RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 TPM2P07951 284 aa20.03■□□□□ 0.8
EPHB4-207ENST00000489808 ADH5P11766 374 aa20.03■□□□□ 0.8
EPHB4-207ENST00000489808 CLCN1P35523 988 aa20.03■□□□□ 0.8
EPHB4-207ENST00000489808 ACADSBP45954 432 aa20.03■□□□□ 0.8
EPHB4-207ENST00000489808 SLC6A11P48066 632 aa20.03■□□□□ 0.8
EPHB4-207ENST00000489808 SATB1Q01826 763 aa20.03■□□□□ 0.8
EPHB4-207ENST00000489808 DRAP1Q14919 205 aaPredicted RBP20.03■□□□□ 0.8
EPHB4-207ENST00000489808 TSSK4Q6SA08 328 aa20.03■□□□□ 0.8
EPHB4-207ENST00000489808 Q6ZNB5 142 aa20.03■□□□□ 0.8
EPHB4-207ENST00000489808 ALYREFQ86V81 257 aaKnown RBP20.03■□□□□ 0.8
EPHB4-207ENST00000489808 EDEM1Q92611 657 aa20.03■□□□□ 0.8
EPHB4-207ENST00000489808 EZH1Q92800 747 aaPredicted RBP20.03■□□□□ 0.8
EPHB4-207ENST00000489808 NELL1Q92832 810 aa20.03■□□□□ 0.8
EPHB4-207ENST00000489808 LSM14BQ9BX40 385 aaKnown RBP20.03■□□□□ 0.8
EPHB4-207ENST00000489808 NAA15Q9BXJ9 866 aaKnown RBP20.03■□□□□ 0.8
EPHB4-207ENST00000489808 SLC4A5Q9BY07 1137 aa20.03■□□□□ 0.8
EPHB4-207ENST00000489808 MIS12Q9H081 205 aa20.03■□□□□ 0.8
EPHB4-207ENST00000489808 ST7Q9NRC1 585 aa20.03■□□□□ 0.8
EPHB4-207ENST00000489808 OLA1Q9NTK5 396 aaKnown RBP20.03■□□□□ 0.8
EPHB4-207ENST00000489808 LIMA1Q9UHB6 759 aaKnown RBP20.03■□□□□ 0.8
EPHB4-207ENST00000489808 SLC12A8A0AV02 714 aa20.02■□□□□ 0.8
EPHB4-207ENST00000489808 HMBSP08397 361 aa20.02■□□□□ 0.8
EPHB4-207ENST00000489808 UCHL3P15374 230 aa20.02■□□□□ 0.8
EPHB4-207ENST00000489808 ZNF18P17022 549 aa20.02■□□□□ 0.8
EPHB4-207ENST00000489808 CDK11BP21127 795 aaKnown RBP20.02■□□□□ 0.8
EPHB4-207ENST00000489808 HOXD11P31277 338 aaPredicted RBP20.02■□□□□ 0.8
EPHB4-207ENST00000489808 MRE11P49959 708 aa20.02■□□□□ 0.8
EPHB4-207ENST00000489808 COPB1P53618 953 aaKnown RBP20.02■□□□□ 0.8
EPHB4-207ENST00000489808 PPP2R5DQ14738 602 aa20.02■□□□□ 0.8
EPHB4-207ENST00000489808 TMEM110Q86TL2 294 aa20.02■□□□□ 0.8
EPHB4-207ENST00000489808 SCUBE3Q8IX30 993 aa20.02■□□□□ 0.8
EPHB4-207ENST00000489808 WDTC1Q8N5D0 677 aa20.02■□□□□ 0.8
EPHB4-207ENST00000489808 ANKRD20A12PQ8NF67 263 aa20.02■□□□□ 0.8
EPHB4-207ENST00000489808 CLEC4CQ8WTT0 213 aa20.02■□□□□ 0.8
EPHB4-207ENST00000489808 RNF139Q8WU17 664 aa20.02■□□□□ 0.8
EPHB4-207ENST00000489808 DCLK3Q9C098 648 aa20.02■□□□□ 0.8
EPHB4-207ENST00000489808 NAT10Q9H0A0 1025 aaKnown RBP20.02■□□□□ 0.8
EPHB4-207ENST00000489808 HSD3B7Q9H2F3 369 aa20.02■□□□□ 0.8
EPHB4-207ENST00000489808 PLCB1Q9NQ66 1216 aa20.02■□□□□ 0.8
EPHB4-207ENST00000489808 C2orf42Q9NWW7 574 aa20.02■□□□□ 0.8
EPHB4-207ENST00000489808 CYTH4Q9UIA0 394 aa20.02■□□□□ 0.8
EPHB4-207ENST00000489808 PCDHGC3Q9UN70 934 aa20.02■□□□□ 0.8
EPHB4-207ENST00000489808 ZNF510Q9Y2H8 683 aa20.02■□□□□ 0.8
EPHB4-207ENST00000489808 FHOD1Q9Y613 1164 aa20.02■□□□□ 0.8
EPHB4-207ENST00000489808 R4GN57 208 aa20.02■□□□□ 0.8
EPHB4-207ENST00000489808 A0A0A0MRY4 1105 aa20.01■□□□□ 0.79
EPHB4-207ENST00000489808 CHURC1-FNTBB4DL54 471 aa20.01■□□□□ 0.79
EPHB4-207ENST00000489808 HOXC11O43248 304 aaPredicted RBP20.01■□□□□ 0.79
EPHB4-207ENST00000489808 ATG13O75143 517 aa20.01■□□□□ 0.79
EPHB4-207ENST00000489808 RNF40O75150 1001 aa20.01■□□□□ 0.79
EPHB4-207ENST00000489808 PAPSS2O95340 614 aaPredicted RBP20.01■□□□□ 0.79
EPHB4-207ENST00000489808 PNMA6AP0CW24 399 aaPredicted RBP20.01■□□□□ 0.79
EPHB4-207ENST00000489808 TDGF1P13385 188 aa20.01■□□□□ 0.79
EPHB4-207ENST00000489808 EIF2DP41214 584 aaKnown RBP20.01■□□□□ 0.79
EPHB4-207ENST00000489808 BPIFB4P59827 614 aa20.01■□□□□ 0.79
EPHB4-207ENST00000489808 RAPGEF1Q13905 1077 aa20.01■□□□□ 0.79
EPHB4-207ENST00000489808 KLHL40Q2TBA0 621 aa20.01■□□□□ 0.79
EPHB4-207ENST00000489808 ANO6Q4KMQ2 910 aa20.01■□□□□ 0.79
EPHB4-207ENST00000489808 FKBP15Q5T1M5 1219 aa20.01■□□□□ 0.79
EPHB4-207ENST00000489808 PKN3Q6P5Z2 889 aa20.01■□□□□ 0.79
EPHB4-207ENST00000489808 SLC47A2Q86VL8 602 aa20.01■□□□□ 0.79
EPHB4-207ENST00000489808 C12orf40Q86WS4 652 aa20.01■□□□□ 0.79
EPHB4-207ENST00000489808 FMNL3Q8IVF7 1028 aa20.01■□□□□ 0.79
EPHB4-207ENST00000489808 PNKPQ96T60 521 aa20.01■□□□□ 0.79
EPHB4-207ENST00000489808 FAM126AQ9BYI3 521 aaPredicted RBP20.01■□□□□ 0.79
EPHB4-207ENST00000489808 STK33Q9BYT3 514 aa20.01■□□□□ 0.79
EPHB4-207ENST00000489808 LHX5Q9H2C1 402 aa20.01■□□□□ 0.79
EPHB4-207ENST00000489808 ZSCAN32Q9NX65 697 aa20.01■□□□□ 0.79
EPHB4-207ENST00000489808 SFMBT1Q9UHJ3 866 aa20.01■□□□□ 0.79
EPHB4-207ENST00000489808 PATJQ8NI35 1801 aa20.01■□□□□ 0.79
EPHB4-207ENST00000489808 MIA3Q5JRA6 1907 aa20■□□□□ 0.79
EPHB4-207ENST00000489808 K7EQS6 105 aa20■□□□□ 0.79
EPHB4-207ENST00000489808 LTFP02788 710 aa20■□□□□ 0.79
EPHB4-207ENST00000489808 CORO1AP31146 461 aaKnown RBP20■□□□□ 0.79
EPHB4-207ENST00000489808 KRT9P35527 623 aa20■□□□□ 0.79
EPHB4-207ENST00000489808 NRLP54845 237 aa20■□□□□ 0.79
EPHB4-207ENST00000489808 TRIP4Q15650 581 aaPredicted RBP20■□□□□ 0.79
EPHB4-207ENST00000489808 ANO4Q32M45 955 aa20■□□□□ 0.79
EPHB4-207ENST00000489808 ETFBKMTQ8IXQ9 262 aa20■□□□□ 0.79
EPHB4-207ENST00000489808 NAT16Q8N8M0 369 aa20■□□□□ 0.79
EPHB4-207ENST00000489808 CCDC26Q8TAB7 109 aa20■□□□□ 0.79
EPHB4-207ENST00000489808 BPIFA3Q9BQP9 254 aa20■□□□□ 0.79
EPHB4-207ENST00000489808 SEMA4AQ9H3S1 761 aa20■□□□□ 0.79
EPHB4-207ENST00000489808 WDR35Q9P2L0 1181 aa20■□□□□ 0.79
EPHB4-207ENST00000489808 AGO1Q9UL18 857 aaKnown RBP20■□□□□ 0.79
EPHB4-207ENST00000489808 HBS1LQ9Y450 684 aaKnown RBP20■□□□□ 0.79
EPHB4-207ENST00000489808 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.99■□□□□ 0.79
EPHB4-207ENST00000489808 K7ESF4 209 aa19.99■□□□□ 0.79
EPHB4-207ENST00000489808 KLK7P49862 253 aa19.99■□□□□ 0.79
EPHB4-207ENST00000489808 MESP2Q0VG99 397 aa19.99■□□□□ 0.79
EPHB4-207ENST00000489808 ZC3H14Q6PJT7 736 aaKnown RBP19.99■□□□□ 0.79
EPHB4-207ENST00000489808 TPGS1Q6ZTW0 290 aa19.99■□□□□ 0.79
EPHB4-207ENST00000489808 AOPEPQ8N6M6 819 aa19.99■□□□□ 0.79
EPHB4-207ENST00000489808 ZBTB44Q8NCP5 570 aa19.99■□□□□ 0.79
EPHB4-207ENST00000489808 ATRIPQ8WXE1 791 aa19.99■□□□□ 0.79
EPHB4-207ENST00000489808 GOLGA1Q92805 767 aa19.99■□□□□ 0.79
EPHB4-207ENST00000489808 GANQ9H2C0 597 aa19.99■□□□□ 0.79
EPHB4-207ENST00000489808 MARK1Q9P0L2 795 aa19.99■□□□□ 0.79
EPHB4-207ENST00000489808 PCDHGA2Q9Y5H1 932 aa19.99■□□□□ 0.79
EPHB4-207ENST00000489808 SMTNL1A8MU46 457 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms