RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 A0A1W2PQH9 124 aa14.76□□□□□ -0.05
VPS26A-205ENST00000489656 EFCAB8A8MWE9 144 aa14.76□□□□□ -0.05
VPS26A-205ENST00000489656 H3BNC9 293 aa14.76□□□□□ -0.05
VPS26A-205ENST00000489656 F9P00740 461 aa14.76□□□□□ -0.05
VPS26A-205ENST00000489656 FGGP02679 453 aa14.76□□□□□ -0.05
VPS26A-205ENST00000489656 CSH1P0DML2 217 aa14.76□□□□□ -0.05
VPS26A-205ENST00000489656 CSH2P0DML3 217 aa14.76□□□□□ -0.05
VPS26A-205ENST00000489656 TFE3P19532 575 aaPredicted RBP14.76□□□□□ -0.05
VPS26A-205ENST00000489656 DNAJB1P25685 340 aa14.76□□□□□ -0.05
VPS26A-205ENST00000489656 ELF1P32519 619 aa14.76□□□□□ -0.05
VPS26A-205ENST00000489656 RDXP35241 583 aaKnown RBP14.76□□□□□ -0.05
VPS26A-205ENST00000489656 CETN2P41208 172 aa14.76□□□□□ -0.05
VPS26A-205ENST00000489656 ALDH1A3P47895 512 aa14.76□□□□□ -0.05
VPS26A-205ENST00000489656 AIF1P55008 147 aa14.76□□□□□ -0.05
VPS26A-205ENST00000489656 IFRD2Q12894 506 aaPredicted RBP14.76□□□□□ -0.05
VPS26A-205ENST00000489656 PLD1Q13393 1074 aa14.76□□□□□ -0.05
VPS26A-205ENST00000489656 ZNF211Q13398 564 aaPredicted RBP14.76□□□□□ -0.05
VPS26A-205ENST00000489656 EIF4EBP2Q13542 120 aaPredicted RBP14.76□□□□□ -0.05
VPS26A-205ENST00000489656 RAB30Q15771 203 aa14.76□□□□□ -0.05
VPS26A-205ENST00000489656 PPP2R5EQ16537 467 aa14.76□□□□□ -0.05
VPS26A-205ENST00000489656 RAB6CQ53S08 254 aa14.76□□□□□ -0.05
VPS26A-205ENST00000489656 SNX30Q5VWJ9 437 aa14.76□□□□□ -0.05
VPS26A-205ENST00000489656 SLC13A5Q86YT5 568 aaPredicted RBP14.76□□□□□ -0.05
VPS26A-205ENST00000489656 PDZD8Q8NEN9 1154 aa14.76□□□□□ -0.05
VPS26A-205ENST00000489656 SPATA4Q8NEY3 305 aa14.76□□□□□ -0.05
VPS26A-205ENST00000489656 FBXO32Q969P5 355 aa14.76□□□□□ -0.05
VPS26A-205ENST00000489656 SLITRK1Q96PX8 696 aa14.76□□□□□ -0.05
VPS26A-205ENST00000489656 RAB6CQ9H0N0 254 aa14.76□□□□□ -0.05
VPS26A-205ENST00000489656 SMOC2Q9H3U7 446 aa14.76□□□□□ -0.05
VPS26A-205ENST00000489656 NMUR1Q9HB89 426 aa14.76□□□□□ -0.05
VPS26A-205ENST00000489656 TLR8Q9NR97 1041 aaKnown RBP14.76□□□□□ -0.05
VPS26A-205ENST00000489656 EFR3BQ9Y2G0 817 aa14.76□□□□□ -0.05
VPS26A-205ENST00000489656 INSL5Q9Y5Q6 135 aa14.76□□□□□ -0.05
VPS26A-205ENST00000489656 TNRC18O15417 2968 aaPredicted RBP14.76□□□□□ -0.05
VPS26A-205ENST00000489656 CHD7Q9P2D1 2997 aa14.76□□□□□ -0.05
VPS26A-205ENST00000489656 NOTCH4Q99466 2003 aa14.75□□□□□ -0.05
VPS26A-205ENST00000489656 PDE4DIPQ5VU43 2346 aa14.75□□□□□ -0.05
VPS26A-205ENST00000489656 TRANK1O15050 2925 aa14.75□□□□□ -0.05
VPS26A-205ENST00000489656 C3orf70A6NLC5 250 aaPredicted RBP14.75□□□□□ -0.05
VPS26A-205ENST00000489656 ZNF487B1APH4 448 aa14.75□□□□□ -0.05
VPS26A-205ENST00000489656 H0YGN5 161 aa14.75□□□□□ -0.05
VPS26A-205ENST00000489656 CCDC188H7C350 402 aa14.75□□□□□ -0.05
VPS26A-205ENST00000489656 M0QYT0 321 aa14.75□□□□□ -0.05
VPS26A-205ENST00000489656 PRRG1O14668 218 aa14.75□□□□□ -0.05
VPS26A-205ENST00000489656 GRM6O15303 877 aa14.75□□□□□ -0.05
VPS26A-205ENST00000489656 CTIFO43310 598 aaKnown RBP14.75□□□□□ -0.05
VPS26A-205ENST00000489656 TGM5O43548 720 aa14.75□□□□□ -0.05
VPS26A-205ENST00000489656 KRT1P04264 644 aa14.75□□□□□ -0.05
VPS26A-205ENST00000489656 RARAP10276 462 aa14.75□□□□□ -0.05
VPS26A-205ENST00000489656 HMGA1P17096 107 aaKnown RBP14.75□□□□□ -0.05
VPS26A-205ENST00000489656 GJC1P36383 396 aa14.75□□□□□ -0.05
VPS26A-205ENST00000489656 ARSEP51690 589 aa14.75□□□□□ -0.05
VPS26A-205ENST00000489656 PITX1P78337 314 aaPredicted RBP14.75□□□□□ -0.05
VPS26A-205ENST00000489656 DEUP1Q05D60 604 aa14.75□□□□□ -0.05
VPS26A-205ENST00000489656 TAF10Q12962 218 aa14.75□□□□□ -0.05
VPS26A-205ENST00000489656 MTMR3Q13615 1198 aa14.75□□□□□ -0.05
VPS26A-205ENST00000489656 CAMK1Q14012 370 aa14.75□□□□□ -0.05
VPS26A-205ENST00000489656 ATP13A4Q4VNC1 1196 aa14.75□□□□□ -0.05
VPS26A-205ENST00000489656 ERMARDQ5T6L9 678 aa14.75□□□□□ -0.05
VPS26A-205ENST00000489656 AADACL2Q6P093 401 aa14.75□□□□□ -0.05
VPS26A-205ENST00000489656 RSRC2Q7L4I2 434 aaKnown RBP14.75□□□□□ -0.05
VPS26A-205ENST00000489656 SPRED2Q7Z698 418 aa14.75□□□□□ -0.05
VPS26A-205ENST00000489656 LRRN4CLQ8ND94 238 aa14.75□□□□□ -0.05
VPS26A-205ENST00000489656 GPR152Q8TDT2 470 aa14.75□□□□□ -0.05
VPS26A-205ENST00000489656 DQX1Q8TE96 717 aaKnown RBP14.75□□□□□ -0.05
VPS26A-205ENST00000489656 MAIP1Q8WWC4 291 aa14.75□□□□□ -0.05
VPS26A-205ENST00000489656 NTAN1Q96AB6 310 aa14.75□□□□□ -0.05
VPS26A-205ENST00000489656 PBX4Q9BYU1 374 aa14.75□□□□□ -0.05
VPS26A-205ENST00000489656 LMAN2LQ9H0V9 348 aa14.75□□□□□ -0.05
VPS26A-205ENST00000489656 ZWILCHQ9H900 591 aa14.75□□□□□ -0.05
VPS26A-205ENST00000489656 WDR6Q9NNW5 1121 aaKnown RBP14.75□□□□□ -0.05
VPS26A-205ENST00000489656 OLA1Q9NTK5 396 aaKnown RBP14.75□□□□□ -0.05
VPS26A-205ENST00000489656 SMARCAL1Q9NZC9 954 aa14.75□□□□□ -0.05
VPS26A-205ENST00000489656 GMIPQ9P107 970 aa14.75□□□□□ -0.05
VPS26A-205ENST00000489656 CALCOCO1Q9P1Z2 691 aa14.75□□□□□ -0.05
VPS26A-205ENST00000489656 PCSK1NQ9UHG2 260 aa14.75□□□□□ -0.05
VPS26A-205ENST00000489656 ASB3Q9Y575 518 aa14.75□□□□□ -0.05
VPS26A-205ENST00000489656 MYO9BQ13459 2157 aa14.75□□□□□ -0.05
VPS26A-205ENST00000489656 HIDE1A8MVS5 230 aa14.74□□□□□ -0.05
VPS26A-205ENST00000489656 LPXNO60711 386 aa14.74□□□□□ -0.05
VPS26A-205ENST00000489656 KDELR1P24390 212 aa14.74□□□□□ -0.05
VPS26A-205ENST00000489656 GBP1P32455 592 aa14.74□□□□□ -0.05
VPS26A-205ENST00000489656 CDKN2BP42772 138 aa14.74□□□□□ -0.05
VPS26A-205ENST00000489656 CXCR3P49682 368 aa14.74□□□□□ -0.05
VPS26A-205ENST00000489656 PGFP49763 221 aa14.74□□□□□ -0.05
VPS26A-205ENST00000489656 EPHB3P54753 998 aa14.74□□□□□ -0.05
VPS26A-205ENST00000489656 SCAPQ12770 1279 aa14.74□□□□□ -0.05
VPS26A-205ENST00000489656 KLF1Q13351 362 aaPredicted RBP14.74□□□□□ -0.05
VPS26A-205ENST00000489656 NNTQ13423 1086 aa14.74□□□□□ -0.05
VPS26A-205ENST00000489656 GPM6BQ13491 265 aa14.74□□□□□ -0.05
VPS26A-205ENST00000489656 VEPH1Q14D04 833 aa14.74□□□□□ -0.05
VPS26A-205ENST00000489656 PDK2Q15119 407 aa14.74□□□□□ -0.05
VPS26A-205ENST00000489656 DPYSL2Q16555 572 aa14.74□□□□□ -0.05
VPS26A-205ENST00000489656 LONRF2Q1L5Z9 754 aa14.74□□□□□ -0.05
VPS26A-205ENST00000489656 PLPP4Q5VZY2 271 aa14.74□□□□□ -0.05
VPS26A-205ENST00000489656 MFSD7Q6UXD7 560 aa14.74□□□□□ -0.05
VPS26A-205ENST00000489656 SPOCD1Q6ZMY3 1216 aa14.74□□□□□ -0.05
VPS26A-205ENST00000489656 CCDC149Q6ZUS6 474 aa14.74□□□□□ -0.05
VPS26A-205ENST00000489656 TAC4Q86UU9 113 aa14.74□□□□□ -0.05
VPS26A-205ENST00000489656 MMGT1Q8N4V1 131 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms