RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 PLEKHA4Q9H4M7 779 aa18.87■□□□□ 0.61
ATG4B-217ENST00000475693 ANLNQ9NQW6 1124 aa18.87■□□□□ 0.61
ATG4B-217ENST00000475693 PIGVQ9NUD9 493 aa18.87■□□□□ 0.61
ATG4B-217ENST00000475693 YIPF1Q9Y548 306 aa18.87■□□□□ 0.61
ATG4B-217ENST00000475693 PCDHA11Q9Y5I1 949 aa18.87■□□□□ 0.61
ATG4B-217ENST00000475693 MSI1O43347 362 aaKnown RBP18.86■□□□□ 0.61
ATG4B-217ENST00000475693 TRUB2O95900 331 aaKnown RBP18.86■□□□□ 0.61
ATG4B-217ENST00000475693 FGGP02679 453 aa18.86■□□□□ 0.61
ATG4B-217ENST00000475693 RARAP10276 462 aa18.86■□□□□ 0.61
ATG4B-217ENST00000475693 KRT10P13645 584 aa18.86■□□□□ 0.61
ATG4B-217ENST00000475693 YWHAQP27348 245 aa18.86■□□□□ 0.61
ATG4B-217ENST00000475693 RWDD2BP57060 319 aa18.86■□□□□ 0.61
ATG4B-217ENST00000475693 C2orf54Q08AI8 447 aa18.86■□□□□ 0.61
ATG4B-217ENST00000475693 FBXO32Q969P5 355 aa18.86■□□□□ 0.61
ATG4B-217ENST00000475693 CALR3Q96L12 384 aaKnown RBP18.86■□□□□ 0.61
ATG4B-217ENST00000475693 OXCT2Q9BYC2 517 aaPredicted RBP18.86■□□□□ 0.61
ATG4B-217ENST00000475693 ZNF638Q14966 1978 aaKnown RBP18.86■□□□□ 0.61
ATG4B-217ENST00000475693 PATJQ8NI35 1801 aa18.86■□□□□ 0.61
ATG4B-217ENST00000475693 DOCK6Q96HP0 2047 aa18.86■□□□□ 0.61
ATG4B-217ENST00000475693 MIF4GDA9UHW6 222 aaKnown RBP18.86■□□□□ 0.61
ATG4B-217ENST00000475693 I6L893 689 aaPredicted RBP18.86■□□□□ 0.61
ATG4B-217ENST00000475693 DPYSL4O14531 572 aa18.86■□□□□ 0.61
ATG4B-217ENST00000475693 ERLIN1O75477 346 aa18.86■□□□□ 0.61
ATG4B-217ENST00000475693 NOS2P35228 1153 aa18.86■□□□□ 0.61
ATG4B-217ENST00000475693 GPM6BQ13491 265 aa18.86■□□□□ 0.61
ATG4B-217ENST00000475693 SLC25A52Q3SY17 297 aa18.86■□□□□ 0.61
ATG4B-217ENST00000475693 CCDC50Q8IVM0 306 aa18.86■□□□□ 0.61
ATG4B-217ENST00000475693 GDPD5Q8WTR4 605 aa18.86■□□□□ 0.61
ATG4B-217ENST00000475693 NPY6RQ99463 290 aa18.86■□□□□ 0.61
ATG4B-217ENST00000475693 FAM118BQ9BPY3 351 aa18.86■□□□□ 0.61
ATG4B-217ENST00000475693 FNIP2Q9P278 1114 aa18.86■□□□□ 0.61
ATG4B-217ENST00000475693 C5orf67F2Z3F1 127 aa18.85■□□□□ 0.61
ATG4B-217ENST00000475693 POLR3GO15318 223 aaPredicted RBP18.85■□□□□ 0.61
ATG4B-217ENST00000475693 ELF1P32519 619 aa18.85■□□□□ 0.61
ATG4B-217ENST00000475693 TUFMP49411 452 aaKnown RBP18.85■□□□□ 0.61
ATG4B-217ENST00000475693 SMARCB1Q12824 385 aa18.85■□□□□ 0.61
ATG4B-217ENST00000475693 BTBD8Q5XKL5 378 aa18.85■□□□□ 0.61
ATG4B-217ENST00000475693 TPGS2Q68CL5 300 aa18.85■□□□□ 0.61
ATG4B-217ENST00000475693 MFSD7Q6UXD7 560 aa18.85■□□□□ 0.61
ATG4B-217ENST00000475693 ADGRD2Q7Z7M1 963 aa18.85■□□□□ 0.61
ATG4B-217ENST00000475693 PYROXD2Q8N2H3 581 aa18.85■□□□□ 0.61
ATG4B-217ENST00000475693 NOA1Q8NC60 698 aaKnown RBP18.85■□□□□ 0.61
ATG4B-217ENST00000475693 C2orf15Q8WU43 125 aaKnown RBP18.85■□□□□ 0.61
ATG4B-217ENST00000475693 SLC22A17Q8WUG5 538 aa18.85■□□□□ 0.61
ATG4B-217ENST00000475693 CENPIQ92674 756 aaPredicted RBP18.85■□□□□ 0.61
ATG4B-217ENST00000475693 CASP10Q92851 521 aa18.85■□□□□ 0.61
ATG4B-217ENST00000475693 PLVAPQ9BX97 442 aa18.85■□□□□ 0.61
ATG4B-217ENST00000475693 SCML2Q9UQR0 700 aa18.85■□□□□ 0.61
ATG4B-217ENST00000475693 MYO16Q9Y6X6 1858 aa18.85■□□□□ 0.61
ATG4B-217ENST00000475693 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.85■□□□□ 0.61
ATG4B-217ENST00000475693 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.85■□□□□ 0.61
ATG4B-217ENST00000475693 NRG2O14511 850 aaPredicted RBP18.85■□□□□ 0.61
ATG4B-217ENST00000475693 KRT1P04264 644 aa18.85■□□□□ 0.61
ATG4B-217ENST00000475693 HMGA1P17096 107 aaKnown RBP18.85■□□□□ 0.61
ATG4B-217ENST00000475693 SCNN1AP37088 669 aa18.85■□□□□ 0.61
ATG4B-217ENST00000475693 PTPN9P43378 593 aa18.85■□□□□ 0.61
ATG4B-217ENST00000475693 ERVK-21P61565 698 aa18.85■□□□□ 0.61
ATG4B-217ENST00000475693 RPL10AP62906 217 aaKnown RBP18.85■□□□□ 0.61
ATG4B-217ENST00000475693 MMRN1Q13201 1228 aa18.85■□□□□ 0.61
ATG4B-217ENST00000475693 WHAMMP3Q1A5X7 153 aa18.85■□□□□ 0.61
ATG4B-217ENST00000475693 CCDC181Q5TID7 509 aa18.85■□□□□ 0.61
ATG4B-217ENST00000475693 PPP2R2DQ66LE6 453 aa18.85■□□□□ 0.61
ATG4B-217ENST00000475693 KAZNQ674X7 775 aa18.85■□□□□ 0.61
ATG4B-217ENST00000475693 TAC4Q86UU9 113 aa18.85■□□□□ 0.61
ATG4B-217ENST00000475693 NT5C3BQ969T7 300 aa18.85■□□□□ 0.61
ATG4B-217ENST00000475693 DDIT4Q9NX09 232 aa18.85■□□□□ 0.61
ATG4B-217ENST00000475693 INSL5Q9Y5Q6 135 aa18.85■□□□□ 0.61
ATG4B-217ENST00000475693 GREB1Q4ZG55 1949 aa18.84■□□□□ 0.61
ATG4B-217ENST00000475693 LRRD1A4D1F6 860 aa18.84■□□□□ 0.61
ATG4B-217ENST00000475693 GGCXP38435 758 aa18.84■□□□□ 0.61
ATG4B-217ENST00000475693 ALDH1A3P47895 512 aa18.84■□□□□ 0.61
ATG4B-217ENST00000475693 PLD1Q13393 1074 aa18.84■□□□□ 0.61
ATG4B-217ENST00000475693 BEND6Q5SZJ8 279 aaPredicted RBP18.84■□□□□ 0.61
ATG4B-217ENST00000475693 FAM182AQ5T1J6 154 aa18.84■□□□□ 0.61
ATG4B-217ENST00000475693 LILRA6Q6PI73 481 aa18.84■□□□□ 0.61
ATG4B-217ENST00000475693 HDXQ7Z353 690 aa18.84■□□□□ 0.61
ATG4B-217ENST00000475693 DQX1Q8TE96 717 aaKnown RBP18.84■□□□□ 0.61
ATG4B-217ENST00000475693 PBKQ96KB5 322 aa18.84■□□□□ 0.61
ATG4B-217ENST00000475693 SPATA17Q96L03 361 aa18.84■□□□□ 0.61
ATG4B-217ENST00000475693 CCSER2Q9H7U1 834 aa18.84■□□□□ 0.61
ATG4B-217ENST00000475693 ANKZF1Q9H8Y5 726 aa18.84■□□□□ 0.61
ATG4B-217ENST00000475693 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.84■□□□□ 0.61
ATG4B-217ENST00000475693 IL37Q9NZH6 218 aa18.84■□□□□ 0.61
ATG4B-217ENST00000475693 SNX10Q9Y5X0 201 aa18.84■□□□□ 0.61
ATG4B-217ENST00000475693 PLXNA3P51805 1871 aa18.84■□□□□ 0.61
ATG4B-217ENST00000475693 PSTPIP1O43586 416 aa18.84■□□□□ 0.61
ATG4B-217ENST00000475693 PRPSAP2O60256 369 aa18.84■□□□□ 0.61
ATG4B-217ENST00000475693 RFPL2O75678 378 aa18.84■□□□□ 0.61
ATG4B-217ENST00000475693 ZNF697Q5TEC3 545 aa18.84■□□□□ 0.61
ATG4B-217ENST00000475693 CHRDL2Q6WN34 429 aa18.84■□□□□ 0.61
ATG4B-217ENST00000475693 IRGQQ8WZA9 623 aa18.84■□□□□ 0.61
ATG4B-217ENST00000475693 CARD9Q9H257 536 aa18.84■□□□□ 0.61
ATG4B-217ENST00000475693 RBM12Q9NTZ6 932 aaKnown RBP18.84■□□□□ 0.61
ATG4B-217ENST00000475693 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.84■□□□□ 0.61
ATG4B-217ENST00000475693 GLI1P08151 1106 aa18.83■□□□□ 0.6
ATG4B-217ENST00000475693 RALAP11233 206 aa18.83■□□□□ 0.6
ATG4B-217ENST00000475693 EPCAMP16422 314 aa18.83■□□□□ 0.6
ATG4B-217ENST00000475693 DEUP1Q05D60 604 aa18.83■□□□□ 0.6
ATG4B-217ENST00000475693 ARCQ7LC44 396 aa18.83■□□□□ 0.6
ATG4B-217ENST00000475693 DNAJB7Q7Z6W7 309 aaPredicted RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms