RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 NDRG1Q92597 394 aaKnown RBP13.35□□□□□ -0.27
SEC61A1-206ENST00000491668 KAT5Q92993 513 aa13.35□□□□□ -0.27
SEC61A1-206ENST00000491668 OTUB2Q96DC9 234 aa13.35□□□□□ -0.27
SEC61A1-206ENST00000491668 PNKPQ96T60 521 aa13.35□□□□□ -0.27
SEC61A1-206ENST00000491668 FAM124BQ9H5Z6 455 aaPredicted RBP13.35□□□□□ -0.27
SEC61A1-206ENST00000491668 ZDHHC4Q9NPG8 344 aa13.35□□□□□ -0.27
SEC61A1-206ENST00000491668 DLL3Q9NYJ7 618 aa13.35□□□□□ -0.27
SEC61A1-206ENST00000491668 SH3BP1Q9Y3L3 701 aa13.35□□□□□ -0.27
SEC61A1-206ENST00000491668 RNF225M0QZC1 329 aaPredicted RBP13.34□□□□□ -0.27
SEC61A1-206ENST00000491668 PMM2O15305 246 aa13.34□□□□□ -0.27
SEC61A1-206ENST00000491668 HOXC11O43248 304 aaPredicted RBP13.34□□□□□ -0.27
SEC61A1-206ENST00000491668 TULP3O75386 442 aa13.34□□□□□ -0.27
SEC61A1-206ENST00000491668 GABBR2O75899 941 aa13.34□□□□□ -0.27
SEC61A1-206ENST00000491668 AFPP02771 609 aaKnown RBP13.34□□□□□ -0.27
SEC61A1-206ENST00000491668 KLKB1P03952 638 aa13.34□□□□□ -0.27
SEC61A1-206ENST00000491668 RETP07949 1114 aa13.34□□□□□ -0.27
SEC61A1-206ENST00000491668 ATP5C1P36542 298 aaKnown RBP13.34□□□□□ -0.27
SEC61A1-206ENST00000491668 MARSP56192 900 aaKnown RBP13.34□□□□□ -0.27
SEC61A1-206ENST00000491668 KDSRQ06136 332 aa13.34□□□□□ -0.27
SEC61A1-206ENST00000491668 NCAPHQ15003 741 aa13.34□□□□□ -0.27
SEC61A1-206ENST00000491668 GOLGA7BQ2TAP0 167 aa13.34□□□□□ -0.27
SEC61A1-206ENST00000491668 TMEM92Q6UXU6 159 aa13.34□□□□□ -0.27
SEC61A1-206ENST00000491668 Q6ZNB5 142 aa13.34□□□□□ -0.27
SEC61A1-206ENST00000491668 KBTBD6Q86V97 674 aa13.34□□□□□ -0.27
SEC61A1-206ENST00000491668 IRF2BP1Q8IU81 584 aa13.34□□□□□ -0.27
SEC61A1-206ENST00000491668 TRIM59Q8IWR1 403 aa13.34□□□□□ -0.27
SEC61A1-206ENST00000491668 ZNF276Q8N554 614 aa13.34□□□□□ -0.27
SEC61A1-206ENST00000491668 TTC39CQ8N584 583 aa13.34□□□□□ -0.27
SEC61A1-206ENST00000491668 NAT16Q8N8M0 369 aa13.34□□□□□ -0.27
SEC61A1-206ENST00000491668 TFAP2BQ92481 460 aa13.34□□□□□ -0.27
SEC61A1-206ENST00000491668 EXOC4Q96A65 974 aa13.34□□□□□ -0.27
SEC61A1-206ENST00000491668 TUBGCP2Q9BSJ2 902 aa13.34□□□□□ -0.27
SEC61A1-206ENST00000491668 UBXN6Q9BZV1 441 aa13.34□□□□□ -0.27
SEC61A1-206ENST00000491668 NACA2Q9H009 215 aa13.34□□□□□ -0.27
SEC61A1-206ENST00000491668 SPHK2Q9NRA0 654 aa13.34□□□□□ -0.27
SEC61A1-206ENST00000491668 EBF1Q9UH73 591 aa13.34□□□□□ -0.27
SEC61A1-206ENST00000491668 NAGPAQ9UK23 515 aa13.34□□□□□ -0.27
SEC61A1-206ENST00000491668 GMEB2Q9UKD1 530 aa13.34□□□□□ -0.27
SEC61A1-206ENST00000491668 MYO18AQ92614 2054 aaKnown RBP13.33□□□□□ -0.27
SEC61A1-206ENST00000491668 SGK1O00141 431 aa13.33□□□□□ -0.28
SEC61A1-206ENST00000491668 O00370 1275 aa13.33□□□□□ -0.28
SEC61A1-206ENST00000491668 DCLK1O15075 740 aa13.33□□□□□ -0.28
SEC61A1-206ENST00000491668 AXIN1O15169 862 aa13.33□□□□□ -0.28
SEC61A1-206ENST00000491668 ADAM23O75077 832 aa13.33□□□□□ -0.28
SEC61A1-206ENST00000491668 RPP40O75818 363 aaKnown RBP13.33□□□□□ -0.28
SEC61A1-206ENST00000491668 STC2O76061 302 aa13.33□□□□□ -0.28
SEC61A1-206ENST00000491668 APBB3O95704 486 aa13.33□□□□□ -0.28
SEC61A1-206ENST00000491668 SERPINC1P01008 464 aa13.33□□□□□ -0.28
SEC61A1-206ENST00000491668 CALCAP01258 141 aa13.33□□□□□ -0.28
SEC61A1-206ENST00000491668 GRIA2P42262 883 aa13.33□□□□□ -0.28
SEC61A1-206ENST00000491668 GAD2Q05329 585 aa13.33□□□□□ -0.28
SEC61A1-206ENST00000491668 PDE4CQ08493 712 aa13.33□□□□□ -0.28
SEC61A1-206ENST00000491668 KCNH2Q12809 1159 aa13.33□□□□□ -0.28
SEC61A1-206ENST00000491668 MAN2A1Q16706 1144 aa13.33□□□□□ -0.28
SEC61A1-206ENST00000491668 RSPO4Q2I0M5 234 aaPredicted RBP13.33□□□□□ -0.28
SEC61A1-206ENST00000491668 PKDCCQ504Y2 493 aa13.33□□□□□ -0.28
SEC61A1-206ENST00000491668 C10orf120Q5SQS8 335 aa13.33□□□□□ -0.28
SEC61A1-206ENST00000491668 CDKAL1Q5VV42 579 aa13.33□□□□□ -0.28
SEC61A1-206ENST00000491668 RASSF3Q86WH2 238 aa13.33□□□□□ -0.28
SEC61A1-206ENST00000491668 ALLCQ8N6M5 410 aa13.33□□□□□ -0.28
SEC61A1-206ENST00000491668 IL17RCQ8NAC3 791 aa13.33□□□□□ -0.28
SEC61A1-206ENST00000491668 ACDQ96AP0 544 aa13.33□□□□□ -0.28
SEC61A1-206ENST00000491668 ARHGEF4Q9NR80 690 aa13.33□□□□□ -0.28
SEC61A1-206ENST00000491668 TAB2Q9NYJ8 693 aa13.33□□□□□ -0.28
SEC61A1-206ENST00000491668 CLIC5Q9NZA1 410 aa13.33□□□□□ -0.28
SEC61A1-206ENST00000491668 DNMT3LQ9UJW3 386 aa13.33□□□□□ -0.28
SEC61A1-206ENST00000491668 TSPAN16Q9UKR8 245 aa13.33□□□□□ -0.28
SEC61A1-206ENST00000491668 RAB23Q9ULC3 237 aa13.33□□□□□ -0.28
SEC61A1-206ENST00000491668 MMP17Q9ULZ9 603 aa13.33□□□□□ -0.28
SEC61A1-206ENST00000491668 TRIM21P19474 475 aaKnown RBP13.32□□□□□ -0.28
SEC61A1-206ENST00000491668 PSEN1P49768 467 aa13.32□□□□□ -0.28
SEC61A1-206ENST00000491668 MRPS21P82921 87 aaKnown RBP13.32□□□□□ -0.28
SEC61A1-206ENST00000491668 CRY1Q16526 586 aa13.32□□□□□ -0.28
SEC61A1-206ENST00000491668 FILIP1LQ4L180 1135 aa13.32□□□□□ -0.28
SEC61A1-206ENST00000491668 PM20D1Q6GTS8 502 aa13.32□□□□□ -0.28
SEC61A1-206ENST00000491668 CEP68Q76N32 757 aa13.32□□□□□ -0.28
SEC61A1-206ENST00000491668 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.32□□□□□ -0.28
SEC61A1-206ENST00000491668 MIB1Q86YT6 1006 aa13.32□□□□□ -0.28
SEC61A1-206ENST00000491668 ARHGEF19Q8IW93 802 aa13.32□□□□□ -0.28
SEC61A1-206ENST00000491668 GPR161Q8N6U8 529 aaKnown RBP13.32□□□□□ -0.28
SEC61A1-206ENST00000491668 UBA3Q8TBC4 463 aa13.32□□□□□ -0.28
SEC61A1-206ENST00000491668 SECISBP2LQ93073 1101 aaKnown RBP13.32□□□□□ -0.28
SEC61A1-206ENST00000491668 ZC3H10Q96K80 434 aaKnown RBP13.32□□□□□ -0.28
SEC61A1-206ENST00000491668 ULBP1Q9BZM6 244 aa13.32□□□□□ -0.28
SEC61A1-206ENST00000491668 DUSP15Q9H1R2 295 aaPredicted RBP13.32□□□□□ -0.28
SEC61A1-206ENST00000491668 VPS16Q9H269 839 aa13.32□□□□□ -0.28
SEC61A1-206ENST00000491668 SEMA4GQ9NTN9 838 aa13.32□□□□□ -0.28
SEC61A1-206ENST00000491668 MARK1Q9P0L2 795 aa13.32□□□□□ -0.28
SEC61A1-206ENST00000491668 USP18Q9UMW8 372 aa13.32□□□□□ -0.28
SEC61A1-206ENST00000491668 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.32□□□□□ -0.28
SEC61A1-206ENST00000491668 ABCA7Q8IZY2 2146 aa13.31□□□□□ -0.28
SEC61A1-206ENST00000491668 XPO1O14980 1071 aaKnown RBP13.31□□□□□ -0.28
SEC61A1-206ENST00000491668 CACNG3O60359 315 aa13.31□□□□□ -0.28
SEC61A1-206ENST00000491668 LRP3O75074 770 aa13.31□□□□□ -0.28
SEC61A1-206ENST00000491668 KLF8O95600 359 aaPredicted RBP13.31□□□□□ -0.28
SEC61A1-206ENST00000491668 APODP05090 189 aa13.31□□□□□ -0.28
SEC61A1-206ENST00000491668 ZNF18P17022 549 aa13.31□□□□□ -0.28
SEC61A1-206ENST00000491668 TIE1P35590 1138 aa13.31□□□□□ -0.28
SEC61A1-206ENST00000491668 TNFRSF4P43489 277 aa13.31□□□□□ -0.28
SEC61A1-206ENST00000491668 PLA2G4AP47712 749 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms