RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 CHRM1P11229 460 aaPredicted RBP16.63■□□□□ 0.25
GARNL3-215ENST00000478702 SPINK2P20155 84 aa16.63■□□□□ 0.25
GARNL3-215ENST00000478702 TUBP50607 506 aa16.63■□□□□ 0.25
GARNL3-215ENST00000478702 SEC13P55735 322 aa16.63■□□□□ 0.25
GARNL3-215ENST00000478702 SLC7A9P82251 487 aa16.63■□□□□ 0.25
GARNL3-215ENST00000478702 ZNF252P-AS1Q0IIN9 211 aa16.63■□□□□ 0.25
GARNL3-215ENST00000478702 CETN1Q12798 172 aa16.63■□□□□ 0.25
GARNL3-215ENST00000478702 C2orf27AQ580R0 203 aa16.63■□□□□ 0.25
GARNL3-215ENST00000478702 SH3PXD2AQ5TCZ1 1133 aa16.63■□□□□ 0.25
GARNL3-215ENST00000478702 SNX30Q5VWJ9 437 aa16.63■□□□□ 0.25
GARNL3-215ENST00000478702 ARHGAP17Q68EM7 881 aa16.63■□□□□ 0.25
GARNL3-215ENST00000478702 UNQ6494/PRO21346Q6UXR6 183 aa16.63■□□□□ 0.25
GARNL3-215ENST00000478702 MDGA1Q8NFP4 955 aa16.63■□□□□ 0.25
GARNL3-215ENST00000478702 GPT2Q8TD30 523 aa16.63■□□□□ 0.25
GARNL3-215ENST00000478702 HEXIM2Q96MH2 286 aaKnown RBP16.63■□□□□ 0.25
GARNL3-215ENST00000478702 DUSP16Q9BY84 665 aa16.63■□□□□ 0.25
GARNL3-215ENST00000478702 FBXO44Q9H4M3 255 aa16.63■□□□□ 0.25
GARNL3-215ENST00000478702 GMIPQ9P107 970 aa16.63■□□□□ 0.25
GARNL3-215ENST00000478702 ZMIZ1Q9ULJ6 1067 aa16.63■□□□□ 0.25
GARNL3-215ENST00000478702 SPEGQ15772 3267 aa16.63■□□□□ 0.25
GARNL3-215ENST00000478702 BAHCC1Q9P281 2608 aa16.63■□□□□ 0.25
GARNL3-215ENST00000478702 CACNA1EQ15878 2313 aa16.62■□□□□ 0.25
GARNL3-215ENST00000478702 MESP2Q0VG99 397 aa16.62■□□□□ 0.25
GARNL3-215ENST00000478702 FOXC1Q12948 553 aa16.62■□□□□ 0.25
GARNL3-215ENST00000478702 NR1H3Q13133 447 aa16.62■□□□□ 0.25
GARNL3-215ENST00000478702 USP39Q53GS9 565 aaKnown RBP16.62■□□□□ 0.25
GARNL3-215ENST00000478702 DAB2IPQ5VWQ8 1189 aa16.62■□□□□ 0.25
GARNL3-215ENST00000478702 ANO7Q6IWH7 933 aa16.62■□□□□ 0.25
GARNL3-215ENST00000478702 TMEM92Q6UXU6 159 aa16.62■□□□□ 0.25
GARNL3-215ENST00000478702 SFTPA1Q8IWL2 248 aa16.62■□□□□ 0.25
GARNL3-215ENST00000478702 PPM1KQ8N3J5 372 aa16.62■□□□□ 0.25
GARNL3-215ENST00000478702 JAKMIP2Q96AA8 810 aa16.62■□□□□ 0.25
GARNL3-215ENST00000478702 TMEM9BQ9NQ34 198 aa16.62■□□□□ 0.25
GARNL3-215ENST00000478702 DACH1Q9UI36 760 aa16.62■□□□□ 0.25
GARNL3-215ENST00000478702 MMP17Q9ULZ9 603 aa16.62■□□□□ 0.25
GARNL3-215ENST00000478702 PCDH15Q96QU1 1955 aa16.62■□□□□ 0.25
GARNL3-215ENST00000478702 GOLGA6L22H0YM25 854 aa16.61■□□□□ 0.25
GARNL3-215ENST00000478702 LEFTY2O00292 366 aa16.61■□□□□ 0.25
GARNL3-215ENST00000478702 KHNYNO15037 678 aaKnown RBP16.61■□□□□ 0.25
GARNL3-215ENST00000478702 NFATC1O95644 943 aa16.61■□□□□ 0.25
GARNL3-215ENST00000478702 ABL1P00519 1130 aa16.61■□□□□ 0.25
GARNL3-215ENST00000478702 IRX4P78413 519 aa16.61■□□□□ 0.25
GARNL3-215ENST00000478702 GCNT1Q02742 428 aa16.61■□□□□ 0.25
GARNL3-215ENST00000478702 CRY1Q16526 586 aa16.61■□□□□ 0.25
GARNL3-215ENST00000478702 RBM43Q6ZSC3 357 aaKnown RBP16.61■□□□□ 0.25
GARNL3-215ENST00000478702 IRF2BP1Q8IU81 584 aa16.61■□□□□ 0.25
GARNL3-215ENST00000478702 ARHGEF19Q8IW93 802 aa16.61■□□□□ 0.25
GARNL3-215ENST00000478702 CCDC33Q8N5R6 958 aa16.61■□□□□ 0.25
GARNL3-215ENST00000478702 KIAA1958Q8N8K9 716 aa16.61■□□□□ 0.25
GARNL3-215ENST00000478702 OLIG1Q8TAK6 271 aa16.61■□□□□ 0.25
GARNL3-215ENST00000478702 KAT5Q92993 513 aa16.61■□□□□ 0.25
GARNL3-215ENST00000478702 RNF38Q9H0F5 515 aa16.61■□□□□ 0.25
GARNL3-215ENST00000478702 INTS2Q9H0H0 1204 aaKnown RBP16.61■□□□□ 0.25
GARNL3-215ENST00000478702 SCML2Q9UQR0 700 aa16.61■□□□□ 0.25
GARNL3-215ENST00000478702 CPQQ9Y646 472 aa16.61■□□□□ 0.25
GARNL3-215ENST00000478702 ZFYVE26Q68DK2 2539 aa16.6■□□□□ 0.25
GARNL3-215ENST00000478702 CYP26A1O43174 497 aa16.6■□□□□ 0.25
GARNL3-215ENST00000478702 COCHO43405 550 aa16.6■□□□□ 0.25
GARNL3-215ENST00000478702 CYP17A1P05093 508 aa16.6■□□□□ 0.25
GARNL3-215ENST00000478702 CEACAM1P13688 526 aa16.6■□□□□ 0.25
GARNL3-215ENST00000478702 CSRP1P21291 193 aaKnown RBP16.6■□□□□ 0.25
GARNL3-215ENST00000478702 ACO1P21399 889 aaKnown RBP16.6■□□□□ 0.25
GARNL3-215ENST00000478702 ERCC5P28715 1186 aaPredicted RBP16.6■□□□□ 0.25
GARNL3-215ENST00000478702 KIF11P52732 1056 aa16.6■□□□□ 0.25
GARNL3-215ENST00000478702 GOLGA7BQ2TAP0 167 aa16.6■□□□□ 0.25
GARNL3-215ENST00000478702 SGO2Q562F6 1265 aa16.6■□□□□ 0.25
GARNL3-215ENST00000478702 HECTD3Q5T447 861 aa16.6■□□□□ 0.25
GARNL3-215ENST00000478702 CCDC186Q7Z3E2 898 aa16.6■□□□□ 0.25
GARNL3-215ENST00000478702 CYP2U1Q7Z449 544 aa16.6■□□□□ 0.25
GARNL3-215ENST00000478702 C11orf74Q86VG3 221 aa16.6■□□□□ 0.25
GARNL3-215ENST00000478702 TTC30AQ86WT1 665 aa16.6■□□□□ 0.25
GARNL3-215ENST00000478702 DDX42Q86XP3 938 aaKnown RBP eCLIP16.6■□□□□ 0.25
GARNL3-215ENST00000478702 FRMD1Q8N878 549 aa16.6■□□□□ 0.25
GARNL3-215ENST00000478702 KDF1Q8NAX2 398 aaPredicted RBP16.6■□□□□ 0.25
GARNL3-215ENST00000478702 ZFRQ96KR1 1074 aaKnown RBP16.6■□□□□ 0.25
GARNL3-215ENST00000478702 ADAM33Q9BZ11 813 aa16.6■□□□□ 0.25
GARNL3-215ENST00000478702 THAP9Q9H5L6 903 aa16.6■□□□□ 0.25
GARNL3-215ENST00000478702 CCSER2Q9H7U1 834 aa16.6■□□□□ 0.25
GARNL3-215ENST00000478702 TLR8Q9NR97 1041 aaKnown RBP16.6■□□□□ 0.25
GARNL3-215ENST00000478702 TLR5O60602 858 aa16.59■□□□□ 0.25
GARNL3-215ENST00000478702 PAEPP09466 180 aa16.59■□□□□ 0.25
GARNL3-215ENST00000478702 MBL2P11226 248 aaPredicted RBP16.59■□□□□ 0.25
GARNL3-215ENST00000478702 CD19P15391 556 aa16.59■□□□□ 0.25
GARNL3-215ENST00000478702 SLC6A11P48066 632 aa16.59■□□□□ 0.25
GARNL3-215ENST00000478702 DHPSP49366 369 aaPredicted RBP16.59■□□□□ 0.25
GARNL3-215ENST00000478702 PGFP49763 221 aa16.59■□□□□ 0.25
GARNL3-215ENST00000478702 BCAT1P54687 386 aa16.59■□□□□ 0.25
GARNL3-215ENST00000478702 MRPS21P82921 87 aaKnown RBP16.59■□□□□ 0.25
GARNL3-215ENST00000478702 TPD52L1Q16890 204 aaPredicted RBP16.59■□□□□ 0.25
GARNL3-215ENST00000478702 TMEM270Q6UE05 265 aa16.59■□□□□ 0.25
GARNL3-215ENST00000478702 C12orf40Q86WS4 652 aa16.59■□□□□ 0.25
GARNL3-215ENST00000478702 ADGRG2Q8IZP9 1017 aa16.59■□□□□ 0.25
GARNL3-215ENST00000478702 ANKRD52Q8NB46 1076 aa16.59■□□□□ 0.25
GARNL3-215ENST00000478702 EHBP1Q8NDI1 1231 aa16.59■□□□□ 0.25
GARNL3-215ENST00000478702 CCDC26Q8TAB7 109 aa16.59■□□□□ 0.25
GARNL3-215ENST00000478702 RLN3Q8WXF3 142 aa16.59■□□□□ 0.25
GARNL3-215ENST00000478702 CYLDQ9NQC7 956 aa16.59■□□□□ 0.25
GARNL3-215ENST00000478702 SMPD4Q9NXE4 827 aa16.59■□□□□ 0.25
GARNL3-215ENST00000478702 CHORDC1Q9UHD1 332 aaPredicted RBP16.59■□□□□ 0.25
GARNL3-215ENST00000478702 TSPAN16Q9UKR8 245 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms