RNA–Protein interactions for RNA: ENST00000478015.5

LCLAT1-209, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2

Gene LCLAT1, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-209ENST00000478015 LONP2Q86WA8 852 aa10.74□□□□□ -0.69
LCLAT1-209ENST00000478015 CREBRFQ8IUR6 639 aa10.74□□□□□ -0.69
LCLAT1-209ENST00000478015 RBBP8NLQ8NC74 664 aaPredicted RBP10.74□□□□□ -0.69
LCLAT1-209ENST00000478015 SECISBP2LQ93073 1101 aaKnown RBP10.74□□□□□ -0.69
LCLAT1-209ENST00000478015 GTPBP4Q9BZE4 634 aaKnown RBP10.74□□□□□ -0.69
LCLAT1-209ENST00000478015 UBXN6Q9BZV1 441 aa10.74□□□□□ -0.69
LCLAT1-209ENST00000478015 NACA2Q9H009 215 aa10.74□□□□□ -0.69
LCLAT1-209ENST00000478015 SIX2Q9NPC8 291 aa10.74□□□□□ -0.69
LCLAT1-209ENST00000478015 SFMBT1Q9UHJ3 866 aa10.74□□□□□ -0.69
LCLAT1-209ENST00000478015 DNMT3LQ9UJW3 386 aa10.74□□□□□ -0.69
LCLAT1-209ENST00000478015 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.74□□□□□ -0.69
LCLAT1-209ENST00000478015 CNTN6Q9UQ52 1028 aa10.74□□□□□ -0.69
LCLAT1-209ENST00000478015 SH3BP1Q9Y3L3 701 aa10.74□□□□□ -0.69
LCLAT1-209ENST00000478015 CEP295Q9C0D2 2601 aa10.73□□□□□ -0.69
LCLAT1-209ENST00000478015 NUP205Q92621 2012 aa10.73□□□□□ -0.69
LCLAT1-209ENST00000478015 NEDD8-MDP1E9PL57 170 aa10.73□□□□□ -0.69
LCLAT1-209ENST00000478015 HOXC11O43248 304 aaPredicted RBP10.73□□□□□ -0.69
LCLAT1-209ENST00000478015 MSI1O43347 362 aaKnown RBP10.73□□□□□ -0.69
LCLAT1-209ENST00000478015 VDRP11473 427 aa10.73□□□□□ -0.69
LCLAT1-209ENST00000478015 TIE1P35590 1138 aa10.73□□□□□ -0.69
LCLAT1-209ENST00000478015 PI4KAP42356 2102 aa10.73□□□□□ -0.69
LCLAT1-209ENST00000478015 YWHAGP61981 247 aaKnown RBP eCLIP10.73□□□□□ -0.69
LCLAT1-209ENST00000478015 GCNT1Q02742 428 aa10.73□□□□□ -0.69
LCLAT1-209ENST00000478015 BST2Q10589 180 aaKnown RBP10.73□□□□□ -0.69
LCLAT1-209ENST00000478015 ANO4Q32M45 955 aa10.73□□□□□ -0.69
LCLAT1-209ENST00000478015 MIIPQ5JXC2 388 aa10.73□□□□□ -0.69
LCLAT1-209ENST00000478015 TRIM65Q6PJ69 517 aa10.73□□□□□ -0.69
LCLAT1-209ENST00000478015 PRR23BQ6ZRT6 265 aa10.73□□□□□ -0.69
LCLAT1-209ENST00000478015 KBTBD6Q86V97 674 aa10.73□□□□□ -0.69
LCLAT1-209ENST00000478015 FAM160A2Q8N612 972 aaPredicted RBP10.73□□□□□ -0.69
LCLAT1-209ENST00000478015 KIAA1958Q8N8K9 716 aa10.73□□□□□ -0.69
LCLAT1-209ENST00000478015 PIWIL1Q96J94 861 aaKnown RBP10.73□□□□□ -0.69
LCLAT1-209ENST00000478015 PNKPQ96T60 521 aa10.73□□□□□ -0.69
LCLAT1-209ENST00000478015 CD248Q9HCU0 757 aa10.73□□□□□ -0.69
LCLAT1-209ENST00000478015 UBE2TQ9NPD8 197 aaPredicted RBP10.73□□□□□ -0.69
LCLAT1-209ENST00000478015 ARHGEF4Q9NR80 690 aa10.73□□□□□ -0.69
LCLAT1-209ENST00000478015 RXFP3Q9NSD7 469 aa10.73□□□□□ -0.69
LCLAT1-209ENST00000478015 SAMSN1Q9NSI8 373 aaKnown RBP10.73□□□□□ -0.69
LCLAT1-209ENST00000478015 CLIC5Q9NZA1 410 aa10.73□□□□□ -0.69
LCLAT1-209ENST00000478015 TBC1D14Q9P2M4 693 aa10.73□□□□□ -0.69
LCLAT1-209ENST00000478015 AGO1Q9UL18 857 aaKnown RBP10.73□□□□□ -0.69
LCLAT1-209ENST00000478015 THADAQ6YHU6 1953 aa10.73□□□□□ -0.69
LCLAT1-209ENST00000478015 FAM170AA1A519 330 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 WASH3PC4AMC7 463 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 SLC9A3R1O14745 358 aaPredicted RBP10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 P4HA2O15460 535 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 PAEPP09466 180 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 CISD3P0C7P0 127 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 LCP1P13796 627 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 TYRP14679 529 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 TBXAS1P24557 533 aaPredicted RBP10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 PON1P27169 355 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 PPP1R2P41236 205 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 GPD2P43304 727 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 BCAT1P54687 386 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 SPEM2Q0P670 501 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 NR1H3Q13133 447 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 SIM2Q14190 667 aaPredicted RBP10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 CNGA2Q16280 664 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 CRY1Q16526 586 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 BSPRYQ5W0U4 402 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 DENND1BQ6P3S1 775 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 WDR5BQ86VZ2 330 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 DDX42Q86XP3 938 aaKnown RBP eCLIP10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 ZNF276Q8N554 614 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 TXNDC5Q8NBS9 432 aaKnown RBP10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 MDGA1Q8NFP4 955 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 MYEOVQ96EZ4 313 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 HINFPQ9BQA5 517 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 TPSD1Q9BZJ3 242 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 SMOC1Q9H4F8 434 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 FAM124BQ9H5Z6 455 aaPredicted RBP10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 RASAL2Q9UJF2 1139 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 NUMA1Q14980 2115 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 GDF9O60383 454 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 ADH1CP00326 375 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 SGSHP51688 502 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 NRLP54845 237 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 DAOAP59103 153 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 AMPD2Q01433 879 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 FBXO43Q4G163 708 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 FYB2Q5VWT5 728 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 DENND1CQ8IV53 801 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 SCUBE3Q8IX30 993 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 TTC39CQ8N584 583 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 WDTC1Q8N5D0 677 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 KCTD13Q8WZ19 329 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 OTUB2Q96DC9 234 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 BBS2Q9BXC9 721 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 CD93Q9NPY3 652 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 MARCH2Q9P0N8 246 aa10.72□□□□□ -0.69
LCLAT1-209ENST00000478015 CACNA1EQ15878 2313 aa10.71□□□□□ -0.69
LCLAT1-209ENST00000478015 M0QYV0 167 aa10.71□□□□□ -0.69
LCLAT1-209ENST00000478015 GFRA2O00451 464 aa10.71□□□□□ -0.69
LCLAT1-209ENST00000478015 CACNG3O60359 315 aa10.71□□□□□ -0.69
LCLAT1-209ENST00000478015 KLF8O95600 359 aaPredicted RBP10.71□□□□□ -0.69
LCLAT1-209ENST00000478015 GNA14O95837 355 aa10.71□□□□□ -0.69
LCLAT1-209ENST00000478015 BCKDHBP21953 392 aa10.71□□□□□ -0.69
LCLAT1-209ENST00000478015 CORO1AP31146 461 aaKnown RBP10.71□□□□□ -0.69
LCLAT1-209ENST00000478015 EIF2DP41214 584 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms