RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 CHD1LQ86WJ1 897 aa7.22□□□□□ -1.25
SMC4-217ENST00000485867 TMC8Q8IU68 726 aa7.22□□□□□ -1.25
SMC4-217ENST00000485867 ARID3BQ8IVW6 561 aaPredicted RBP7.22□□□□□ -1.25
SMC4-217ENST00000485867 SMC5Q8IY18 1101 aa7.22□□□□□ -1.25
SMC4-217ENST00000485867 LILRA2Q8N149 483 aa7.22□□□□□ -1.25
SMC4-217ENST00000485867 OXR1Q8N573 874 aa7.22□□□□□ -1.25
SMC4-217ENST00000485867 ETNPPLQ8TBG4 499 aa7.22□□□□□ -1.25
SMC4-217ENST00000485867 RUFY2Q8WXA3 655 aa7.22□□□□□ -1.25
SMC4-217ENST00000485867 PIGKQ92643 395 aa7.22□□□□□ -1.25
SMC4-217ENST00000485867 CHFRQ96EP1 664 aa7.22□□□□□ -1.25
SMC4-217ENST00000485867 CCDC74BQ96LY2 380 aa7.22□□□□□ -1.25
SMC4-217ENST00000485867 ZNF512Q96ME7 567 aaPredicted RBP7.22□□□□□ -1.25
SMC4-217ENST00000485867 LRRC3Q9BY71 257 aa7.22□□□□□ -1.25
SMC4-217ENST00000485867 XPNPEP1Q9NQW7 623 aa7.22□□□□□ -1.25
SMC4-217ENST00000485867 EBF1Q9UH73 591 aa7.22□□□□□ -1.25
SMC4-217ENST00000485867 KLHL3Q9UH77 587 aa7.22□□□□□ -1.25
SMC4-217ENST00000485867 INVSQ9Y283 1065 aa7.22□□□□□ -1.25
SMC4-217ENST00000485867 RBM8AQ9Y5S9 174 aaKnown RBP7.22□□□□□ -1.25
SMC4-217ENST00000485867 HELZP42694 1942 aaKnown RBP7.22□□□□□ -1.25
SMC4-217ENST00000485867 FITM1A5D6W6 292 aa7.21□□□□□ -1.26
SMC4-217ENST00000485867 TRDMT1O14717 391 aaKnown RBP7.21□□□□□ -1.26
SMC4-217ENST00000485867 TBX3O15119 743 aa7.21□□□□□ -1.26
SMC4-217ENST00000485867 ZBTB43O43298 467 aa7.21□□□□□ -1.26
SMC4-217ENST00000485867 TRAPPC3O43617 180 aa7.21□□□□□ -1.26
SMC4-217ENST00000485867 PRAMEF12O95522 483 aa7.21□□□□□ -1.26
SMC4-217ENST00000485867 TDP2O95551 362 aa7.21□□□□□ -1.26
SMC4-217ENST00000485867 EGFP01133 1207 aa7.21□□□□□ -1.26
SMC4-217ENST00000485867 ENGP17813 658 aa7.21□□□□□ -1.26
SMC4-217ENST00000485867 GARTP22102 1010 aa7.21□□□□□ -1.26
SMC4-217ENST00000485867 CHMLP26374 656 aa7.21□□□□□ -1.26
SMC4-217ENST00000485867 GNA11P29992 359 aa7.21□□□□□ -1.26
SMC4-217ENST00000485867 CLCNKBP51801 687 aa7.21□□□□□ -1.26
SMC4-217ENST00000485867 DGKEP52429 567 aa7.21□□□□□ -1.26
SMC4-217ENST00000485867 ARPP19P56211 112 aa7.21□□□□□ -1.26
SMC4-217ENST00000485867 TAGLNQ01995 201 aaKnown RBP7.21□□□□□ -1.26
SMC4-217ENST00000485867 FAM160A1Q05DH4 1040 aa7.21□□□□□ -1.26
SMC4-217ENST00000485867 MPP2Q14168 576 aa7.21□□□□□ -1.26
SMC4-217ENST00000485867 TFDP1Q14186 410 aa7.21□□□□□ -1.26
SMC4-217ENST00000485867 DMC1Q14565 340 aa7.21□□□□□ -1.26
SMC4-217ENST00000485867 Q4G0T1 1027 aa7.21□□□□□ -1.26
SMC4-217ENST00000485867 TPGS2Q68CL5 300 aa7.21□□□□□ -1.26
SMC4-217ENST00000485867 SYT13Q7L8C5 426 aa7.21□□□□□ -1.26
SMC4-217ENST00000485867 RELL1Q8IUW5 271 aa7.21□□□□□ -1.26
SMC4-217ENST00000485867 CCDC12Q8WUD4 166 aaPredicted RBP7.21□□□□□ -1.26
SMC4-217ENST00000485867 ADAMTS14Q8WXS8 1223 aa7.21□□□□□ -1.26
SMC4-217ENST00000485867 NUSAP1Q9BXS6 441 aaKnown RBP7.21□□□□□ -1.26
SMC4-217ENST00000485867 NFKBIZQ9BYH8 718 aa7.21□□□□□ -1.26
SMC4-217ENST00000485867 OBP2AQ9NY56 170 aa7.21□□□□□ -1.26
SMC4-217ENST00000485867 FBXL5Q9UKA1 691 aa7.21□□□□□ -1.26
SMC4-217ENST00000485867 RAI2Q9Y5P3 530 aa7.21□□□□□ -1.26
SMC4-217ENST00000485867 GOLGA8AA7E2F4 631 aa7.2□□□□□ -1.26
SMC4-217ENST00000485867 GOLGA8BA8MQT2 603 aa7.2□□□□□ -1.26
SMC4-217ENST00000485867 SGSM2O43147 1006 aa7.2□□□□□ -1.26
SMC4-217ENST00000485867 DKC1O60832 514 aaKnown RBP eCLIP7.2□□□□□ -1.26
SMC4-217ENST00000485867 GSPT1P15170 499 aaKnown RBP7.2□□□□□ -1.26
SMC4-217ENST00000485867 GLRA2P23416 452 aa7.2□□□□□ -1.26
SMC4-217ENST00000485867 YWHABP31946 246 aaKnown RBP7.2□□□□□ -1.26
SMC4-217ENST00000485867 DHPSP49366 369 aaPredicted RBP7.2□□□□□ -1.26
SMC4-217ENST00000485867 MCM2P49736 904 aa7.2□□□□□ -1.26
SMC4-217ENST00000485867 TEKQ02763 1124 aa7.2□□□□□ -1.26
SMC4-217ENST00000485867 NUCB1Q02818 461 aa7.2□□□□□ -1.26
SMC4-217ENST00000485867 PPP2R5CQ13362 524 aa7.2□□□□□ -1.26
SMC4-217ENST00000485867 PWP1Q13610 501 aa7.2□□□□□ -1.26
SMC4-217ENST00000485867 MRPL58Q14197 206 aaKnown RBP7.2□□□□□ -1.26
SMC4-217ENST00000485867 UPP1Q16831 310 aa7.2□□□□□ -1.26
SMC4-217ENST00000485867 XKR9Q5GH70 373 aa7.2□□□□□ -1.26
SMC4-217ENST00000485867 GLRA4Q5JXX5 417 aa7.2□□□□□ -1.26
SMC4-217ENST00000485867 REC114Q7Z4M0 266 aa7.2□□□□□ -1.26
SMC4-217ENST00000485867 IRF2BP1Q8IU81 584 aa7.2□□□□□ -1.26
SMC4-217ENST00000485867 C4orf19Q8IY42 314 aa7.2□□□□□ -1.26
SMC4-217ENST00000485867 GOLM1Q8NBJ4 401 aa7.2□□□□□ -1.26
SMC4-217ENST00000485867 DAGLBQ8NCG7 672 aa7.2□□□□□ -1.26
SMC4-217ENST00000485867 RPLP0P6Q8NHW5 317 aa7.2□□□□□ -1.26
SMC4-217ENST00000485867 FBXO27Q8NI29 283 aa7.2□□□□□ -1.26
SMC4-217ENST00000485867 BICD2Q8TD16 824 aa7.2□□□□□ -1.26
SMC4-217ENST00000485867 BPIFB1Q8TDL5 484 aa7.2□□□□□ -1.26
SMC4-217ENST00000485867 PPP1R10Q96QC0 940 aaKnown RBP7.2□□□□□ -1.26
SMC4-217ENST00000485867 LXNQ9BS40 222 aa7.2□□□□□ -1.26
SMC4-217ENST00000485867 TPSD1Q9BZJ3 242 aa7.2□□□□□ -1.26
SMC4-217ENST00000485867 FBRSL1Q9HCM7 1045 aaKnown RBP7.2□□□□□ -1.26
SMC4-217ENST00000485867 HPS4Q9NQG7 708 aa7.2□□□□□ -1.26
SMC4-217ENST00000485867 DKK4Q9UBT3 224 aa7.2□□□□□ -1.26
SMC4-217ENST00000485867 AFF4Q9UHB7 1163 aaKnown RBP7.2□□□□□ -1.26
SMC4-217ENST00000485867 MBD1Q9UIS9 605 aaPredicted RBP7.2□□□□□ -1.26
SMC4-217ENST00000485867 TPCN1Q9ULQ1 816 aa7.2□□□□□ -1.26
SMC4-217ENST00000485867 ZNF281Q9Y2X9 895 aa7.2□□□□□ -1.26
SMC4-217ENST00000485867 YIPF1Q9Y548 306 aa7.2□□□□□ -1.26
SMC4-217ENST00000485867 USP9XQ93008 2570 aaPredicted RBP7.2□□□□□ -1.26
SMC4-217ENST00000485867 CABIN1Q9Y6J0 2220 aa7.2□□□□□ -1.26
SMC4-217ENST00000485867 KNL1Q8NG31 2342 aa7.19□□□□□ -1.26
SMC4-217ENST00000485867 ANK1P16157 1881 aa7.19□□□□□ -1.26
SMC4-217ENST00000485867 MUC22E2RYF6 1773 aaPredicted RBP7.19□□□□□ -1.26
SMC4-217ENST00000485867 A0A087WV48 116 aa7.19□□□□□ -1.26
SMC4-217ENST00000485867 CYP3A7-CYP3A51PA0A087WV96 503 aa7.19□□□□□ -1.26
SMC4-217ENST00000485867 TCAF2A6NFQ2 919 aa7.19□□□□□ -1.26
SMC4-217ENST00000485867 OTOL1A6NHN0 477 aaPredicted RBP7.19□□□□□ -1.26
SMC4-217ENST00000485867 H7C4K7 107 aa7.19□□□□□ -1.26
SMC4-217ENST00000485867 SYN3O14994 580 aa7.19□□□□□ -1.26
SMC4-217ENST00000485867 VNN2O95498 520 aa7.19□□□□□ -1.26
SMC4-217ENST00000485867 FTH1P19P0C7X4 201 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms