RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 AGR3Q8TD06 166 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 DDIT4Q9NX09 232 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 A0A087X1B8 175 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 SMIM31A0A1B0GVY4 71 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 M0QYT0 321 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 POLRMTO00411 1230 aaKnown RBP9.11□□□□□ -0.95
LSAMP-205ENST00000490035 PROSCO94903 275 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 PAEPP09466 180 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 TNFRSF8P28908 595 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 RAD9BQ6WBX8 426 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 ZNF410Q86VK4 478 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 KLHL3Q9UH77 587 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 TPRKBQ9Y3C4 175 aa9.11□□□□□ -0.95
LSAMP-205ENST00000490035 A0A088AWK7 358 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 THP07101 528 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 ZNF10P21506 573 aaPredicted RBP9.1□□□□□ -0.95
LSAMP-205ENST00000490035 RGS7P49802 495 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 GCNT1Q02742 428 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 MGAT5Q09328 741 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 ZPBP2Q6X784 338 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 ZNF398Q8TD17 642 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 RMDN2Q96LZ7 410 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 DEPDC7Q96QD5 511 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 SEPT5Q99719 369 aaPredicted RBP9.1□□□□□ -0.95
LSAMP-205ENST00000490035 SH3GL2Q99962 352 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 ASB7Q9H672 318 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 UXTQ9UBK9 157 aaPredicted RBP9.1□□□□□ -0.95
LSAMP-205ENST00000490035 NPHP3-ACAD11A0A0J9YXS1 232 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 STX11O75558 287 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 SERPINH1P50454 418 aaKnown RBP9.1□□□□□ -0.95
LSAMP-205ENST00000490035 MPP3Q13368 585 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 CCDC103Q8IW40 242 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 DPP10Q8N608 796 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 FAM45AQ8TCE6 357 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 PANX3Q96QZ0 392 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 HEY2Q9UBP5 337 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 VANGL2Q9ULK5 521 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 RUVBL2Q9Y230 463 aaKnown RBP9.1□□□□□ -0.95
LSAMP-205ENST00000490035 A0A087WZ62 844 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 DDHD2O94830 711 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 CLPTM1O96005 669 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 OR1G1P47890 313 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 PCSK7Q16549 785 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 C9orf16Q9BUW7 83 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 NMRAL1Q9HBL8 299 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 BARX2Q9UMQ3 279 aaPredicted RBP9.1□□□□□ -0.95
LSAMP-205ENST00000490035 ACTL7BQ9Y614 415 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 VWDEQ8N2E2 1590 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 NBPF26B4DH59 902 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 SCTRP47872 440 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 USP39Q53GS9 565 aaKnown RBP9.1□□□□□ -0.95
LSAMP-205ENST00000490035 MROH9Q5TGP6 573 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 PRR5LQ6MZQ0 368 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 TMEM176AQ96HP8 235 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 SLC39A8Q9C0K1 460 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 NEK6Q9HC98 313 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 KPNA4O00629 521 aaPredicted RBP9.1□□□□□ -0.95
LSAMP-205ENST00000490035 RAD51BO15315 384 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 CYP1A1P04798 512 aaPredicted RBP9.1□□□□□ -0.95
LSAMP-205ENST00000490035 SERPIND1P05546 499 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 PTPN3P26045 913 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 SKIV2L2P42285 1042 aaKnown RBP9.1□□□□□ -0.95
LSAMP-205ENST00000490035 PMS1P54277 932 aaKnown RBP9.1□□□□□ -0.95
LSAMP-205ENST00000490035 ERMARDQ5T6L9 678 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 ZCCHC17Q9NP64 241 aaKnown RBP9.1□□□□□ -0.95
LSAMP-205ENST00000490035 CCDC88AQ3V6T2 1871 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 QSOX1O00391 747 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 KPNA5O15131 536 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 AP1G2O75843 785 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 SUPT7LO94864 414 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 ERBB2P04626 1255 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 UQCRBP14927 111 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 MSH3P20585 1137 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 MAPK9P45984 424 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 TOP3AQ13472 1001 aaPredicted RBP9.1□□□□□ -0.95
LSAMP-205ENST00000490035 NKX1-1Q15270 411 aaPredicted RBP9.1□□□□□ -0.95
LSAMP-205ENST00000490035 RASA2Q15283 850 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 FGD2Q7Z6J4 655 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 NBPF15Q8N660 670 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 GINS4Q9BRT9 223 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 LRCH1Q9Y2L9 728 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 KLHL20Q9Y2M5 609 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 PCDHGC5Q9Y5F6 944 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 TNPO3Q9Y5L0 923 aaKnown RBP9.1□□□□□ -0.95
LSAMP-205ENST00000490035 H3BQF6 201 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 H2AFXP16104 143 aaPredicted RBP9.1□□□□□ -0.95
LSAMP-205ENST00000490035 CDH17Q12864 832 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 PTPAQ15257 358 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 L3MBTL3Q96JM7 780 aaPredicted RBP9.1□□□□□ -0.95
LSAMP-205ENST00000490035 QRFPRQ96P65 431 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 MROH7Q68CQ1 1323 aa9.1□□□□□ -0.95
LSAMP-205ENST00000490035 MED26O95402 600 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 TTI2Q6NXR4 508 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 ZNF720Q7Z2F6 126 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 EVA1BQ9NVM1 165 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 RPL26L1Q9UNX3 145 aaKnown RBP9.09□□□□□ -0.95
LSAMP-205ENST00000490035 CCDC189A1A4V9 331 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 IFRD1O00458 451 aaPredicted RBP9.09□□□□□ -0.95
LSAMP-205ENST00000490035 CCR1P32246 355 aa9.09□□□□□ -0.95
LSAMP-205ENST00000490035 PEX6Q13608 980 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms