RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 FASTKD1Q53R41 847 aaKnown RBP20.46■□□□□ 0.87
RPUSD3-216ENST00000484134 LGSNQ5TDP6 509 aa20.46■□□□□ 0.87
RPUSD3-216ENST00000484134 SLFN12LQ6IEE8 588 aa20.46■□□□□ 0.87
RPUSD3-216ENST00000484134 HPS6Q86YV9 775 aa20.46■□□□□ 0.87
RPUSD3-216ENST00000484134 RAB3IL1Q8TBN0 382 aa20.46■□□□□ 0.87
RPUSD3-216ENST00000484134 FNIP1Q8TF40 1166 aa20.46■□□□□ 0.87
RPUSD3-216ENST00000484134 HIC2Q96JB3 615 aa20.46■□□□□ 0.87
RPUSD3-216ENST00000484134 ZNF70Q9UC06 446 aaPredicted RBP20.46■□□□□ 0.87
RPUSD3-216ENST00000484134 USP18Q9UMW8 372 aa20.46■□□□□ 0.87
RPUSD3-216ENST00000484134 SORCS3Q9UPU3 1222 aa20.46■□□□□ 0.87
RPUSD3-216ENST00000484134 POMPQ9Y244 141 aa20.46■□□□□ 0.87
RPUSD3-216ENST00000484134 COL11A2P13942 1736 aaPredicted RBP20.45■□□□□ 0.87
RPUSD3-216ENST00000484134 KIAA1217Q5T5P2 1943 aa20.45■□□□□ 0.86
RPUSD3-216ENST00000484134 H3BNX3 289 aa20.45■□□□□ 0.86
RPUSD3-216ENST00000484134 TXNDC9O14530 226 aa20.45■□□□□ 0.86
RPUSD3-216ENST00000484134 TRDMT1O14717 391 aaKnown RBP20.45■□□□□ 0.86
RPUSD3-216ENST00000484134 MAP3K6O95382 1288 aa20.45■□□□□ 0.86
RPUSD3-216ENST00000484134 PENKP01210 267 aaPredicted RBP20.45■□□□□ 0.86
RPUSD3-216ENST00000484134 ERBB2P04626 1255 aa20.45■□□□□ 0.86
RPUSD3-216ENST00000484134 ATP5BP06576 529 aaKnown RBP20.45■□□□□ 0.86
RPUSD3-216ENST00000484134 RAG1P15918 1043 aa20.45■□□□□ 0.86
RPUSD3-216ENST00000484134 CHN2P52757 468 aa20.45■□□□□ 0.86
RPUSD3-216ENST00000484134 TCHHL1Q5QJ38 904 aaPredicted RBP20.45■□□□□ 0.86
RPUSD3-216ENST00000484134 SDCCAG8Q86SQ7 713 aaPredicted RBP20.45■□□□□ 0.86
RPUSD3-216ENST00000484134 RSPH3Q86UC2 560 aa20.45■□□□□ 0.86
RPUSD3-216ENST00000484134 VSIG10LQ86VR7 867 aa20.45■□□□□ 0.86
RPUSD3-216ENST00000484134 XYLT1Q86Y38 959 aa20.45■□□□□ 0.86
RPUSD3-216ENST00000484134 MPP5Q8N3R9 675 aa20.45■□□□□ 0.86
RPUSD3-216ENST00000484134 MPP4Q96JB8 637 aa20.45■□□□□ 0.86
RPUSD3-216ENST00000484134 NIF3L1Q9GZT8 377 aa20.45■□□□□ 0.86
RPUSD3-216ENST00000484134 PCDHGB4Q9UN71 923 aa20.45■□□□□ 0.86
RPUSD3-216ENST00000484134 PCDHGB5Q9Y5G0 923 aa20.45■□□□□ 0.86
RPUSD3-216ENST00000484134 LDHAP00338 332 aaKnown RBP20.45■□□□□ 0.86
RPUSD3-216ENST00000484134 ASLP04424 464 aa20.45■□□□□ 0.86
RPUSD3-216ENST00000484134 OSBPP22059 807 aa20.45■□□□□ 0.86
RPUSD3-216ENST00000484134 COPAP53621 1224 aa20.45■□□□□ 0.86
RPUSD3-216ENST00000484134 RPL10AP62906 217 aaKnown RBP20.45■□□□□ 0.86
RPUSD3-216ENST00000484134 FOLH1Q04609 750 aa20.45■□□□□ 0.86
RPUSD3-216ENST00000484134 CBLBQ13191 982 aa20.45■□□□□ 0.86
RPUSD3-216ENST00000484134 ORC1Q13415 861 aa20.45■□□□□ 0.86
RPUSD3-216ENST00000484134 ANKRD20A4Q4UJ75 823 aa20.45■□□□□ 0.86
RPUSD3-216ENST00000484134 MBLAC2Q68D91 279 aa20.45■□□□□ 0.86
RPUSD3-216ENST00000484134 CYP4V2Q6ZWL3 525 aaPredicted RBP20.45■□□□□ 0.86
RPUSD3-216ENST00000484134 PIWIL2Q8TC59 973 aaKnown RBP20.45■□□□□ 0.86
RPUSD3-216ENST00000484134 ACTRT2Q8TDY3 377 aa20.45■□□□□ 0.86
RPUSD3-216ENST00000484134 TMOD2Q9NZR1 351 aa20.45■□□□□ 0.86
RPUSD3-216ENST00000484134 EMCNQ9ULC0 261 aa20.45■□□□□ 0.86
RPUSD3-216ENST00000484134 YDJCA8MPS7 323 aa20.44■□□□□ 0.86
RPUSD3-216ENST00000484134 VILLO15195 856 aa20.44■□□□□ 0.86
RPUSD3-216ENST00000484134 KCNN4O15554 427 aa20.44■□□□□ 0.86
RPUSD3-216ENST00000484134 KRT38O76015 456 aa20.44■□□□□ 0.86
RPUSD3-216ENST00000484134 PSAPP07602 524 aa20.44■□□□□ 0.86
RPUSD3-216ENST00000484134 APRTP07741 180 aa20.44■□□□□ 0.86
RPUSD3-216ENST00000484134 FGF3P11487 239 aaPredicted RBP20.44■□□□□ 0.86
RPUSD3-216ENST00000484134 ARRB2P32121 409 aa20.44■□□□□ 0.86
RPUSD3-216ENST00000484134 DEPTORQ8TB45 409 aa20.44■□□□□ 0.86
RPUSD3-216ENST00000484134 JDP2Q8WYK2 163 aa20.44■□□□□ 0.86
RPUSD3-216ENST00000484134 DNAJC1Q96KC8 554 aaKnown RBP20.44■□□□□ 0.86
RPUSD3-216ENST00000484134 MIS12Q9H081 205 aa20.44■□□□□ 0.86
RPUSD3-216ENST00000484134 RSAD1Q9HA92 442 aa20.44■□□□□ 0.86
RPUSD3-216ENST00000484134 ZMPSTE24O75844 475 aa20.44■□□□□ 0.86
RPUSD3-216ENST00000484134 CD19P15391 556 aa20.44■□□□□ 0.86
RPUSD3-216ENST00000484134 KCNA4P22459 653 aa20.44■□□□□ 0.86
RPUSD3-216ENST00000484134 SERPINB6P35237 376 aa20.44■□□□□ 0.86
RPUSD3-216ENST00000484134 CDH6P55285 790 aa20.44■□□□□ 0.86
RPUSD3-216ENST00000484134 TLR1Q15399 786 aa20.44■□□□□ 0.86
RPUSD3-216ENST00000484134 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.44■□□□□ 0.86
RPUSD3-216ENST00000484134 ARCQ7LC44 396 aa20.44■□□□□ 0.86
RPUSD3-216ENST00000484134 NCAPG2Q86XI2 1143 aa20.44■□□□□ 0.86
RPUSD3-216ENST00000484134 TTLL6Q8N841 843 aa20.44■□□□□ 0.86
RPUSD3-216ENST00000484134 TFB1MQ8WVM0 346 aaKnown RBP20.44■□□□□ 0.86
RPUSD3-216ENST00000484134 GCNAQ96QF7 691 aa20.44■□□□□ 0.86
RPUSD3-216ENST00000484134 PNPOQ9NVS9 261 aa20.44■□□□□ 0.86
RPUSD3-216ENST00000484134 SF3B1O75533 1304 aaKnown RBP eCLIP20.43■□□□□ 0.861e-6■■■■■ 66.8
RPUSD3-216ENST00000484134 C15orf38-AP3S2A0A0A6YYH1 394 aa20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 LOC100653049A0A140TA62 436 aa20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 SMIM31A0A1B0GVY4 71 aa20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 CAPN8A6NHC0 703 aa20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 KRT34O76011 436 aa20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 ENDOD1O94919 500 aa20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 NR3C2P08235 984 aa20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 ITGAXP20702 1163 aa20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 RBL1P28749 1068 aa20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 ACTR2P61160 394 aa20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 USP46P62068 366 aa20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 YWHAEP62258 255 aaKnown RBP20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 XIAPP98170 497 aa20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 BAATQ14032 418 aaPredicted RBP20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 VWA5B1Q5TIE3 1220 aa20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 TMC7Q7Z402 723 aa20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 ARPINQ7Z6K5 226 aa20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 ZBTB33Q86T24 672 aa20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 WDR75Q8IWA0 830 aaKnown RBP20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 UNC5BQ8IZJ1 945 aa20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 DEFB107AQ8IZN7 70 aa20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 SDCBP2Q9H190 292 aa20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 ITGA11Q9UKX5 1188 aa20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 TMCO1Q9UM00 188 aa20.43■□□□□ 0.86
RPUSD3-216ENST00000484134 G3BP2Q9UN86 482 aaKnown RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms