□□ 2.14
SH3GL3-204ENST00000492099 WDR3Q9UNX4 943 aaKnown RBP eCLIP28.44■■■□□ 2.14
SH3GL3-204ENST00000492099 AXIN1O15169 862 aa28.43■■■□□ 2.14
SH3GL3-204ENST00000492099 TULP3O75386 442 aa28.43■■■□□ 2.14
SH3GL3-204ENST00000492099 RETP07949 1114 aa28.43■■■□□ 2.14
SH3GL3-204ENST00000492099 KDSRQ06136 332 aa28.43■■■□□ 2.14
SH3GL3-204ENST00000492099 ADIGQ0VDE8 80 aa28.43■■■□□ 2.14
SH3GL3-204ENST00000492099 MESP2Q0VG99 397 aa28.43■■■□□ 2.14
SH3GL3-204ENST00000492099 SCML4Q8N228 414 aa28.43■■■□□ 2.14
SH3GL3-204ENST00000492099 PHTF2Q8N3S3 785 aa28.43■■■□□ 2.14
SH3GL3-204ENST00000492099 XPO6Q96QU8 1125 aaKnown RBP28.43■■■□□ 2.14
SH3GL3-204ENST00000492099 BBS2Q9BXC9 721 aa28.43■■■□□ 2.14
SH3GL3-204ENST00000492099 CNGB3Q9NQW8 809 aa28.43■■■□□ 2.14
SH3GL3-204ENST00000492099 OLA1Q9NTK5 396 aaKnown RBP28.43■■■□□ 2.14
SH3GL3-204ENST00000492099 MARK1Q9P0L2 795 aa28.43■■■□□ 2.14
SH3GL3-204ENST00000492099 MARCH2Q9P0N8 246 aa28.43■■■□□ 2.14
SH3GL3-204ENST00000492099 MMP17Q9ULZ9 603 aa28.43■■■□□ 2.14
SH3GL3-204ENST00000492099 FRYLO94915 3013 aa28.43■■■□□ 2.14
SH3GL3-204ENST00000492099 TBC1D3BA6NDS4 549 aa28.42■■■□□ 2.14
SH3GL3-204ENST00000492099 RPP40O75818 363 aaKnown RBP28.42■■■□□ 2.14
SH3GL3-204ENST00000492099 ZNF132P52740 706 aa28.42■■■□□ 2.14
SH3GL3-204ENST00000492099 TPD52L1Q16890 204 aaPredicted RBP28.42■■■□□ 2.14
SH3GL3-204ENST00000492099 TPGS1Q6ZTW0 290 aa28.42■■■□□ 2.14
SH3GL3-204ENST00000492099 BHLHA9Q7RTU4 235 aa28.42■■■□□ 2.14
SH3GL3-204ENST00000492099 ARHGAP30Q7Z6I6 1101 aaPredicted RBP28.42■■■□□ 2.14
SH3GL3-204ENST00000492099 SLC35F5Q8WV83 523 aa28.42■■■□□ 2.14
SH3GL3-204ENST00000492099 FAM81BQ96LP2 452 aa28.42■■■□□ 2.14
SH3GL3-204ENST00000492099 KREMEN1Q96MU8 473 aa28.42■■■□□ 2.14
SH3GL3-204ENST00000492099 NUP62CLQ9H1M0 184 aa28.42■■■□□ 2.14
SH3GL3-204ENST00000492099 UBE2TQ9NPD8 197 aaPredicted RBP28.42■■■□□ 2.14
SH3GL3-204ENST00000492099 CNTN6Q9UQ52 1028 aa28.42■■■□□ 2.14
SH3GL3-204ENST00000492099 MYOFQ9NZM1 2061 aa28.42■■■□□ 2.14
SH3GL3-204ENST00000492099 NEDD8-MDP1E9PL57 170 aa28.41■■■□□ 2.14
SH3GL3-204ENST00000492099 BRD2P25440 801 aaKnown RBP28.41■■■□□ 2.14
SH3GL3-204ENST00000492099 ENOSF1Q7L5Y1 443 aa28.41■■■□□ 2.14
SH3GL3-204ENST00000492099 SFTPA1Q8IWL2 248 aa28.41■■■□□ 2.14
SH3GL3-204ENST00000492099 TSTD1Q8NFU3 115 aa28.41■■■□□ 2.14
SH3GL3-204ENST00000492099 KCNV2Q8TDN2 545 aa28.41■■■□□ 2.14
SH3GL3-204ENST00000492099 ZSWIM1Q9BR11 485 aa28.41■■■□□ 2.14
SH3GL3-204ENST00000492099 DACH1Q9UI36 760 aa28.41■■■□□ 2.14
SH3GL3-204ENST00000492099 M0QYV0 167 aa28.4■■■□□ 2.14
SH3GL3-204ENST00000492099 CACNG3O60359 315 aa28.4■■■□□ 2.14
SH3GL3-204ENST00000492099 TYRP14679 529 aa28.4■■■□□ 2.14
SH3GL3-204ENST00000492099 TIE1P35590 1138 aa28.4■■■□□ 2.14
SH3GL3-204ENST00000492099 CHKAP35790 457 aa28.4■■■□□ 2.14
SH3GL3-204ENST00000492099 KIR2DL1P43626 348 aaPredicted RBP28.4■■■□□ 2.14
SH3GL3-204ENST00000492099 CRY1Q16526 586 aa28.4■■■□□ 2.14
SH3GL3-204ENST00000492099 CACNA2D4Q7Z3S7 1137 aa28.4■■■□□ 2.14
SH3GL3-204ENST00000492099 IRF2BP1Q8IU81 584 aa28.4■■■□□ 2.14
SH3GL3-204ENST00000492099 CCDC33Q8N5R6 958 aa28.4■■■□□ 2.14
SH3GL3-204ENST00000492099 TERB1Q8NA31 727 aa28.4■■■□□ 2.14
SH3GL3-204ENST00000492099 IL17RCQ8NAC3 791 aa28.4■■■□□ 2.14
SH3GL3-204ENST00000492099 NDRG1Q92597 394 aaKnown RBP28.4■■■□□ 2.14
SH3GL3-204ENST00000492099 HSFY1Q96LI6 401 aa28.4■■■□□ 2.14
SH3GL3-204ENST00000492099 DNAJC17Q9NVM6 304 aaKnown RBP28.4■■■□□ 2.14
SH3GL3-204ENST00000492099 SLC12A8A0AV02 714 aa28.39■■■□□ 2.14
SH3GL3-204ENST00000492099 LRP3O75074 770 aa28.39■■■□□ 2.14
SH3GL3-204ENST00000492099 KLKB1P03952 638 aa28.39■■■□□ 2.14
SH3GL3-204ENST00000492099 HMBSP08397 361 aa28.39■■■□□ 2.14
SH3GL3-204ENST00000492099 LCP1P13796 627 aa28.39■■■□□ 2.14
SH3GL3-204ENST00000492099 CORO1AP31146 461 aaKnown RBP28.39■■■□□ 2.14
SH3GL3-204ENST00000492099 ID4P47928 161 aa28.39■■■□□ 2.14
SH3GL3-204ENST00000492099 DGKEP52429 567 aa28.39■■■□□ 2.14
SH3GL3-204ENST00000492099 MFAP3P55082 362 aa28.39■■■□□ 2.14
SH3GL3-204ENST00000492099 BSPRYQ5W0U4 402 aa28.39■■■□□ 2.14
SH3GL3-204ENST00000492099 GRAMD4Q6IC98 578 aa28.39■■■□□ 2.14
SH3GL3-204ENST00000492099 PMF1Q6P1K2 205 aa28.39■■■□□ 2.14
SH3GL3-204ENST00000492099 GBP6Q6ZN66 633 aa28.39■■■□□ 2.14
SH3GL3-204ENST00000492099 ALLCQ8N6M5 410 aa28.39■■■□□ 2.14
SH3GL3-204ENST00000492099 RNF139Q8WU17 664 aa28.39■■■□□ 2.14
SH3GL3-204ENST00000492099 CRACR2AQ9BSW2 395 aa28.39■■■□□ 2.14
SH3GL3-204ENST00000492099 THAP9Q9H5L6 903 aa28.39■■■□□ 2.14
SH3GL3-204ENST00000492099 ABCC13Q9NSE7 274 aa28.39■■■□□ 2.14
SH3GL3-204ENST00000492099 KIAA1549LQ6ZVL6 1849 aa28.39■■■□□ 2.13
SH3GL3-204ENST00000492099 GTPBP10A4D1E9 387 aaKnown RBP28.38■■■□□ 2.13
SH3GL3-204ENST00000492099 ANTXRLA6NF34 631 aa28.38■■■□□ 2.13
SH3GL3-204ENST00000492099 YJEFN3A6XGL0 299 aa28.38■■■□□ 2.13
SH3GL3-204ENST00000492099 E7ENQ6 273 aa28.38■■■□□ 2.13
SH3GL3-204ENST00000492099 KLF8O95600 359 aaPredicted RBP28.38■■■□□ 2.13
SH3GL3-204ENST00000492099 CHRM1P11229 460 aaPredicted RBP28.38■■■□□ 2.13
SH3GL3-204ENST00000492099 KRT5P13647 590 aa28.38■■■□□ 2.13
SH3GL3-204ENST00000492099 ERCC5P28715 1186 aaPredicted RBP28.38■■■□□ 2.13
SH3GL3-204ENST00000492099 MTIF2P46199 727 aaKnown RBP28.38■■■□□ 2.13
SH3GL3-204ENST00000492099 DAOAP59103 153 aa28.38■■■□□ 2.13
SH3GL3-204ENST00000492099 EOGTQ5NDL2 527 aa28.38■■■□□ 2.13
SH3GL3-204ENST00000492099 EMC10Q5UCC4 262 aa28.38■■■□□ 2.13
SH3GL3-204ENST00000492099 TRIM65Q6PJ69 517 aa28.38■■■□□ 2.13
SH3GL3-204ENST00000492099 TRMT11Q7Z4G4 463 aaKnown RBP28.38■■■□□ 2.13
SH3GL3-204ENST00000492099 FAM114A1Q8IWE2 563 aa28.38■■■□□ 2.13
SH3GL3-204ENST00000492099 FAM160A2Q8N612 972 aaPredicted RBP28.38■■■□□ 2.13
SH3GL3-204ENST00000492099 TXNDC5Q8NBS9 432 aaKnown RBP28.38■■■□□ 2.13
SH3GL3-204ENST00000492099 IRGQQ8WZA9 623 aa28.38■■■□□ 2.13
SH3GL3-204ENST00000492099 PLD4Q96BZ4 506 aa28.38■■■□□ 2.13
SH3GL3-204ENST00000492099 LMBRD1Q9NUN5 540 aa28.38■■■□□ 2.13
SH3GL3-204ENST00000492099 SPTBN4Q9H254 2564 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms