RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 YAF2Q8IY57 180 aa4.78□□□□□ -1.64
CDC42BPA-212ENST00000478573 SYTL1Q8IYJ3 562 aa4.78□□□□□ -1.64
CDC42BPA-212ENST00000478573 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.78□□□□□ -1.64
CDC42BPA-212ENST00000478573 ZNF566Q969W8 418 aa4.78□□□□□ -1.64
CDC42BPA-212ENST00000478573 MS4A7Q9GZW8 240 aaPredicted RBP4.78□□□□□ -1.64
CDC42BPA-212ENST00000478573 TM7SF3Q9NS93 570 aa4.78□□□□□ -1.64
CDC42BPA-212ENST00000478573 DLL3Q9NYJ7 618 aa4.78□□□□□ -1.64
CDC42BPA-212ENST00000478573 ZNF212Q9UDV6 495 aa4.78□□□□□ -1.64
CDC42BPA-212ENST00000478573 CAPN11Q9UMQ6 739 aa4.78□□□□□ -1.64
CDC42BPA-212ENST00000478573 BTBD3Q9Y2F9 522 aa4.78□□□□□ -1.64
CDC42BPA-212ENST00000478573 TTC37Q6PGP7 1564 aa4.78□□□□□ -1.64
CDC42BPA-212ENST00000478573 CDC42BPBQ9Y5S2 1711 aa4.77□□□□□ -1.65
CDC42BPA-212ENST00000478573 LOC102723971A0A1B0GUV8 181 aa4.77□□□□□ -1.65
CDC42BPA-212ENST00000478573 GOLGA6L3A6NEY3 463 aa4.77□□□□□ -1.65
CDC42BPA-212ENST00000478573 KCNU1A8MYU2 1149 aa4.77□□□□□ -1.65
CDC42BPA-212ENST00000478573 SLC16A3O15427 465 aaKnown RBP4.77□□□□□ -1.65
CDC42BPA-212ENST00000478573 FFAR2O15552 330 aa4.77□□□□□ -1.65
CDC42BPA-212ENST00000478573 CCP110O43303 1012 aa4.77□□□□□ -1.65
CDC42BPA-212ENST00000478573 KCNQ3O43525 872 aa4.77□□□□□ -1.65
CDC42BPA-212ENST00000478573 PIP5K1CO60331 668 aa4.77□□□□□ -1.65
CDC42BPA-212ENST00000478573 TLR5O60602 858 aa4.77□□□□□ -1.65
CDC42BPA-212ENST00000478573 NBNO60934 754 aa4.77□□□□□ -1.65
CDC42BPA-212ENST00000478573 INMTO95050 263 aa4.77□□□□□ -1.65
CDC42BPA-212ENST00000478573 A1BGP04217 495 aa4.77□□□□□ -1.65
CDC42BPA-212ENST00000478573 FESP07332 822 aa4.77□□□□□ -1.65
CDC42BPA-212ENST00000478573 IL6RP08887 468 aaPredicted RBP4.77□□□□□ -1.65
CDC42BPA-212ENST00000478573 ATXN1LP0C7T5 689 aaKnown RBP4.77□□□□□ -1.65
CDC42BPA-212ENST00000478573 IL1R2P27930 398 aa4.77□□□□□ -1.65
CDC42BPA-212ENST00000478573 HALP42357 657 aa4.77□□□□□ -1.65
CDC42BPA-212ENST00000478573 GRK6P43250 576 aa4.77□□□□□ -1.65
CDC42BPA-212ENST00000478573 CCT4P50991 539 aaKnown RBP4.77□□□□□ -1.65
CDC42BPA-212ENST00000478573 STARD3Q14849 445 aa4.77□□□□□ -1.65
CDC42BPA-212ENST00000478573 PUM3Q15397 648 aaKnown RBP4.77□□□□□ -1.65
CDC42BPA-212ENST00000478573 ARHGAP40Q5TG30 622 aa4.77□□□□□ -1.65
CDC42BPA-212ENST00000478573 TLDC1Q6P9B6 456 aa4.77□□□□□ -1.65
CDC42BPA-212ENST00000478573 KRT28Q7Z3Y7 464 aa4.77□□□□□ -1.65
CDC42BPA-212ENST00000478573 TXLNBQ8N3L3 684 aa4.77□□□□□ -1.65
CDC42BPA-212ENST00000478573 MPP5Q8N3R9 675 aa4.77□□□□□ -1.65
CDC42BPA-212ENST00000478573 ANKRD42Q8N9B4 389 aa4.77□□□□□ -1.65
CDC42BPA-212ENST00000478573 PNLDC1Q8NA58 520 aaKnown RBP4.77□□□□□ -1.65
CDC42BPA-212ENST00000478573 PPP1R9BQ96SB3 815 aa4.77□□□□□ -1.65
CDC42BPA-212ENST00000478573 NELL2Q99435 816 aa4.77□□□□□ -1.65
CDC42BPA-212ENST00000478573 MACROD1Q9BQ69 325 aa4.77□□□□□ -1.65
CDC42BPA-212ENST00000478573 STK31Q9BXU1 1019 aa4.77□□□□□ -1.65
CDC42BPA-212ENST00000478573 AGO4Q9HCK5 861 aaKnown RBP4.77□□□□□ -1.65
CDC42BPA-212ENST00000478573 GJB4Q9NTQ9 266 aa4.77□□□□□ -1.65
CDC42BPA-212ENST00000478573 ITGB1BP2Q9UKP3 347 aa4.77□□□□□ -1.65
CDC42BPA-212ENST00000478573 CEP83Q9Y592 693 aa4.77□□□□□ -1.65
CDC42BPA-212ENST00000478573 FRMPD1Q5SYB0 1578 aa4.77□□□□□ -1.65
CDC42BPA-212ENST00000478573 ARHGEF40Q8TER5 1519 aa4.77□□□□□ -1.65
CDC42BPA-212ENST00000478573 CCDC18Q5T9S5 1454 aa4.76□□□□□ -1.65
CDC42BPA-212ENST00000478573 ARHGAP35Q9NRY4 1499 aa4.76□□□□□ -1.65
CDC42BPA-212ENST00000478573 hCG_1642624A0A1W2PR95 340 aa4.76□□□□□ -1.65
CDC42BPA-212ENST00000478573 PRRT4C9JH25 899 aa4.76□□□□□ -1.65
CDC42BPA-212ENST00000478573 DCLK1O15075 740 aa4.76□□□□□ -1.65
CDC42BPA-212ENST00000478573 ACVR2AP27037 513 aa4.76□□□□□ -1.65
CDC42BPA-212ENST00000478573 MMP13P45452 471 aa4.76□□□□□ -1.65
CDC42BPA-212ENST00000478573 CYP4F2P78329 520 aa4.76□□□□□ -1.65
CDC42BPA-212ENST00000478573 SP2Q02086 613 aa4.76□□□□□ -1.65
CDC42BPA-212ENST00000478573 BLMHQ13867 455 aa4.76□□□□□ -1.65
CDC42BPA-212ENST00000478573 TRIM14Q14142 442 aa4.76□□□□□ -1.65
CDC42BPA-212ENST00000478573 IQCB1Q15051 598 aa4.76□□□□□ -1.65
CDC42BPA-212ENST00000478573 FHOD3Q2V2M9 1422 aa4.76□□□□□ -1.65
CDC42BPA-212ENST00000478573 FMN1Q68DA7 1419 aa4.76□□□□□ -1.65
CDC42BPA-212ENST00000478573 SFRP4Q6FHJ7 346 aaPredicted RBP4.76□□□□□ -1.65
CDC42BPA-212ENST00000478573 USP17L6PQ6QN14 398 aa4.76□□□□□ -1.65
CDC42BPA-212ENST00000478573 WDR53Q7Z5U6 358 aaPredicted RBP4.76□□□□□ -1.65
CDC42BPA-212ENST00000478573 DTX2Q86UW9 622 aa4.76□□□□□ -1.65
CDC42BPA-212ENST00000478573 ZNF527Q8NB42 609 aa4.76□□□□□ -1.65
CDC42BPA-212ENST00000478573 MYRIPQ8NFW9 859 aa4.76□□□□□ -1.65
CDC42BPA-212ENST00000478573 PPM1EQ8WY54 764 aa4.76□□□□□ -1.65
CDC42BPA-212ENST00000478573 MAGEB5Q9BZ81 275 aa4.76□□□□□ -1.65
CDC42BPA-212ENST00000478573 NECTIN3Q9NQS3 549 aa4.76□□□□□ -1.65
CDC42BPA-212ENST00000478573 DUSP22Q9NRW4 184 aa4.76□□□□□ -1.65
CDC42BPA-212ENST00000478573 MID2Q9UJV3 735 aa4.76□□□□□ -1.65
CDC42BPA-212ENST00000478573 SHOC2Q9UQ13 582 aa4.76□□□□□ -1.65
CDC42BPA-212ENST00000478573 MAN2B2Q9Y2E5 1009 aa4.76□□□□□ -1.65
CDC42BPA-212ENST00000478573 MORC2Q9Y6X9 1032 aaPredicted RBP4.76□□□□□ -1.65
CDC42BPA-212ENST00000478573 ZMYM4Q5VZL5 1548 aa4.76□□□□□ -1.65
CDC42BPA-212ENST00000478573 ATP10BO94823 1461 aa4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 FYCO1Q9BQS8 1478 aa4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 A0A087WZ62 844 aa4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 MOSPD3O75425 235 aa4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 SKAP2O75563 359 aaPredicted RBP4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 RASSF9O75901 435 aa4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 CSTBP04080 98 aaKnown RBP4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 TUBB4AP04350 444 aa4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 BTF3P20290 206 aaKnown RBP4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 GABRB3P28472 473 aa4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 PDIA3P30101 505 aaKnown RBP4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 PXNP49023 591 aaPredicted RBP4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 COPAP53621 1224 aa4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 LOXL3P58215 753 aa4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 LILRA4P59901 499 aa4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 ARHGEF7Q14155 803 aa4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 SLC29A2Q14542 456 aa4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 NPY5RQ15761 445 aa4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 INSCQ1MX18 579 aa4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 PLA1AQ53H76 456 aa4.75□□□□□ -1.65
CDC42BPA-212ENST00000478573 FCRL6Q6DN72 434 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms