RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 HSF5Q4G112 596 aaPredicted RBP22.81■■□□□ 1.24
COL9A3-211ENST00000477612 BTBD8Q5XKL5 378 aa22.81■■□□□ 1.24
COL9A3-211ENST00000477612 TRIM65Q6PJ69 517 aa22.81■■□□□ 1.24
COL9A3-211ENST00000477612 HSFY1Q96LI6 401 aa22.81■■□□□ 1.24
COL9A3-211ENST00000477612 DCLK3Q9C098 648 aa22.81■■□□□ 1.24
COL9A3-211ENST00000477612 UBE2TQ9NPD8 197 aaPredicted RBP22.81■■□□□ 1.24
COL9A3-211ENST00000477612 ARHGEF4Q9NR80 690 aa22.81■■□□□ 1.24
COL9A3-211ENST00000477612 EBF1Q9UH73 591 aa22.81■■□□□ 1.24
COL9A3-211ENST00000477612 TULP3O75386 442 aa22.8■■□□□ 1.24
COL9A3-211ENST00000477612 GABBR2O75899 941 aa22.8■■□□□ 1.24
COL9A3-211ENST00000477612 KLKB1P03952 638 aa22.8■■□□□ 1.24
COL9A3-211ENST00000477612 BRD2P25440 801 aaKnown RBP22.8■■□□□ 1.24
COL9A3-211ENST00000477612 KIR2DL1P43626 348 aaPredicted RBP22.8■■□□□ 1.24
COL9A3-211ENST00000477612 DAOAP59103 153 aa22.8■■□□□ 1.24
COL9A3-211ENST00000477612 EFEMP1Q12805 493 aa22.8■■□□□ 1.24
COL9A3-211ENST00000477612 HEATR6Q6AI08 1181 aaKnown RBP22.8■■□□□ 1.24
COL9A3-211ENST00000477612 PMF1Q6P1K2 205 aa22.8■■□□□ 1.24
COL9A3-211ENST00000477612 GBP6Q6ZN66 633 aa22.8■■□□□ 1.24
COL9A3-211ENST00000477612 MIB1Q86YT6 1006 aa22.8■■□□□ 1.24
COL9A3-211ENST00000477612 DCLK2Q8N568 766 aa22.8■■□□□ 1.24
COL9A3-211ENST00000477612 KCNV2Q8TDN2 545 aa22.8■■□□□ 1.24
COL9A3-211ENST00000477612 NDRG1Q92597 394 aaKnown RBP22.8■■□□□ 1.24
COL9A3-211ENST00000477612 SECISBP2LQ93073 1101 aaKnown RBP22.8■■□□□ 1.24
COL9A3-211ENST00000477612 OLA1Q9NTK5 396 aaKnown RBP22.8■■□□□ 1.24
COL9A3-211ENST00000477612 POLR3BQ9NW08 1133 aaPredicted RBP22.8■■□□□ 1.24
COL9A3-211ENST00000477612 WDR35Q9P2L0 1181 aa22.8■■□□□ 1.24
COL9A3-211ENST00000477612 DEC1Q9P2X7 70 aa22.8■■□□□ 1.24
COL9A3-211ENST00000477612 DACH1Q9UI36 760 aa22.8■■□□□ 1.24
COL9A3-211ENST00000477612 RASAL2Q9UJF2 1139 aa22.8■■□□□ 1.24
COL9A3-211ENST00000477612 MMP17Q9ULZ9 603 aa22.8■■□□□ 1.24
COL9A3-211ENST00000477612 SPTBN4Q9H254 2564 aa22.79■■□□□ 1.24
COL9A3-211ENST00000477612 ANTXRLA6NF34 631 aa22.79■■□□□ 1.24
COL9A3-211ENST00000477612 CACNG3O60359 315 aa22.79■■□□□ 1.24
COL9A3-211ENST00000477612 SLC9A1P19634 815 aa22.79■■□□□ 1.24
COL9A3-211ENST00000477612 SIM2Q14190 667 aaPredicted RBP22.79■■□□□ 1.24
COL9A3-211ENST00000477612 ANO4Q32M45 955 aa22.79■■□□□ 1.24
COL9A3-211ENST00000477612 BSPRYQ5W0U4 402 aa22.79■■□□□ 1.24
COL9A3-211ENST00000477612 LAIR1Q6GTX8 287 aa22.79■■□□□ 1.24
COL9A3-211ENST00000477612 GPR161Q8N6U8 529 aaKnown RBP22.79■■□□□ 1.24
COL9A3-211ENST00000477612 NAT16Q8N8M0 369 aa22.79■■□□□ 1.24
COL9A3-211ENST00000477612 IRGQQ8WZA9 623 aa22.79■■□□□ 1.24
COL9A3-211ENST00000477612 IPO9Q96P70 1041 aaKnown RBP22.79■■□□□ 1.24
COL9A3-211ENST00000477612 CRACR2AQ9BSW2 395 aa22.79■■□□□ 1.24
COL9A3-211ENST00000477612 ABCC13Q9NSE7 274 aa22.79■■□□□ 1.24
COL9A3-211ENST00000477612 MARCH2Q9P0N8 246 aa22.79■■□□□ 1.24
COL9A3-211ENST00000477612 NCDNQ9UBB6 729 aa22.79■■□□□ 1.24
COL9A3-211ENST00000477612 FBXO10Q9UK96 956 aa22.79■■□□□ 1.24
COL9A3-211ENST00000477612 STRIP2Q9ULQ0 834 aa22.79■■□□□ 1.24
COL9A3-211ENST00000477612 STARD13Q9Y3M8 1113 aa22.79■■□□□ 1.24
COL9A3-211ENST00000477612 DMXL1Q9Y485 3027 aa22.78■■□□□ 1.24
COL9A3-211ENST00000477612 YJEFN3A6XGL0 299 aa22.78■■□□□ 1.24
COL9A3-211ENST00000477612 E7ENQ6 273 aa22.78■■□□□ 1.24
COL9A3-211ENST00000477612 PRKCSHP14314 528 aaPredicted RBP22.78■■□□□ 1.24
COL9A3-211ENST00000477612 GPD2P43304 727 aa22.78■■□□□ 1.24
COL9A3-211ENST00000477612 MFAP3P55082 362 aa22.78■■□□□ 1.24
COL9A3-211ENST00000477612 SRSF5Q13243 272 aaKnown RBP22.78■■□□□ 1.24
COL9A3-211ENST00000477612 MAN2A1Q16706 1144 aa22.78■■□□□ 1.24
COL9A3-211ENST00000477612 TPD52L1Q16890 204 aaPredicted RBP22.78■■□□□ 1.24
COL9A3-211ENST00000477612 EXOC3L4Q17RC7 722 aa22.78■■□□□ 1.24
COL9A3-211ENST00000477612 C2orf27AQ580R0 203 aa22.78■■□□□ 1.24
COL9A3-211ENST00000477612 RBM43Q6ZSC3 357 aaKnown RBP22.78■■□□□ 1.24
COL9A3-211ENST00000477612 CREBRFQ8IUR6 639 aa22.78■■□□□ 1.24
COL9A3-211ENST00000477612 FAM114A1Q8IWE2 563 aa22.78■■□□□ 1.24
COL9A3-211ENST00000477612 SFTPA1Q8IWL2 248 aa22.78■■□□□ 1.24
COL9A3-211ENST00000477612 SIX6OS1Q8N1H7 587 aa22.78■■□□□ 1.24
COL9A3-211ENST00000477612 GAB3Q8WWW8 586 aa22.78■■□□□ 1.24
COL9A3-211ENST00000477612 GBP4Q96PP9 640 aa22.78■■□□□ 1.24
COL9A3-211ENST00000477612 XPO6Q96QU8 1125 aaKnown RBP22.78■■□□□ 1.24
COL9A3-211ENST00000477612 APEX2Q9UBZ4 518 aa22.78■■□□□ 1.24
COL9A3-211ENST00000477612 RAB23Q9ULC3 237 aa22.78■■□□□ 1.24
COL9A3-211ENST00000477612 M0QYV0 167 aa22.77■■□□□ 1.24
COL9A3-211ENST00000477612 APBB3O95704 486 aa22.77■■□□□ 1.24
COL9A3-211ENST00000477612 CALCAP01258 141 aa22.77■■□□□ 1.24
COL9A3-211ENST00000477612 TYRP14679 529 aa22.77■■□□□ 1.24
COL9A3-211ENST00000477612 TGM1P22735 817 aa22.77■■□□□ 1.24
COL9A3-211ENST00000477612 PON1P27169 355 aa22.77■■□□□ 1.24
COL9A3-211ENST00000477612 CHKAP35790 457 aa22.77■■□□□ 1.24
COL9A3-211ENST00000477612 MTIF2P46199 727 aaKnown RBP22.77■■□□□ 1.24
COL9A3-211ENST00000477612 SEC13P55735 322 aa22.77■■□□□ 1.24
COL9A3-211ENST00000477612 TRIP4Q15650 581 aaPredicted RBP22.77■■□□□ 1.24
COL9A3-211ENST00000477612 CRY1Q16526 586 aa22.77■■□□□ 1.24
COL9A3-211ENST00000477612 NUDT18Q6ZVK8 323 aa22.77■■□□□ 1.24
COL9A3-211ENST00000477612 RSRC2Q7L4I2 434 aaKnown RBP22.77■■□□□ 1.24
COL9A3-211ENST00000477612 RASSF3Q86WH2 238 aa22.77■■□□□ 1.24
COL9A3-211ENST00000477612 FAM217AQ8IXS0 508 aa22.77■■□□□ 1.24
COL9A3-211ENST00000477612 TERB1Q8NA31 727 aa22.77■■□□□ 1.24
COL9A3-211ENST00000477612 IL17RCQ8NAC3 791 aa22.77■■□□□ 1.24
COL9A3-211ENST00000477612 PLD4Q96BZ4 506 aa22.77■■□□□ 1.24
COL9A3-211ENST00000477612 HHIPQ96QV1 700 aa22.77■■□□□ 1.24
COL9A3-211ENST00000477612 BBS2Q9BXC9 721 aa22.77■■□□□ 1.24
COL9A3-211ENST00000477612 HBS1LQ9Y450 684 aaKnown RBP22.77■■□□□ 1.24
COL9A3-211ENST00000477612 SLC12A8A0AV02 714 aa22.76■■□□□ 1.23
COL9A3-211ENST00000477612 AXIN1O15169 862 aa22.76■■□□□ 1.23
COL9A3-211ENST00000477612 RETP07949 1114 aa22.76■■□□□ 1.23
COL9A3-211ENST00000477612 LCP1P13796 627 aa22.76■■□□□ 1.23
COL9A3-211ENST00000477612 PXNP49023 591 aaPredicted RBP22.76■■□□□ 1.23
COL9A3-211ENST00000477612 RGS7P49802 495 aa22.76■■□□□ 1.23
COL9A3-211ENST00000477612 KDSRQ06136 332 aa22.76■■□□□ 1.23
COL9A3-211ENST00000477612 EMC10Q5UCC4 262 aa22.76■■□□□ 1.23
COL9A3-211ENST00000477612 MSANTD2Q6P1R3 559 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms