RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 LCP1P13796 627 aa12.64□□□□□ -0.39
PRPF39-203ENST00000477626 GCAP28676 217 aa12.64□□□□□ -0.39
PRPF39-203ENST00000477626 CYP2C18P33260 490 aa12.64□□□□□ -0.39
PRPF39-203ENST00000477626 TKTL1P51854 596 aa12.64□□□□□ -0.39
PRPF39-203ENST00000477626 NRG1Q02297 640 aaPredicted RBP12.64□□□□□ -0.39
PRPF39-203ENST00000477626 PRKD1Q15139 912 aaPredicted RBP12.64□□□□□ -0.39
PRPF39-203ENST00000477626 PAN2Q504Q3 1202 aaKnown RBP12.64□□□□□ -0.39
PRPF39-203ENST00000477626 BOLA3Q53S33 107 aa12.64□□□□□ -0.39
PRPF39-203ENST00000477626 FAM72AQ5TYM5 149 aa12.64□□□□□ -0.39
PRPF39-203ENST00000477626 FAM72DQ6L9T8 149 aa12.64□□□□□ -0.39
PRPF39-203ENST00000477626 LRIG3Q6UXM1 1119 aa12.64□□□□□ -0.39
PRPF39-203ENST00000477626 FAM72BQ86X60 149 aa12.64□□□□□ -0.39
PRPF39-203ENST00000477626 TTC9BQ8N6N2 239 aa12.64□□□□□ -0.39
PRPF39-203ENST00000477626 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.64□□□□□ -0.39
PRPF39-203ENST00000477626 FBXW11Q9UKB1 542 aa12.64□□□□□ -0.39
PRPF39-203ENST00000477626 AP1G2O75843 785 aa12.64□□□□□ -0.39
PRPF39-203ENST00000477626 TIMP1P01033 207 aa12.64□□□□□ -0.39
PRPF39-203ENST00000477626 HCAR3P49019 387 aa12.64□□□□□ -0.39
PRPF39-203ENST00000477626 USP46P62068 366 aa12.64□□□□□ -0.39
PRPF39-203ENST00000477626 BYSLQ13895 437 aaKnown RBP12.64□□□□□ -0.39
PRPF39-203ENST00000477626 PAFAH1B3Q15102 231 aaKnown RBP12.64□□□□□ -0.39
PRPF39-203ENST00000477626 ALS2CLQ60I27 953 aa12.64□□□□□ -0.39
PRPF39-203ENST00000477626 PYROXD2Q8N2H3 581 aa12.64□□□□□ -0.39
PRPF39-203ENST00000477626 SEPT8Q92599 483 aa12.64□□□□□ -0.39
PRPF39-203ENST00000477626 ZNF419Q96HQ0 510 aaPredicted RBP12.64□□□□□ -0.39
PRPF39-203ENST00000477626 CSPG4P5Q96PW8 444 aa12.64□□□□□ -0.39
PRPF39-203ENST00000477626 TTLL2Q9BWV7 592 aa12.64□□□□□ -0.39
PRPF39-203ENST00000477626 RAB17Q9H0T7 212 aa12.64□□□□□ -0.39
PRPF39-203ENST00000477626 ETNK2Q9NVF9 386 aa12.64□□□□□ -0.39
PRPF39-203ENST00000477626 SCML2Q9UQR0 700 aa12.64□□□□□ -0.39
PRPF39-203ENST00000477626 USTQ9Y2C2 406 aa12.64□□□□□ -0.39
PRPF39-203ENST00000477626 SHROOM3Q8TF72 1996 aa12.64□□□□□ -0.39
PRPF39-203ENST00000477626 NUP210Q8TEM1 1887 aaPredicted RBP12.63□□□□□ -0.39
PRPF39-203ENST00000477626 BCLAF3A2AJT9 711 aaKnown RBP12.63□□□□□ -0.39
PRPF39-203ENST00000477626 PQBP1O60828 265 aaKnown RBP12.63□□□□□ -0.39
PRPF39-203ENST00000477626 ERLIN1O75477 346 aa12.63□□□□□ -0.39
PRPF39-203ENST00000477626 PAPLNO95428 1278 aa12.63□□□□□ -0.39
PRPF39-203ENST00000477626 GGCXP38435 758 aa12.63□□□□□ -0.39
PRPF39-203ENST00000477626 HTRA4P83105 476 aaPredicted RBP12.63□□□□□ -0.39
PRPF39-203ENST00000477626 ZNF844Q08AG5 666 aa12.63□□□□□ -0.39
PRPF39-203ENST00000477626 ZNF534Q76KX8 674 aa12.63□□□□□ -0.39
PRPF39-203ENST00000477626 SCAMP5Q8TAC9 235 aa12.63□□□□□ -0.39
PRPF39-203ENST00000477626 FAM118BQ9BPY3 351 aa12.63□□□□□ -0.39
PRPF39-203ENST00000477626 ETS1P14921 441 aa12.63□□□□□ -0.39
PRPF39-203ENST00000477626 TGM2P21980 687 aa12.63□□□□□ -0.39
PRPF39-203ENST00000477626 KCNJ11Q14654 390 aa12.63□□□□□ -0.39
PRPF39-203ENST00000477626 SMC1AQ14683 1233 aaKnown RBP12.63□□□□□ -0.39
PRPF39-203ENST00000477626 PRCCQ92733 491 aaPredicted RBP12.63□□□□□ -0.39
PRPF39-203ENST00000477626 SMOC2Q9H3U7 446 aa12.63□□□□□ -0.39
PRPF39-203ENST00000477626 ZWILCHQ9H900 591 aa12.63□□□□□ -0.39
PRPF39-203ENST00000477626 NMUR1Q9HB89 426 aa12.63□□□□□ -0.39
PRPF39-203ENST00000477626 HSFX1Q9UBD0 423 aa12.63□□□□□ -0.39
PRPF39-203ENST00000477626 NOD1Q9Y239 953 aa12.63□□□□□ -0.39
PRPF39-203ENST00000477626 SCN8AQ9UQD0 1980 aa12.63□□□□□ -0.39
PRPF39-203ENST00000477626 GOLGA6L10A0A0M3HER8 536 aa12.63□□□□□ -0.39
PRPF39-203ENST00000477626 TCEA3O75764 348 aa12.63□□□□□ -0.39
PRPF39-203ENST00000477626 ABLIM3O94929 683 aa12.63□□□□□ -0.39
PRPF39-203ENST00000477626 ECEL1O95672 775 aa12.63□□□□□ -0.39
PRPF39-203ENST00000477626 OTUD4Q01804 1114 aaKnown RBP12.63□□□□□ -0.39
PRPF39-203ENST00000477626 NPNTQ6UXI9 565 aa12.63□□□□□ -0.39
PRPF39-203ENST00000477626 DSTYKQ6XUX3 929 aa12.63□□□□□ -0.39
PRPF39-203ENST00000477626 ACTL9Q8TC94 416 aa12.63□□□□□ -0.39
PRPF39-203ENST00000477626 PRDM16Q9HAZ2 1276 aa12.63□□□□□ -0.39
PRPF39-203ENST00000477626 PCDH9Q9HC56 1237 aa12.63□□□□□ -0.39
PRPF39-203ENST00000477626 DMAP1Q9NPF5 467 aaPredicted RBP12.63□□□□□ -0.39
PRPF39-203ENST00000477626 ZBED1O96006 694 aa12.62□□□□□ -0.39
PRPF39-203ENST00000477626 ATF6P18850 670 aa12.62□□□□□ -0.39
PRPF39-203ENST00000477626 ITIH2P19823 946 aa12.62□□□□□ -0.39
PRPF39-203ENST00000477626 BDNFP23560 247 aa12.62□□□□□ -0.39
PRPF39-203ENST00000477626 MAP9Q49MG5 647 aa12.62□□□□□ -0.39
PRPF39-203ENST00000477626 UNC45BQ8IWX7 931 aa12.62□□□□□ -0.39
PRPF39-203ENST00000477626 SP7Q8TDD2 431 aaPredicted RBP12.62□□□□□ -0.39
PRPF39-203ENST00000477626 NCAPGQ9BPX3 1015 aa12.62□□□□□ -0.39
PRPF39-203ENST00000477626 MTRRQ9UBK8 725 aa12.62□□□□□ -0.39
PRPF39-203ENST00000477626 MTUS1Q9ULD2 1270 aa12.62□□□□□ -0.39
PRPF39-203ENST00000477626 UTP11Q9Y3A2 253 aaKnown RBP12.62□□□□□ -0.39
PRPF39-203ENST00000477626 ADAM12O43184 909 aa12.62□□□□□ -0.39
PRPF39-203ENST00000477626 USP17L7P0C7H9 530 aa12.62□□□□□ -0.39
PRPF39-203ENST00000477626 ZSCAN5DPP0CG00 497 aa12.62□□□□□ -0.39
PRPF39-203ENST00000477626 GBP1P32455 592 aa12.62□□□□□ -0.39
PRPF39-203ENST00000477626 RDXP35241 583 aaKnown RBP12.62□□□□□ -0.39
PRPF39-203ENST00000477626 GPR15P49685 360 aa12.62□□□□□ -0.39
PRPF39-203ENST00000477626 SLC5A3P53794 718 aa12.62□□□□□ -0.39
PRPF39-203ENST00000477626 YWHAHQ04917 246 aaPredicted RBP12.62□□□□□ -0.39
PRPF39-203ENST00000477626 PKN2Q16513 984 aaKnown RBP12.62□□□□□ -0.39
PRPF39-203ENST00000477626 SND1Q7KZF4 910 aaKnown RBP eCLIP12.62□□□□□ -0.39
PRPF39-203ENST00000477626 CEP295NLQ96MC4 621 aa12.62□□□□□ -0.39
PRPF39-203ENST00000477626 SNX24Q9Y343 169 aa12.62□□□□□ -0.39
PRPF39-203ENST00000477626 BACE2Q9Y5Z0 518 aa12.62□□□□□ -0.39
PRPF39-203ENST00000477626 EYSQ5T1H1 3165 aa12.62□□□□□ -0.39
PRPF39-203ENST00000477626 DNALI1O14645 258 aaPredicted RBP12.62□□□□□ -0.39
PRPF39-203ENST00000477626 CACNG3O60359 315 aa12.62□□□□□ -0.39
PRPF39-203ENST00000477626 CST8O60676 142 aa12.62□□□□□ -0.39
PRPF39-203ENST00000477626 CLTBP09497 229 aa12.62□□□□□ -0.39
PRPF39-203ENST00000477626 OR4Q2P0C623 313 aa12.62□□□□□ -0.39
PRPF39-203ENST00000477626 CYP2F1P24903 491 aa12.62□□□□□ -0.39
PRPF39-203ENST00000477626 SDC4P31431 198 aa12.62□□□□□ -0.39
PRPF39-203ENST00000477626 BCAR1P56945 870 aa12.62□□□□□ -0.39
PRPF39-203ENST00000477626 GPR17Q13304 367 aa12.62□□□□□ -0.39
PRPF39-203ENST00000477626 XRCC4Q13426 336 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms