RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 CLUHP3Q96NS8 147 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 TTPALQ9BTX7 342 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 CAPS2Q9BXY5 557 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 MRPL4Q9BYD3 311 aaKnown RBP4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 JMJD4Q9H9V9 463 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 VPS45Q9NRW7 570 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 HAUS2Q9NVX0 235 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 IL20Q9NYY1 176 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 ORC3Q9UBD5 711 aaPredicted RBP4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 RBPJLQ9UBG7 517 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 DENND2AQ9ULE3 1009 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 DNM3Q9UQ16 869 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 COA3Q9Y2R0 106 aaPredicted RBP4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 AP1M2Q9Y6Q5 423 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 V9GYY5 206 aaPredicted RBP4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 X6R8D5 127 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 PHLPP2Q6ZVD8 1323 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 RIC1Q4ADV7 1423 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 COL5A2P05997 1499 aaPredicted RBP4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 LRP6O75581 1613 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 NWD2Q9ULI1 1742 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 A0A0B4J269 797 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 A0A0G2JPF8 293 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 KLF18A0A0U1RQI7 1052 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 GOLGA6L9A6NEM1 432 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 HNRNPCL3B7ZW38 293 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 DDX3XO00571 662 aaKnown RBP eCLIP4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 NEMP1O14524 444 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 ZNF213O14771 459 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 PRODHO43272 600 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 GPAA1O43292 621 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 AP1G1O43747 822 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 ADCY3O60266 1144 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 CUTAO60888 179 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 NOL3O60936 208 aaKnown RBP4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 RTN2O75298 545 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 SLU7O95391 586 aaKnown RBP4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 OPN1MWP04001 364 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 CHGBP05060 677 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 HNRNPCL4P0DMR1 293 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 OPN1MW2P0DN77 364 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 OPN1MW3P0DN78 364 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 PCP11498 1178 aaKnown RBP4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 SCG2P13521 617 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 ATP1A3P13637 1013 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 H2AFXP16104 143 aaPredicted RBP4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 GAP43P17677 238 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 TFEBP19484 476 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 TACR2P21452 398 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 RPL13P26373 211 aaKnown RBP4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 CNTFP26441 200 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 ALDH1B1P30837 517 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 IL6STP40189 918 aaPredicted RBP4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 ME1P48163 572 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 ETV1P50549 477 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 ALDH3A2P51648 485 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 TKTL1P51854 596 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 ITGA1P56199 1179 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 TRAF1Q13077 416 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 ADAM15Q13444 863 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 PCBP1Q15365 356 aaKnown RBP eCLIP4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 NTRK3Q16288 839 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 CR1LQ2VPA4 569 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 ARL13BQ3SXY8 428 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 CEP55Q53EZ4 464 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 CCDC178Q5BJE1 867 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 DCAF17Q5H9S7 520 aaPredicted RBP4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 RESP18Q5W5W9 173 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 MCTP2Q6DN12 878 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 LIN54Q6MZP7 749 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 PGBD2Q6P3X8 592 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 SHQ1Q6PI26 577 aaKnown RBP4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 KCNT2Q6UVM3 1135 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 OLFM4Q6UX06 510 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 SEPT14Q6ZU15 432 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 MIB1Q86YT6 1006 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 RIOX2Q8IUF8 465 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 CCDC13Q8IYE1 715 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 AOPEPQ8N6M6 819 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 DENND6BQ8NEG7 585 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 ZMIZ2Q8NF64 920 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 TRAPPC12Q8WVT3 735 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 SHC3Q92529 594 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 RUBCNQ92622 972 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 DVL3Q92997 716 aaPredicted RBP4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 LRRC45Q96CN5 670 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 CCDC140Q96MF4 163 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 RUNDC3BQ96NL0 473 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 YME1L1Q96TA2 773 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 HERC2P3Q9BVR0 1158 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 LRRC2Q9BYS8 371 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 FTOQ9C0B1 505 aaKnown RBP eCLIP4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 HSD3B7Q9H2F3 369 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 CDIP1Q9H305 208 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 SLITRK6Q9H5Y7 841 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 ITM2CQ9NQX7 267 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 MCM9Q9NXL9 1143 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 TBC1D14Q9P2M4 693 aa4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 CHORDC1Q9UHD1 332 aaPredicted RBP4.27□□□□□ -1.73
PRPF38B-205ENST00000485810 HOOK1Q9UJC3 728 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms