RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 PPM1DO15297 605 aa4.38□□□□□ -1.71
HMGB1P36-201ENST00000487709 MOSPD3O75425 235 aa4.38□□□□□ -1.71
HMGB1P36-201ENST00000487709 ZFXP17010 805 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P36-201ENST00000487709 LIPAP38571 399 aa4.38□□□□□ -1.71
HMGB1P36-201ENST00000487709 GATMP50440 423 aa4.38□□□□□ -1.71
HMGB1P36-201ENST00000487709 ALDH18A1P54886 795 aaKnown RBP4.38□□□□□ -1.71
HMGB1P36-201ENST00000487709 KCNAB1Q14722 419 aa4.38□□□□□ -1.71
HMGB1P36-201ENST00000487709 CLCA4Q14CN2 919 aa4.38□□□□□ -1.71
HMGB1P36-201ENST00000487709 RAB30Q15771 203 aa4.38□□□□□ -1.71
HMGB1P36-201ENST00000487709 SLC5A9Q2M3M2 681 aa4.38□□□□□ -1.71
HMGB1P36-201ENST00000487709 ZNF66Q6ZN08 573 aa4.38□□□□□ -1.71
HMGB1P36-201ENST00000487709 ZNF551Q7Z340 670 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P36-201ENST00000487709 NEK8Q86SG6 692 aa4.38□□□□□ -1.71
HMGB1P36-201ENST00000487709 CCDC28AQ8IWP9 274 aa4.38□□□□□ -1.71
HMGB1P36-201ENST00000487709 MBD3L2Q8NHZ7 208 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P36-201ENST00000487709 XAGE5Q8WWM1 108 aa4.38□□□□□ -1.71
HMGB1P36-201ENST00000487709 GLG1Q92896 1179 aa4.38□□□□□ -1.71
HMGB1P36-201ENST00000487709 RSPRY1Q96DX4 576 aa4.38□□□□□ -1.71
HMGB1P36-201ENST00000487709 FAM227BQ96M60 508 aa4.38□□□□□ -1.71
HMGB1P36-201ENST00000487709 SH2D3AQ9BRG2 576 aa4.38□□□□□ -1.71
HMGB1P36-201ENST00000487709 HERPUD2Q9BSE4 406 aa4.38□□□□□ -1.71
HMGB1P36-201ENST00000487709 SNX15Q9NRS6 342 aa4.38□□□□□ -1.71
HMGB1P36-201ENST00000487709 VSX1Q9NZR4 365 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P36-201ENST00000487709 LRFN1Q9P244 771 aa4.38□□□□□ -1.71
HMGB1P36-201ENST00000487709 NKX1-2Q9UD57 310 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P36-201ENST00000487709 DRG1Q9Y295 367 aaKnown RBP4.38□□□□□ -1.71
HMGB1P36-201ENST00000487709 SSX2IPQ9Y2D8 614 aa4.38□□□□□ -1.71
HMGB1P36-201ENST00000487709 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P36-201ENST00000487709 VWC2LB2RUY7 222 aa4.37□□□□□ -1.71
HMGB1P36-201ENST00000487709 QSOX1O00391 747 aa4.37□□□□□ -1.71
HMGB1P36-201ENST00000487709 KCNQ3O43525 872 aa4.37□□□□□ -1.71
HMGB1P36-201ENST00000487709 NDST3O95803 873 aa4.37□□□□□ -1.71
HMGB1P36-201ENST00000487709 CSTBP04080 98 aaKnown RBP4.37□□□□□ -1.71
HMGB1P36-201ENST00000487709 CSF1RP07333 972 aa4.37□□□□□ -1.71
HMGB1P36-201ENST00000487709 SRGAP2BP0DMP2 458 aa4.37□□□□□ -1.71
HMGB1P36-201ENST00000487709 GABRB3P28472 473 aa4.37□□□□□ -1.71
HMGB1P36-201ENST00000487709 ADORA2AP29274 412 aa4.37□□□□□ -1.71
HMGB1P36-201ENST00000487709 TKTP29401 623 aaKnown RBP4.37□□□□□ -1.71
HMGB1P36-201ENST00000487709 UQCRC1P31930 480 aa4.37□□□□□ -1.71
HMGB1P36-201ENST00000487709 CCKBRP32239 447 aa4.37□□□□□ -1.71
HMGB1P36-201ENST00000487709 TBC1D25Q3MII6 688 aa4.37□□□□□ -1.71
HMGB1P36-201ENST00000487709 ZIK1Q3SY52 487 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P36-201ENST00000487709 ZACNQ401N2 412 aa4.37□□□□□ -1.71
HMGB1P36-201ENST00000487709 FAM83BQ5T0W9 1011 aa4.37□□□□□ -1.71
HMGB1P36-201ENST00000487709 TREML2Q5T2D2 321 aa4.37□□□□□ -1.71
HMGB1P36-201ENST00000487709 TMEM63BQ5T3F8 832 aa4.37□□□□□ -1.71
HMGB1P36-201ENST00000487709 MTHFD1LQ6UB35 978 aa4.37□□□□□ -1.71
HMGB1P36-201ENST00000487709 ZNF517Q6ZMY9 492 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P36-201ENST00000487709 WDR53Q7Z5U6 358 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P36-201ENST00000487709 KCTD20Q7Z5Y7 419 aa4.37□□□□□ -1.71
HMGB1P36-201ENST00000487709 CAND1Q86VP6 1230 aaKnown RBP4.37□□□□□ -1.71
HMGB1P36-201ENST00000487709 RASGRP3Q8IV61 690 aa4.37□□□□□ -1.71
HMGB1P36-201ENST00000487709 ANKRD42Q8N9B4 389 aa4.37□□□□□ -1.71
HMGB1P36-201ENST00000487709 RP9Q8TA86 221 aaKnown RBP4.37□□□□□ -1.71
HMGB1P36-201ENST00000487709 WDR60Q8WVS4 1066 aa4.37□□□□□ -1.71
HMGB1P36-201ENST00000487709 SOCS4Q8WXH5 440 aa4.37□□□□□ -1.71
HMGB1P36-201ENST00000487709 R3HDM4Q96D70 268 aa4.37□□□□□ -1.71
HMGB1P36-201ENST00000487709 RMDN3Q96TC7 470 aa4.37□□□□□ -1.71
HMGB1P36-201ENST00000487709 PRPF18Q99633 342 aaKnown RBP4.37□□□□□ -1.71
HMGB1P36-201ENST00000487709 C17orf80Q9BSJ5 609 aa4.37□□□□□ -1.71
HMGB1P36-201ENST00000487709 TMEM8AQ9HCN3 771 aa4.37□□□□□ -1.71
HMGB1P36-201ENST00000487709 SERGEFQ9UGK8 458 aa4.37□□□□□ -1.71
HMGB1P36-201ENST00000487709 ZNF580Q9UK33 172 aa4.37□□□□□ -1.71
HMGB1P36-201ENST00000487709 ZMYND8Q9ULU4 1186 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P36-201ENST00000487709 NFU1Q9UMS0 254 aa4.37□□□□□ -1.71
HMGB1P36-201ENST00000487709 SNX14Q9Y5W7 946 aa4.37□□□□□ -1.71
HMGB1P36-201ENST00000487709 SYT5O00445 386 aa4.36□□□□□ -1.71
HMGB1P36-201ENST00000487709 ZSCAN9O15535 394 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P36-201ENST00000487709 FESP07332 822 aa4.36□□□□□ -1.71
HMGB1P36-201ENST00000487709 HNRNPCP07910 306 aaKnown RBP eCLIP4.36□□□□□ -1.71
HMGB1P36-201ENST00000487709 RHOP08100 348 aa4.36□□□□□ -1.71
HMGB1P36-201ENST00000487709 ITGA2BP08514 1039 aa4.36□□□□□ -1.71
HMGB1P36-201ENST00000487709 NPSP0C0P6 89 aa4.36□□□□□ -1.71
HMGB1P36-201ENST00000487709 EBLN1P0CF75 366 aa4.36□□□□□ -1.71
HMGB1P36-201ENST00000487709 NR2F6P10588 404 aa4.36□□□□□ -1.71
HMGB1P36-201ENST00000487709 HGFP14210 728 aa4.36□□□□□ -1.71
HMGB1P36-201ENST00000487709 DRD4P21917 467 aa4.36□□□□□ -1.71
HMGB1P36-201ENST00000487709 MST1P26927 711 aa4.36□□□□□ -1.71
HMGB1P36-201ENST00000487709 CHKAP35790 457 aa4.36□□□□□ -1.71
HMGB1P36-201ENST00000487709 IL6STP40189 918 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P36-201ENST00000487709 GRK6P43250 576 aa4.36□□□□□ -1.71
HMGB1P36-201ENST00000487709 PPM1FP49593 454 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P36-201ENST00000487709 CLCN2P51788 898 aa4.36□□□□□ -1.71
HMGB1P36-201ENST00000487709 DGKQP52824 942 aa4.36□□□□□ -1.71
HMGB1P36-201ENST00000487709 TIAL1Q01085 375 aaKnown RBP eCLIP4.36□□□□□ -1.71
HMGB1P36-201ENST00000487709 P3H1Q32P28 736 aa4.36□□□□□ -1.71
HMGB1P36-201ENST00000487709 SUPT20HL1Q3ZLR7 823 aa4.36□□□□□ -1.71
HMGB1P36-201ENST00000487709 MANEALQ5VSG8 457 aa4.36□□□□□ -1.71
HMGB1P36-201ENST00000487709 AWAT2Q6E213 333 aa4.36□□□□□ -1.71
HMGB1P36-201ENST00000487709 GGT6Q6P531 493 aa4.36□□□□□ -1.71
HMGB1P36-201ENST00000487709 TLDC1Q6P9B6 456 aa4.36□□□□□ -1.71
HMGB1P36-201ENST00000487709 SLC2A7Q6PXP3 512 aa4.36□□□□□ -1.71
HMGB1P36-201ENST00000487709 SKAP1Q86WV1 359 aa4.36□□□□□ -1.71
HMGB1P36-201ENST00000487709 SIRT6Q8N6T7 355 aa4.36□□□□□ -1.71
HMGB1P36-201ENST00000487709 GLIS1Q8NBF1 620 aa4.36□□□□□ -1.71
HMGB1P36-201ENST00000487709 ADGRE3Q9BY15 652 aa4.36□□□□□ -1.71
HMGB1P36-201ENST00000487709 SEMA4CQ9C0C4 833 aa4.36□□□□□ -1.71
HMGB1P36-201ENST00000487709 MYLK2Q9H1R3 596 aa4.36□□□□□ -1.71
HMGB1P36-201ENST00000487709 PPCSQ9HAB8 311 aa4.36□□□□□ -1.71
HMGB1P36-201ENST00000487709 ARHGEF3Q9NR81 526 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms