RNA–Protein interactions for RNA: ENST00000491062.5

FXR1-220, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2 BASIC

Gene FXR1, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-220ENST00000491062 ACKR2O00590 384 aa12.74□□□□□ -0.37
FXR1-220ENST00000491062 KRT36O76013 467 aa12.74□□□□□ -0.37
FXR1-220ENST00000491062 KRT37O76014 449 aa12.74□□□□□ -0.37
FXR1-220ENST00000491062 NPTXRO95502 500 aa12.74□□□□□ -0.37
FXR1-220ENST00000491062 HMGCRP04035 888 aa12.74□□□□□ -0.37
FXR1-220ENST00000491062 TGM2P21980 687 aa12.74□□□□□ -0.37
FXR1-220ENST00000491062 CCNHP51946 323 aaPredicted RBP12.74□□□□□ -0.37
FXR1-220ENST00000491062 CDH6P55285 790 aa12.74□□□□□ -0.37
FXR1-220ENST00000491062 SLC34A1Q06495 639 aa12.74□□□□□ -0.37
FXR1-220ENST00000491062 MTM1Q13496 603 aa12.74□□□□□ -0.37
FXR1-220ENST00000491062 CCDC6Q16204 474 aa12.74□□□□□ -0.37
FXR1-220ENST00000491062 DBN1Q16643 649 aa12.74□□□□□ -0.37
FXR1-220ENST00000491062 TEX44Q53QW1 395 aa12.74□□□□□ -0.37
FXR1-220ENST00000491062 ATF7IP2Q5U623 682 aa12.74□□□□□ -0.37
FXR1-220ENST00000491062 PRPF39Q86UA1 669 aaKnown RBP12.74□□□□□ -0.37
FXR1-220ENST00000491062 VPS52Q8N1B4 723 aa12.74□□□□□ -0.37
FXR1-220ENST00000491062 RNF149Q8NC42 400 aa12.74□□□□□ -0.37
FXR1-220ENST00000491062 MCUQ8NE86 351 aa12.74□□□□□ -0.37
FXR1-220ENST00000491062 ARMC2Q8NEN0 867 aa12.74□□□□□ -0.37
FXR1-220ENST00000491062 MTBPQ96DY7 904 aa12.74□□□□□ -0.37
FXR1-220ENST00000491062 RNF157Q96PX1 679 aa12.74□□□□□ -0.37
FXR1-220ENST00000491062 TWNKQ96RR1 684 aa12.74□□□□□ -0.37
FXR1-220ENST00000491062 ADPGKQ9BRR6 497 aa12.74□□□□□ -0.37
FXR1-220ENST00000491062 NMUR2Q9GZQ4 415 aa12.74□□□□□ -0.37
FXR1-220ENST00000491062 IQCGQ9H095 443 aaKnown RBP12.74□□□□□ -0.37
FXR1-220ENST00000491062 FZD8Q9H461 694 aa12.74□□□□□ -0.37
FXR1-220ENST00000491062 SMYD3Q9H7B4 428 aa12.74□□□□□ -0.37
FXR1-220ENST00000491062 PLSCR2Q9NRY7 297 aa12.74□□□□□ -0.37
FXR1-220ENST00000491062 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.74□□□□□ -0.37
FXR1-220ENST00000491062 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.74□□□□□ -0.37
FXR1-220ENST00000491062 STK32BQ9NY57 414 aa12.74□□□□□ -0.37
FXR1-220ENST00000491062 HOXC10Q9NYD6 342 aa12.74□□□□□ -0.37
FXR1-220ENST00000491062 SIRPGQ9P1W8 387 aa12.74□□□□□ -0.37
FXR1-220ENST00000491062 PLLPQ9Y342 182 aa12.74□□□□□ -0.37
FXR1-220ENST00000491062 BCLAF3A2AJT9 711 aaKnown RBP12.73□□□□□ -0.37
FXR1-220ENST00000491062 ZBTB42B2RXF5 422 aa12.73□□□□□ -0.37
FXR1-220ENST00000491062 E5RJQ4 531 aa12.73□□□□□ -0.37
FXR1-220ENST00000491062 F8W8V4 182 aa12.73□□□□□ -0.37
FXR1-220ENST00000491062 H7C0C1 242 aa12.73□□□□□ -0.37
FXR1-220ENST00000491062 M0QYV0 167 aa12.73□□□□□ -0.37
FXR1-220ENST00000491062 LGR5O75473 907 aa12.73□□□□□ -0.37
FXR1-220ENST00000491062 VDRP11473 427 aa12.73□□□□□ -0.37
FXR1-220ENST00000491062 NEFHP12036 1026 aa12.73□□□□□ -0.37
FXR1-220ENST00000491062 CTHP32929 405 aa12.73□□□□□ -0.37
FXR1-220ENST00000491062 TCF7P36402 384 aaPredicted RBP12.73□□□□□ -0.37
FXR1-220ENST00000491062 GPD2P43304 727 aa12.73□□□□□ -0.37
FXR1-220ENST00000491062 ATP5OP48047 213 aa12.73□□□□□ -0.37
FXR1-220ENST00000491062 HIRAP54198 1017 aaPredicted RBP12.73□□□□□ -0.37
FXR1-220ENST00000491062 NRLP54845 237 aa12.73□□□□□ -0.37
FXR1-220ENST00000491062 PDK2Q15119 407 aa12.73□□□□□ -0.37
FXR1-220ENST00000491062 ZRSR2Q15696 482 aaKnown RBP12.73□□□□□ -0.37
FXR1-220ENST00000491062 PTPRNQ16849 979 aa12.73□□□□□ -0.37
FXR1-220ENST00000491062 FAM102AQ5T9C2 384 aaPredicted RBP12.73□□□□□ -0.37
FXR1-220ENST00000491062 LGSNQ5TDP6 509 aa12.73□□□□□ -0.37
FXR1-220ENST00000491062 SNX30Q5VWJ9 437 aa12.73□□□□□ -0.37
FXR1-220ENST00000491062 ATG16L1Q676U5 607 aa12.73□□□□□ -0.37
FXR1-220ENST00000491062 TRNP1Q6NT89 227 aa12.73□□□□□ -0.37
FXR1-220ENST00000491062 METTL7BQ6UX53 244 aa12.73□□□□□ -0.37
FXR1-220ENST00000491062 C4orf22Q6V702 233 aa12.73□□□□□ -0.37
FXR1-220ENST00000491062 LRRC74BQ6ZQY2 392 aa12.73□□□□□ -0.37
FXR1-220ENST00000491062 CDHR3Q6ZTQ4 885 aa12.73□□□□□ -0.37
FXR1-220ENST00000491062 TTC7BQ86TV6 843 aa12.73□□□□□ -0.37
FXR1-220ENST00000491062 C1orf127Q8N9H9 656 aa12.73□□□□□ -0.37
FXR1-220ENST00000491062 CXorf38Q8TB03 319 aa12.73□□□□□ -0.37
FXR1-220ENST00000491062 TEKT4Q8WW24 435 aa12.73□□□□□ -0.37
FXR1-220ENST00000491062 CFAP36Q96G28 342 aa12.73□□□□□ -0.37
FXR1-220ENST00000491062 TMEM176AQ96HP8 235 aa12.73□□□□□ -0.37
FXR1-220ENST00000491062 MIS12Q9H081 205 aa12.73□□□□□ -0.37
FXR1-220ENST00000491062 WWP1Q9H0M0 922 aa12.73□□□□□ -0.37
FXR1-220ENST00000491062 CDT1Q9H211 546 aa12.73□□□□□ -0.37
FXR1-220ENST00000491062 FAM124BQ9H5Z6 455 aaPredicted RBP12.73□□□□□ -0.37
FXR1-220ENST00000491062 PLAC1Q9HBJ0 212 aa12.73□□□□□ -0.37
FXR1-220ENST00000491062 ZNF212Q9UDV6 495 aa12.73□□□□□ -0.37
FXR1-220ENST00000491062 HMGXB4Q9UGU5 601 aa12.73□□□□□ -0.37
FXR1-220ENST00000491062 PTPRFP10586 1907 aa12.72□□□□□ -0.37
FXR1-220ENST00000491062 DPPA5A6NC42 116 aa12.72□□□□□ -0.37
FXR1-220ENST00000491062 ZNF487B1APH4 448 aa12.72□□□□□ -0.37
FXR1-220ENST00000491062 PPP1R12AO14974 1030 aaPredicted RBP12.72□□□□□ -0.37
FXR1-220ENST00000491062 SRGAP2CP0DJJ0 459 aa12.72□□□□□ -0.37
FXR1-220ENST00000491062 TGFB3P10600 412 aa12.72□□□□□ -0.37
FXR1-220ENST00000491062 ATICP31939 592 aa12.72□□□□□ -0.37
FXR1-220ENST00000491062 MAGEA3P43357 314 aa12.72□□□□□ -0.37
FXR1-220ENST00000491062 MRPS5P82675 430 aaKnown RBP12.72□□□□□ -0.37
FXR1-220ENST00000491062 AP1B1Q10567 949 aa12.72□□□□□ -0.37
FXR1-220ENST00000491062 TBCCQ15814 346 aa12.72□□□□□ -0.37
FXR1-220ENST00000491062 NOL9Q5SY16 702 aaKnown RBP12.72□□□□□ -0.37
FXR1-220ENST00000491062 EEF1DP3Q658K8 133 aa12.72□□□□□ -0.37
FXR1-220ENST00000491062 ZC3H18Q86VM9 953 aaKnown RBP12.72□□□□□ -0.37
FXR1-220ENST00000491062 CAND1Q86VP6 1230 aaKnown RBP12.72□□□□□ -0.37
FXR1-220ENST00000491062 PPM1NQ8N819 430 aa12.72□□□□□ -0.37
FXR1-220ENST00000491062 CCDC110Q8TBZ0 833 aa12.72□□□□□ -0.37
FXR1-220ENST00000491062 WDR60Q8WVS4 1066 aa12.72□□□□□ -0.37
FXR1-220ENST00000491062 NRG4Q8WWG1 115 aa12.72□□□□□ -0.37
FXR1-220ENST00000491062 KLC2Q9H0B6 622 aa12.72□□□□□ -0.37
FXR1-220ENST00000491062 RPF1Q9H9Y2 349 aaKnown RBP12.72□□□□□ -0.37
FXR1-220ENST00000491062 RAB6BQ9NRW1 208 aa12.72□□□□□ -0.37
FXR1-220ENST00000491062 ZC3H7BQ9UGR2 993 aaKnown RBP12.72□□□□□ -0.37
FXR1-220ENST00000491062 TNFSF13BQ9Y275 285 aa12.72□□□□□ -0.37
FXR1-220ENST00000491062 FCF1Q9Y324 198 aaKnown RBP12.72□□□□□ -0.37
FXR1-220ENST00000491062 FAM237BA0A1B0GVD1 139 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms