RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 TERB1Q8NA31 727 aa18.98■□□□□ 0.63
ATG4B-221ENST00000483778 SLC4A11Q8NBS3 891 aa18.98■□□□□ 0.63
ATG4B-221ENST00000483778 NDRG1Q92597 394 aaKnown RBP18.98■□□□□ 0.63
ATG4B-221ENST00000483778 PIGKQ92643 395 aa18.98■□□□□ 0.63
ATG4B-221ENST00000483778 BHMTQ93088 406 aa18.98■□□□□ 0.63
ATG4B-221ENST00000483778 BBS2Q9BXC9 721 aa18.98■□□□□ 0.63
ATG4B-221ENST00000483778 TMEM74BQ9NUR3 256 aa18.98■□□□□ 0.63
ATG4B-221ENST00000483778 DNAJC17Q9NVM6 304 aaKnown RBP18.98■□□□□ 0.63
ATG4B-221ENST00000483778 PLK2Q9NYY3 685 aa18.98■□□□□ 0.63
ATG4B-221ENST00000483778 USP3Q9Y6I4 520 aa18.98■□□□□ 0.63
ATG4B-221ENST00000483778 A0A1W2PQF6 199 aa18.97■□□□□ 0.63
ATG4B-221ENST00000483778 CDX4O14627 284 aaPredicted RBP18.97■□□□□ 0.63
ATG4B-221ENST00000483778 KRT37O76014 449 aa18.97■□□□□ 0.63
ATG4B-221ENST00000483778 STC2O76061 302 aa18.97■□□□□ 0.63
ATG4B-221ENST00000483778 TYRP14679 529 aa18.97■□□□□ 0.63
ATG4B-221ENST00000483778 GABRG2P18507 467 aa18.97■□□□□ 0.63
ATG4B-221ENST00000483778 HSF5Q4G112 596 aaPredicted RBP18.97■□□□□ 0.63
ATG4B-221ENST00000483778 KRT39Q6A163 491 aa18.97■□□□□ 0.63
ATG4B-221ENST00000483778 KIAA1211LQ6NV74 962 aa18.97■□□□□ 0.63
ATG4B-221ENST00000483778 Q6ZNB5 142 aa18.97■□□□□ 0.63
ATG4B-221ENST00000483778 FMR1NBQ8N0W7 255 aaPredicted RBP18.97■□□□□ 0.63
ATG4B-221ENST00000483778 PGBD3Q8N328 593 aa18.97■□□□□ 0.63
ATG4B-221ENST00000483778 EDEM2Q9BV94 578 aa18.97■□□□□ 0.63
ATG4B-221ENST00000483778 IMPG2Q9BZV3 1241 aa18.97■□□□□ 0.63
ATG4B-221ENST00000483778 CD248Q9HCU0 757 aa18.97■□□□□ 0.63
ATG4B-221ENST00000483778 CISHQ9NSE2 258 aa18.97■□□□□ 0.63
ATG4B-221ENST00000483778 NAGPAQ9UK23 515 aa18.97■□□□□ 0.63
ATG4B-221ENST00000483778 WASH3PC4AMC7 463 aa18.96■□□□□ 0.63
ATG4B-221ENST00000483778 TULP2O00295 520 aa18.96■□□□□ 0.63
ATG4B-221ENST00000483778 CACNG3O60359 315 aa18.96■□□□□ 0.63
ATG4B-221ENST00000483778 ALDH1A2O94788 518 aa18.96■□□□□ 0.63
ATG4B-221ENST00000483778 KCNK5O95279 499 aa18.96■□□□□ 0.63
ATG4B-221ENST00000483778 GTF2H1P32780 548 aa18.96■□□□□ 0.63
ATG4B-221ENST00000483778 PLA2G4AP47712 749 aa18.96■□□□□ 0.63
ATG4B-221ENST00000483778 ENPEPQ07075 957 aa18.96■□□□□ 0.63
ATG4B-221ENST00000483778 EDRF1Q3B7T1 1238 aa18.96■□□□□ 0.63
ATG4B-221ENST00000483778 CBWD6Q4V339 395 aa18.96■□□□□ 0.63
ATG4B-221ENST00000483778 CBWD3Q5JTY5 395 aa18.96■□□□□ 0.63
ATG4B-221ENST00000483778 CBWD5Q5RIA9 395 aa18.96■□□□□ 0.63
ATG4B-221ENST00000483778 ANKRD40Q6AI12 368 aa18.96■□□□□ 0.63
ATG4B-221ENST00000483778 GRAMD4Q6IC98 578 aa18.96■□□□□ 0.63
ATG4B-221ENST00000483778 CCDC186Q7Z3E2 898 aa18.96■□□□□ 0.63
ATG4B-221ENST00000483778 CYP2U1Q7Z449 544 aa18.96■□□□□ 0.63
ATG4B-221ENST00000483778 SLC6A17Q9H1V8 727 aa18.96■□□□□ 0.63
ATG4B-221ENST00000483778 POLMQ9NP87 494 aaPredicted RBP18.96■□□□□ 0.63
ATG4B-221ENST00000483778 RAB20Q9NX57 234 aa18.96■□□□□ 0.63
ATG4B-221ENST00000483778 BCCIPQ9P287 314 aaKnown RBP eCLIP18.96■□□□□ 0.63
ATG4B-221ENST00000483778 DNMT3LQ9UJW3 386 aa18.96■□□□□ 0.63
ATG4B-221ENST00000483778 STARD13Q9Y3M8 1113 aa18.96■□□□□ 0.63
ATG4B-221ENST00000483778 PCDHA5Q9Y5H7 936 aa18.96■□□□□ 0.63
ATG4B-221ENST00000483778 KHNYNO15037 678 aaKnown RBP18.95■□□□□ 0.62
ATG4B-221ENST00000483778 MAP3K13O43283 966 aa18.95■□□□□ 0.62
ATG4B-221ENST00000483778 HMBSP08397 361 aa18.95■□□□□ 0.62
ATG4B-221ENST00000483778 FBXL13Q8NEE6 735 aa18.95■□□□□ 0.62
ATG4B-221ENST00000483778 TMEM176AQ96HP8 235 aa18.95■□□□□ 0.62
ATG4B-221ENST00000483778 PNPLA8Q9NP80 782 aa18.95■□□□□ 0.62
ATG4B-221ENST00000483778 CD93Q9NPY3 652 aa18.95■□□□□ 0.62
ATG4B-221ENST00000483778 FSCN3Q9NQT6 498 aa18.95■□□□□ 0.62
ATG4B-221ENST00000483778 MARK1Q9P0L2 795 aa18.95■□□□□ 0.62
ATG4B-221ENST00000483778 USP24Q9UPU5 2620 aa18.95■□□□□ 0.62
ATG4B-221ENST00000483778 CACNA1EQ15878 2313 aa18.95■□□□□ 0.62
ATG4B-221ENST00000483778 FRYQ5TBA9 3013 aa18.95■□□□□ 0.62
ATG4B-221ENST00000483778 PMLP29590 882 aa18.94■□□□□ 0.62
ATG4B-221ENST00000483778 NTSR1P30989 418 aa18.94■□□□□ 0.62
ATG4B-221ENST00000483778 MXI1P50539 228 aa18.94■□□□□ 0.62
ATG4B-221ENST00000483778 KLHDC10Q6PID8 442 aa18.94■□□□□ 0.62
ATG4B-221ENST00000483778 LPCAT2Q7L5N7 544 aa18.94■□□□□ 0.62
ATG4B-221ENST00000483778 PIGZQ86VD9 579 aa18.94■□□□□ 0.62
ATG4B-221ENST00000483778 ENGASEQ8NFI3 743 aa18.94■□□□□ 0.62
ATG4B-221ENST00000483778 DDX1Q92499 740 aaKnown RBP18.94■□□□□ 0.62
ATG4B-221ENST00000483778 WDR35Q9P2L0 1181 aa18.94■□□□□ 0.62
ATG4B-221ENST00000483778 FBXO10Q9UK96 956 aa18.94■□□□□ 0.62
ATG4B-221ENST00000483778 CLEC4EQ9ULY5 219 aa18.94■□□□□ 0.62
ATG4B-221ENST00000483778 GTF3C3Q9Y5Q9 886 aa18.94■□□□□ 0.62
ATG4B-221ENST00000483778 RAD54BQ9Y620 910 aa18.94■□□□□ 0.62
ATG4B-221ENST00000483778 ATXN2Q99700 1313 aaKnown RBP18.94■□□□□ 0.62
ATG4B-221ENST00000483778 TRIM49BA6NDI0 452 aa18.93■□□□□ 0.62
ATG4B-221ENST00000483778 CETN3O15182 167 aa18.93■□□□□ 0.62
ATG4B-221ENST00000483778 HOXB2P14652 356 aa18.93■□□□□ 0.62
ATG4B-221ENST00000483778 ITPKAP23677 461 aa18.93■□□□□ 0.62
ATG4B-221ENST00000483778 EFEMP1Q12805 493 aa18.93■□□□□ 0.62
ATG4B-221ENST00000483778 RAB41Q5JT25 222 aa18.93■□□□□ 0.62
ATG4B-221ENST00000483778 ISM2Q6H9L7 571 aa18.93■□□□□ 0.62
ATG4B-221ENST00000483778 PSAPL1Q6NUJ1 521 aa18.93■□□□□ 0.62
ATG4B-221ENST00000483778 BHLHA9Q7RTU4 235 aa18.93■□□□□ 0.62
ATG4B-221ENST00000483778 C11orf74Q86VG3 221 aa18.93■□□□□ 0.62
ATG4B-221ENST00000483778 ZC3H3Q8IXZ2 948 aaKnown RBP18.93■□□□□ 0.62
ATG4B-221ENST00000483778 ZNF276Q8N554 614 aa18.93■□□□□ 0.62
ATG4B-221ENST00000483778 KCNV2Q8TDN2 545 aa18.93■□□□□ 0.62
ATG4B-221ENST00000483778 CACNA2D2Q9NY47 1150 aa18.93■□□□□ 0.62
ATG4B-221ENST00000483778 CALCOCO1Q9P1Z2 691 aa18.93■□□□□ 0.62
ATG4B-221ENST00000483778 RASAL2Q9UJF2 1139 aa18.93■□□□□ 0.62
ATG4B-221ENST00000483778 LSM7Q9UK45 103 aaKnown RBP18.93■□□□□ 0.62
ATG4B-221ENST00000483778 ATP6V1DQ9Y5K8 247 aa18.93■□□□□ 0.62
ATG4B-221ENST00000483778 CEP295Q9C0D2 2601 aa18.93■□□□□ 0.62
ATG4B-221ENST00000483778 GABBR2O75899 941 aa18.92■□□□□ 0.62
ATG4B-221ENST00000483778 CALCAP01258 141 aa18.92■□□□□ 0.62
ATG4B-221ENST00000483778 EPB41P11171 864 aaKnown RBP18.92■□□□□ 0.62
ATG4B-221ENST00000483778 DGKGP49619 791 aa18.92■□□□□ 0.62
ATG4B-221ENST00000483778 ZNF658Q5TYW1 1059 aaPredicted RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms