RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 GP1BAP07359 652 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 ESRRAP11474 423 aaPredicted RBP2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 LIG1P18858 919 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 U2AF2P26368 475 aaKnown RBP eCLIP2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 OR1D2P34982 312 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 SOX18P35713 384 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 IFNAR2P48551 515 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 FNTBP49356 437 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 TAF6P49848 677 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 KPNA1P52294 538 aaPredicted RBP2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 GPLD1P80108 840 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 TSPY1Q01534 308 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 C19orf57Q0VDD7 668 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 MPP7Q5T2T1 576 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 RNF187Q5TA31 235 aaPredicted RBP2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 FOXB2Q5VYV0 432 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 LYSMD4Q5XG99 296 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 ARMCX5Q6P1M9 558 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 C1orf186Q6ZWK4 172 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 TAS1R1Q7RTX1 841 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 PDZD3Q86UT5 571 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 MICU3Q86XE3 530 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 C12orf76Q8N812 135 aaPredicted RBP2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 RBBP8NLQ8NC74 664 aaPredicted RBP2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 GOLGA5Q8TBA6 731 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 DYDC2Q96IM9 177 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 NLRP4Q96MN2 994 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 ZNF578Q96N58 590 aaPredicted RBP2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 PLA2G2FQ9BZM2 168 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 FOXQ1Q9C009 403 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 ADNPQ9H2P0 1102 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 MINDY3Q9H8M7 445 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 SGK2Q9HBY8 427 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 HPS4Q9NQG7 708 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 OLFML3Q9NRN5 406 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 CPSF3Q9UKF6 684 aaKnown RBP2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 TELO2Q9Y4R8 837 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 A0A1W2PQH9 124 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 MYMKA6NI61 221 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 INO80B-WBP1J3KQ70 363 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 TNFSF14O43557 240 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 CACNG3O60359 315 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 VNN2O95498 520 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 DLGAP3O95886 979 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 B3GALT4O96024 378 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 PRKCGP05129 697 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 MYL1P05976 194 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 DCNP07585 359 aaKnown RBP2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 TKTP29401 623 aaKnown RBP2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 ERVPABLB-1P60509 514 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 GOLGA8FQ08AF8 430 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 GOLGA8DPQ0D2H9 430 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 TWF1Q12792 350 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 IFRD2Q12894 506 aaPredicted RBP2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 TOB2Q14106 344 aaPredicted RBP2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 TRIM29Q14134 588 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 MPP2Q14168 576 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 MTF1Q14872 753 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 KRTAP21-3Q3LHN1 58 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 LRFN4Q6PJG9 635 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 Q6ZUG5 572 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 TOGARAM2Q6ZUX3 1019 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 HTR3DQ70Z44 454 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 UNC93AQ86WB7 457 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 BRSK2Q8IWQ3 736 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 HDDC3Q8N4P3 179 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 C4orf32Q8N8J7 132 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 KCTD13Q8WZ19 329 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 GTF3C6Q969F1 213 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 PPP1R14AQ96A00 147 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 PNKPQ96T60 521 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 LPIN3Q9BQK8 851 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 ELOVL4Q9GZR5 314 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 TDP1Q9NUW8 608 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 LARSQ9P2J5 1176 aaKnown RBP2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 FZD4Q9ULV1 537 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 DMTF1Q9Y222 760 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 CDY1Q9Y6F8 540 aa2.91□□□□□ -1.94
DEPDC1-203ENST00000488146 PIEZO1Q92508 2521 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 ANAPC1Q9H1A4 1944 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 PTPRJQ12913 1337 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 K7ERI5 159 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 RNF225M0QZC1 329 aaPredicted RBP2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 CDX4O14627 284 aaPredicted RBP2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 CPLX1O14810 134 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 PMM2O15305 246 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 CCL16O15467 120 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 SLC37A4O43826 429 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 DNAJC6O75061 913 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 SMNDC1O75940 238 aaKnown RBP eCLIP2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 HTR3BO95264 441 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 SEC24AO95486 1093 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 TDP2O95551 362 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 OAS1P00973 400 aaKnown RBP2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 POMCP01189 267 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 BMP4P12644 408 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 NCAM1P13591 858 aa2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 HMGA1P17096 107 aaKnown RBP2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 LONP1P36776 959 aaKnown RBP2.9□□□□□ -1.94
DEPDC1-203ENST00000488146 ADH7P40394 386 aa2.9□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms