RNA–Protein interactions for RNA: ENST00000473270.1

APTX-218, Transcript of aprataxin, humanhuman

TSL 2

Gene APTX, Length 645 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-218ENST00000473270 SLC5A3P53794 718 aa20.6■□□□□ 0.89
APTX-218ENST00000473270 MCCD1P59942 119 aaPredicted RBP20.6■□□□□ 0.89
APTX-218ENST00000473270 DLG4P78352 724 aa20.6■□□□□ 0.89
APTX-218ENST00000473270 LYSMD4Q5XG99 296 aa20.6■□□□□ 0.89
APTX-218ENST00000473270 TMEM92Q6UXU6 159 aa20.6■□□□□ 0.89
APTX-218ENST00000473270 SLC36A4Q6YBV0 504 aa20.6■□□□□ 0.89
APTX-218ENST00000473270 ARMCX6Q7L4S7 300 aa20.6■□□□□ 0.89
APTX-218ENST00000473270 TMEFF1Q8IYR6 380 aa20.6■□□□□ 0.89
APTX-218ENST00000473270 RLN3Q8WXF3 142 aa20.6■□□□□ 0.89
APTX-218ENST00000473270 KCNK16Q96T55 309 aa20.6■□□□□ 0.89
APTX-218ENST00000473270 IMPG2Q9BZV3 1241 aa20.6■□□□□ 0.89
APTX-218ENST00000473270 SMYD3Q9H7B4 428 aa20.6■□□□□ 0.89
APTX-218ENST00000473270 SPHK2Q9NRA0 654 aa20.6■□□□□ 0.89
APTX-218ENST00000473270 KRT82Q9NSB4 513 aa20.6■□□□□ 0.89
APTX-218ENST00000473270 SAMSN1Q9NSI8 373 aaKnown RBP20.6■□□□□ 0.89
APTX-218ENST00000473270 EVLQ9UI08 416 aaPredicted RBP20.6■□□□□ 0.89
APTX-218ENST00000473270 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.6■□□□□ 0.89
APTX-218ENST00000473270 CHD8Q9HCK8 2581 aa20.6■□□□□ 0.89
APTX-218ENST00000473270 CNOT1A5YKK6 2376 aaKnown RBP20.59■□□□□ 0.89
APTX-218ENST00000473270 A0A0A0MRY4 1105 aa20.59■□□□□ 0.89
APTX-218ENST00000473270 GOLGA6L19H0YKK7 550 aa20.59■□□□□ 0.89
APTX-218ENST00000473270 CFIP05156 583 aa20.59■□□□□ 0.89
APTX-218ENST00000473270 TPM2P07951 284 aa20.59■□□□□ 0.89
APTX-218ENST00000473270 TRIM49P0CI25 452 aa20.59■□□□□ 0.89
APTX-218ENST00000473270 TRIM49CP0CI26 452 aa20.59■□□□□ 0.89
APTX-218ENST00000473270 CDK11BP21127 795 aaKnown RBP20.59■□□□□ 0.89
APTX-218ENST00000473270 CSRP1P21291 193 aaKnown RBP20.59■□□□□ 0.89
APTX-218ENST00000473270 EEF1GP26641 437 aaKnown RBP20.59■□□□□ 0.89
APTX-218ENST00000473270 CACNA2D1P54289 1103 aa20.59■□□□□ 0.89
APTX-218ENST00000473270 CDH8P55286 799 aa20.59■□□□□ 0.89
APTX-218ENST00000473270 IRX4P78413 519 aa20.59■□□□□ 0.89
APTX-218ENST00000473270 SGSM1Q2NKQ1 1148 aa20.59■□□□□ 0.89
APTX-218ENST00000473270 C10orf76Q5T2E6 689 aa20.59■□□□□ 0.89
APTX-218ENST00000473270 HDDC3Q8N4P3 179 aa20.59■□□□□ 0.89
APTX-218ENST00000473270 SCAMP5Q8TAC9 235 aa20.59■□□□□ 0.89
APTX-218ENST00000473270 OLIG1Q8TAK6 271 aa20.59■□□□□ 0.89
APTX-218ENST00000473270 CEP76Q8TAP6 659 aa20.59■□□□□ 0.89
APTX-218ENST00000473270 MMRN2Q9H8L6 949 aa20.59■□□□□ 0.89
APTX-218ENST00000473270 VRTNQ9H8Y1 702 aa20.59■□□□□ 0.89
APTX-218ENST00000473270 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.59■□□□□ 0.89
APTX-218ENST00000473270 FANCLQ9NW38 375 aa20.59■□□□□ 0.89
APTX-218ENST00000473270 KMT2BQ9UMN6 2715 aaPredicted RBP20.59■□□□□ 0.89
APTX-218ENST00000473270 EML5Q05BV3 1969 aa20.58■□□□□ 0.89
APTX-218ENST00000473270 PATE3B3GLJ2 98 aa20.58■□□□□ 0.89
APTX-218ENST00000473270 KCNJ18B7U540 433 aa20.58■□□□□ 0.89
APTX-218ENST00000473270 HOXD12P35452 270 aa20.58■□□□□ 0.89
APTX-218ENST00000473270 MAPK8P45983 427 aa20.58■□□□□ 0.89
APTX-218ENST00000473270 RPL6Q02878 288 aaKnown RBP20.58■□□□□ 0.89
APTX-218ENST00000473270 KCNJ12Q14500 433 aa20.58■□□□□ 0.89
APTX-218ENST00000473270 GAB4Q2WGN9 574 aa20.58■□□□□ 0.89
APTX-218ENST00000473270 EMC10Q5UCC4 262 aa20.58■□□□□ 0.89
APTX-218ENST00000473270 SNX30Q5VWJ9 437 aa20.58■□□□□ 0.89
APTX-218ENST00000473270 GRAMD4Q6IC98 578 aa20.58■□□□□ 0.89
APTX-218ENST00000473270 ACOT1Q86TX2 421 aa20.58■□□□□ 0.89
APTX-218ENST00000473270 IRF2BP1Q8IU81 584 aa20.58■□□□□ 0.89
APTX-218ENST00000473270 TRIM59Q8IWR1 403 aa20.58■□□□□ 0.89
APTX-218ENST00000473270 ZNF516Q92618 1163 aa20.58■□□□□ 0.89
APTX-218ENST00000473270 XYLT2Q9H1B5 865 aa20.58■□□□□ 0.89
APTX-218ENST00000473270 CCSER2Q9H7U1 834 aa20.58■□□□□ 0.89
APTX-218ENST00000473270 CBX8Q9HC52 389 aa20.58■□□□□ 0.89
APTX-218ENST00000473270 TMEM8AQ9HCN3 771 aa20.58■□□□□ 0.89
APTX-218ENST00000473270 GMIPQ9P107 970 aa20.58■□□□□ 0.89
APTX-218ENST00000473270 WDR35Q9P2L0 1181 aa20.58■□□□□ 0.89
APTX-218ENST00000473270 HOXC11O43248 304 aaPredicted RBP20.57■□□□□ 0.88
APTX-218ENST00000473270 TLR5O60602 858 aa20.57■□□□□ 0.88
APTX-218ENST00000473270 TULP3O75386 442 aa20.57■□□□□ 0.88
APTX-218ENST00000473270 C4BPAP04003 597 aaKnown RBP20.57■□□□□ 0.88
APTX-218ENST00000473270 PROS1P07225 676 aa20.57■□□□□ 0.88
APTX-218ENST00000473270 HOXB2P14652 356 aa20.57■□□□□ 0.88
APTX-218ENST00000473270 KIR2DL1P43626 348 aaPredicted RBP20.57■□□□□ 0.88
APTX-218ENST00000473270 GCLMP48507 274 aa20.57■□□□□ 0.88
APTX-218ENST00000473270 GFPT1Q06210 699 aaPredicted RBP20.57■□□□□ 0.88
APTX-218ENST00000473270 CETN1Q12798 172 aa20.57■□□□□ 0.88
APTX-218ENST00000473270 HSP90AA4PQ58FG1 418 aa20.57■□□□□ 0.88
APTX-218ENST00000473270 KRT39Q6A163 491 aa20.57■□□□□ 0.88
APTX-218ENST00000473270 SV2AQ7L0J3 742 aa20.57■□□□□ 0.88
APTX-218ENST00000473270 TADA2BQ86TJ2 420 aa20.57■□□□□ 0.88
APTX-218ENST00000473270 C12orf40Q86WS4 652 aa20.57■□□□□ 0.88
APTX-218ENST00000473270 DHX40Q8IX18 779 aaKnown RBP20.57■□□□□ 0.88
APTX-218ENST00000473270 CCDC150Q8NCX0 1101 aa20.57■□□□□ 0.88
APTX-218ENST00000473270 TAF4BQ92750 862 aa20.57■□□□□ 0.88
APTX-218ENST00000473270 SLC35C1Q96A29 364 aa20.57■□□□□ 0.88
APTX-218ENST00000473270 DNAJC17Q9NVM6 304 aaKnown RBP20.57■□□□□ 0.88
APTX-218ENST00000473270 THADAQ6YHU6 1953 aa20.56■□□□□ 0.88
APTX-218ENST00000473270 ZNF217O75362 1048 aa20.56■□□□□ 0.88
APTX-218ENST00000473270 AFPP02771 609 aaKnown RBP20.56■□□□□ 0.88
APTX-218ENST00000473270 FAM200BP0CF97 657 aa20.56■□□□□ 0.88
APTX-218ENST00000473270 NTSR1P30989 418 aa20.56■□□□□ 0.88
APTX-218ENST00000473270 ATP5C1P36542 298 aaKnown RBP20.56■□□□□ 0.88
APTX-218ENST00000473270 MXI1P50539 228 aa20.56■□□□□ 0.88
APTX-218ENST00000473270 MAP3K7CLP57077 242 aa20.56■□□□□ 0.88
APTX-218ENST00000473270 PPP3CAQ08209 521 aa20.56■□□□□ 0.88
APTX-218ENST00000473270 NCAPHQ15003 741 aa20.56■□□□□ 0.88
APTX-218ENST00000473270 IQCB1Q15051 598 aa20.56■□□□□ 0.88
APTX-218ENST00000473270 MAN2A1Q16706 1144 aa20.56■□□□□ 0.88
APTX-218ENST00000473270 DUOXA1Q1HG43 343 aa20.56■□□□□ 0.88
APTX-218ENST00000473270 ZACNQ401N2 412 aa20.56■□□□□ 0.88
APTX-218ENST00000473270 TCP11X2Q5H9J9 407 aa20.56■□□□□ 0.88
APTX-218ENST00000473270 C1orf220Q5T0J3 134 aa20.56■□□□□ 0.88
APTX-218ENST00000473270 CDKAL1Q5VV42 579 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms