RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 CDH8P55286 799 aa12.95□□□□□ -0.34
ATPAF1-205ENST00000487193 DAB2P98082 770 aa12.95□□□□□ -0.34
ATPAF1-205ENST00000487193 GRIN1Q05586 938 aa12.95□□□□□ -0.34
ATPAF1-205ENST00000487193 IFRD2Q12894 506 aaPredicted RBP12.95□□□□□ -0.34
ATPAF1-205ENST00000487193 TBR1Q16650 682 aa12.95□□□□□ -0.34
ATPAF1-205ENST00000487193 PROX2Q3B8N5 592 aa12.95□□□□□ -0.34
ATPAF1-205ENST00000487193 PDCL2Q8N4E4 241 aa12.95□□□□□ -0.34
ATPAF1-205ENST00000487193 BICD1Q96G01 975 aa12.95□□□□□ -0.34
ATPAF1-205ENST00000487193 SPATA17Q96L03 361 aa12.95□□□□□ -0.34
ATPAF1-205ENST00000487193 PKMYT1Q99640 499 aa12.95□□□□□ -0.34
ATPAF1-205ENST00000487193 ESYT1Q9BSJ8 1104 aa12.95□□□□□ -0.34
ATPAF1-205ENST00000487193 BTBD1Q9H0C5 482 aa12.95□□□□□ -0.34
ATPAF1-205ENST00000487193 GDF3Q9NR23 364 aa12.95□□□□□ -0.34
ATPAF1-205ENST00000487193 AASDHPPTQ9NRN7 309 aa12.95□□□□□ -0.34
ATPAF1-205ENST00000487193 GJB4Q9NTQ9 266 aa12.95□□□□□ -0.34
ATPAF1-205ENST00000487193 DPP3Q9NY33 737 aa12.95□□□□□ -0.34
ATPAF1-205ENST00000487193 MAGEC2Q9UBF1 373 aaPredicted RBP12.95□□□□□ -0.34
ATPAF1-205ENST00000487193 PLAAQ9Y263 795 aa12.95□□□□□ -0.34
ATPAF1-205ENST00000487193 ZFC3H1O60293 1989 aaKnown RBP12.94□□□□□ -0.34
ATPAF1-205ENST00000487193 A0A1W2PNU3 283 aaPredicted RBP12.94□□□□□ -0.34
ATPAF1-205ENST00000487193 FAM47DPA6NHR8 397 aa12.94□□□□□ -0.34
ATPAF1-205ENST00000487193 TULP1O00294 542 aaPredicted RBP12.94□□□□□ -0.34
ATPAF1-205ENST00000487193 YKT6O15498 198 aa12.94□□□□□ -0.34
ATPAF1-205ENST00000487193 CYP26A1O43174 497 aa12.94□□□□□ -0.34
ATPAF1-205ENST00000487193 SIGLEC6O43699 453 aa12.94□□□□□ -0.34
ATPAF1-205ENST00000487193 NEMFO60524 1076 aa12.94□□□□□ -0.34
ATPAF1-205ENST00000487193 EPHX1P07099 455 aa12.94□□□□□ -0.34
ATPAF1-205ENST00000487193 HMGB1P09429 215 aaKnown RBP12.94□□□□□ -0.34
ATPAF1-205ENST00000487193 BDNFP23560 247 aa12.94□□□□□ -0.34
ATPAF1-205ENST00000487193 PPP3CCP48454 512 aa12.94□□□□□ -0.34
ATPAF1-205ENST00000487193 ZNF132P52740 706 aa12.94□□□□□ -0.34
ATPAF1-205ENST00000487193 TAF10Q12962 218 aa12.94□□□□□ -0.34
ATPAF1-205ENST00000487193 SRSF6Q13247 344 aaKnown RBP12.94□□□□□ -0.34
ATPAF1-205ENST00000487193 CFAP221Q4G0U5 840 aa12.94□□□□□ -0.34
ATPAF1-205ENST00000487193 DAW1Q8N136 415 aa12.94□□□□□ -0.34
ATPAF1-205ENST00000487193 ZNF564Q8TBZ8 553 aaPredicted RBP12.94□□□□□ -0.34
ATPAF1-205ENST00000487193 TSPAN18Q96SJ8 248 aa12.94□□□□□ -0.34
ATPAF1-205ENST00000487193 LHX5Q9H2C1 402 aa12.94□□□□□ -0.34
ATPAF1-205ENST00000487193 PLK2Q9NYY3 685 aa12.94□□□□□ -0.34
ATPAF1-205ENST00000487193 WDR35Q9P2L0 1181 aa12.94□□□□□ -0.34
ATPAF1-205ENST00000487193 THAP10Q9P2Z0 257 aaPredicted RBP12.94□□□□□ -0.34
ATPAF1-205ENST00000487193 PTPRJQ12913 1337 aa12.93□□□□□ -0.34
ATPAF1-205ENST00000487193 A1L4Q6 167 aa12.93□□□□□ -0.34
ATPAF1-205ENST00000487193 TRIM38O00635 465 aa12.93□□□□□ -0.34
ATPAF1-205ENST00000487193 COCHO43405 550 aa12.93□□□□□ -0.34
ATPAF1-205ENST00000487193 ATP2C2O75185 946 aa12.93□□□□□ -0.34
ATPAF1-205ENST00000487193 ANXA13P27216 316 aa12.93□□□□□ -0.34
ATPAF1-205ENST00000487193 COL8A1P27658 744 aa12.93□□□□□ -0.34
ATPAF1-205ENST00000487193 RPA1P27694 616 aa12.93□□□□□ -0.34
ATPAF1-205ENST00000487193 ASIC1P78348 528 aa12.93□□□□□ -0.34
ATPAF1-205ENST00000487193 CLCA4Q14CN2 919 aa12.93□□□□□ -0.34
ATPAF1-205ENST00000487193 ECM1Q16610 540 aa12.93□□□□□ -0.34
ATPAF1-205ENST00000487193 SV2CQ496J9 727 aa12.93□□□□□ -0.34
ATPAF1-205ENST00000487193 SFMBT2Q5VUG0 894 aa12.93□□□□□ -0.34
ATPAF1-205ENST00000487193 ZPBP2Q6X784 338 aa12.93□□□□□ -0.34
ATPAF1-205ENST00000487193 TMC6Q7Z403 805 aa12.93□□□□□ -0.34
ATPAF1-205ENST00000487193 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.93□□□□□ -0.34
ATPAF1-205ENST00000487193 CCSER1Q9C0I3 900 aa12.93□□□□□ -0.34
ATPAF1-205ENST00000487193 GZF1Q9H116 711 aaPredicted RBP12.93□□□□□ -0.34
ATPAF1-205ENST00000487193 ABCG4Q9H172 646 aa12.93□□□□□ -0.34
ATPAF1-205ENST00000487193 TMPRSS4Q9NRS4 437 aa12.93□□□□□ -0.34
ATPAF1-205ENST00000487193 GEMIN8Q9NWZ8 242 aaKnown RBP12.93□□□□□ -0.34
ATPAF1-205ENST00000487193 ATXN7L1Q9ULK2 861 aaPredicted RBP12.93□□□□□ -0.34
ATPAF1-205ENST00000487193 L1RE1Q9UN81 338 aa12.93□□□□□ -0.34
ATPAF1-205ENST00000487193 SPTBN1Q01082 2364 aaKnown RBP12.93□□□□□ -0.34
ATPAF1-205ENST00000487193 ARID1BQ8NFD5 2236 aaPredicted RBP12.92□□□□□ -0.34
ATPAF1-205ENST00000487193 TLN1Q9Y490 2541 aaKnown RBP12.92□□□□□ -0.34
ATPAF1-205ENST00000487193 PMS2P1A4D2B8 440 aa12.92□□□□□ -0.34
ATPAF1-205ENST00000487193 WNT7AO00755 349 aa12.92□□□□□ -0.34
ATPAF1-205ENST00000487193 CPLX1O14810 134 aa12.92□□□□□ -0.34
ATPAF1-205ENST00000487193 WNT9AO14904 365 aa12.92□□□□□ -0.34
ATPAF1-205ENST00000487193 SDC3O75056 442 aa12.92□□□□□ -0.34
ATPAF1-205ENST00000487193 AGFG2O95081 481 aa12.92□□□□□ -0.34
ATPAF1-205ENST00000487193 IGHV4-34P06331 123 aa12.92□□□□□ -0.34
ATPAF1-205ENST00000487193 CENPBP07199 599 aaPredicted RBP12.92□□□□□ -0.34
ATPAF1-205ENST00000487193 ADRB2P07550 413 aa12.92□□□□□ -0.34
ATPAF1-205ENST00000487193 PRKCHP24723 683 aa12.92□□□□□ -0.34
ATPAF1-205ENST00000487193 CD38P28907 300 aa12.92□□□□□ -0.34
ATPAF1-205ENST00000487193 CASRP41180 1078 aa12.92□□□□□ -0.34
ATPAF1-205ENST00000487193 MAGEA11P43364 429 aa12.92□□□□□ -0.34
ATPAF1-205ENST00000487193 DUSP3P51452 185 aaPredicted RBP12.92□□□□□ -0.34
ATPAF1-205ENST00000487193 NR5A1Q13285 461 aa12.92□□□□□ -0.34
ATPAF1-205ENST00000487193 KRT32Q14532 448 aa12.92□□□□□ -0.34
ATPAF1-205ENST00000487193 TDRD10Q5VZ19 366 aaKnown RBP12.92□□□□□ -0.34
ATPAF1-205ENST00000487193 IGF2-ASQ6U949 168 aa12.92□□□□□ -0.34
ATPAF1-205ENST00000487193 KANSL1Q7Z3B3 1105 aa12.92□□□□□ -0.34
ATPAF1-205ENST00000487193 OSTM1Q86WC4 334 aa12.92□□□□□ -0.34
ATPAF1-205ENST00000487193 ERMNQ8TAM6 284 aa12.92□□□□□ -0.34
ATPAF1-205ENST00000487193 ATXN7L3BQ96GX2 97 aa12.92□□□□□ -0.34
ATPAF1-205ENST00000487193 PRR11Q96HE9 360 aaPredicted RBP12.92□□□□□ -0.34
ATPAF1-205ENST00000487193 FUBP3Q96I24 572 aaKnown RBP eCLIP12.92□□□□□ -0.34
ATPAF1-205ENST00000487193 TTLL2Q9BWV7 592 aa12.92□□□□□ -0.34
ATPAF1-205ENST00000487193 EBF2Q9HAK2 575 aa12.92□□□□□ -0.34
ATPAF1-205ENST00000487193 EHD2Q9NZN4 543 aa12.92□□□□□ -0.34
ATPAF1-205ENST00000487193 A0A1W2PPC4 97 aa12.91□□□□□ -0.34
ATPAF1-205ENST00000487193 CDRT15L2A8MXV6 281 aa12.91□□□□□ -0.34
ATPAF1-205ENST00000487193 OGTO15294 1046 aa12.91□□□□□ -0.34
ATPAF1-205ENST00000487193 HUS1O60921 280 aa12.91□□□□□ -0.34
ATPAF1-205ENST00000487193 DTNBO60941 627 aa12.91□□□□□ -0.34
ATPAF1-205ENST00000487193 ACO1P21399 889 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms