RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 MAPTP10636 758 aaKnown RBP10.89□□□□□ -0.67
CDHR3-209ENST00000472116 TYRP14679 529 aa10.89□□□□□ -0.67
CDHR3-209ENST00000472116 CKMT2P17540 419 aa10.89□□□□□ -0.67
CDHR3-209ENST00000472116 CD27P26842 260 aa10.89□□□□□ -0.67
CDHR3-209ENST00000472116 MCM7P33993 719 aa10.89□□□□□ -0.67
CDHR3-209ENST00000472116 LHX1P48742 406 aa10.89□□□□□ -0.67
CDHR3-209ENST00000472116 CDH8P55286 799 aa10.89□□□□□ -0.67
CDHR3-209ENST00000472116 NFKB2Q00653 900 aa10.89□□□□□ -0.67
CDHR3-209ENST00000472116 INSM1Q01101 510 aaPredicted RBP10.89□□□□□ -0.67
CDHR3-209ENST00000472116 TLE1Q04724 770 aa10.89□□□□□ -0.67
CDHR3-209ENST00000472116 GRIN1Q05586 938 aa10.89□□□□□ -0.67
CDHR3-209ENST00000472116 IFRD2Q12894 506 aaPredicted RBP10.89□□□□□ -0.67
CDHR3-209ENST00000472116 MAPRE1Q15691 268 aaKnown RBP10.89□□□□□ -0.67
CDHR3-209ENST00000472116 TDRD10Q5VZ19 366 aaKnown RBP10.89□□□□□ -0.67
CDHR3-209ENST00000472116 BBS7Q8IWZ6 715 aa10.89□□□□□ -0.67
CDHR3-209ENST00000472116 DAW1Q8N136 415 aa10.89□□□□□ -0.67
CDHR3-209ENST00000472116 PDCL2Q8N4E4 241 aa10.89□□□□□ -0.67
CDHR3-209ENST00000472116 NSUN7Q8NE18 718 aaKnown RBP10.89□□□□□ -0.67
CDHR3-209ENST00000472116 ZNF274Q96GC6 653 aaPredicted RBP10.89□□□□□ -0.67
CDHR3-209ENST00000472116 VCPIP1Q96JH7 1222 aa10.89□□□□□ -0.67
CDHR3-209ENST00000472116 NTPCRQ9BSD7 190 aaKnown RBP10.89□□□□□ -0.67
CDHR3-209ENST00000472116 TMEM60Q9H2L4 133 aa10.89□□□□□ -0.67
CDHR3-209ENST00000472116 C6orf106Q9H6K1 298 aaPredicted RBP10.89□□□□□ -0.67
CDHR3-209ENST00000472116 LRRC4CQ9HCJ2 640 aa10.89□□□□□ -0.67
CDHR3-209ENST00000472116 STARD5Q9NSY2 213 aa10.89□□□□□ -0.67
CDHR3-209ENST00000472116 GJB4Q9NTQ9 266 aa10.89□□□□□ -0.67
CDHR3-209ENST00000472116 WDR70Q9NW82 654 aa10.89□□□□□ -0.67
CDHR3-209ENST00000472116 PTPRJQ12913 1337 aa10.88□□□□□ -0.67
CDHR3-209ENST00000472116 TDRD6O60522 2096 aaKnown RBP10.88□□□□□ -0.67
CDHR3-209ENST00000472116 SEMA4FO95754 770 aa10.88□□□□□ -0.67
CDHR3-209ENST00000472116 IRF1P10914 325 aa10.88□□□□□ -0.67
CDHR3-209ENST00000472116 PLS3P13797 630 aa10.88□□□□□ -0.67
CDHR3-209ENST00000472116 RBMS1P29558 406 aaKnown RBP10.88□□□□□ -0.67
CDHR3-209ENST00000472116 LSSP48449 732 aa10.88□□□□□ -0.67
CDHR3-209ENST00000472116 HS1BP3Q53T59 392 aa10.88□□□□□ -0.67
CDHR3-209ENST00000472116 CCDC83Q8IWF9 413 aa10.88□□□□□ -0.67
CDHR3-209ENST00000472116 TMEM161BQ8NDZ6 487 aa10.88□□□□□ -0.67
CDHR3-209ENST00000472116 PDZD8Q8NEN9 1154 aa10.88□□□□□ -0.67
CDHR3-209ENST00000472116 BOD1L1Q8NFC6 3051 aa10.88□□□□□ -0.67
CDHR3-209ENST00000472116 BIRC7Q96CA5 298 aa10.88□□□□□ -0.67
CDHR3-209ENST00000472116 DEPDC7Q96QD5 511 aa10.88□□□□□ -0.67
CDHR3-209ENST00000472116 TTLL2Q9BWV7 592 aa10.88□□□□□ -0.67
CDHR3-209ENST00000472116 HAPLN2Q9GZV7 340 aa10.88□□□□□ -0.67
CDHR3-209ENST00000472116 BTBD1Q9H0C5 482 aa10.88□□□□□ -0.67
CDHR3-209ENST00000472116 POLR1BQ9H9Y6 1135 aa10.88□□□□□ -0.67
CDHR3-209ENST00000472116 R3HCC1Q9Y3T6 440 aaKnown RBP10.88□□□□□ -0.67
CDHR3-209ENST00000472116 VILLO15195 856 aa10.87□□□□□ -0.67
CDHR3-209ENST00000472116 USP12O75317 370 aa10.87□□□□□ -0.67
CDHR3-209ENST00000472116 BDNFP23560 247 aa10.87□□□□□ -0.67
CDHR3-209ENST00000472116 USP46P62068 366 aa10.87□□□□□ -0.67
CDHR3-209ENST00000472116 RACK1P63244 317 aaKnown RBP10.87□□□□□ -0.67
CDHR3-209ENST00000472116 NOP14P78316 857 aaKnown RBP10.87□□□□□ -0.67
CDHR3-209ENST00000472116 ASIC1P78348 528 aa10.87□□□□□ -0.67
CDHR3-209ENST00000472116 DAB2P98082 770 aa10.87□□□□□ -0.67
CDHR3-209ENST00000472116 CYP27A1Q02318 531 aa10.87□□□□□ -0.67
CDHR3-209ENST00000472116 ARID5AQ03989 594 aa10.87□□□□□ -0.67
CDHR3-209ENST00000472116 GOLGA8FQ08AF8 430 aa10.87□□□□□ -0.67
CDHR3-209ENST00000472116 GOLGA8DPQ0D2H9 430 aa10.87□□□□□ -0.67
CDHR3-209ENST00000472116 TAF10Q12962 218 aa10.87□□□□□ -0.67
CDHR3-209ENST00000472116 MMRN1Q13201 1228 aa10.87□□□□□ -0.67
CDHR3-209ENST00000472116 ZSCAN23Q3MJ62 389 aa10.87□□□□□ -0.67
CDHR3-209ENST00000472116 PRAMEF14Q5SWL7 426 aa10.87□□□□□ -0.67
CDHR3-209ENST00000472116 TPGS1Q6ZTW0 290 aa10.87□□□□□ -0.67
CDHR3-209ENST00000472116 SPNS2Q8IVW8 549 aa10.87□□□□□ -0.67
CDHR3-209ENST00000472116 OXR1Q8N573 874 aa10.87□□□□□ -0.67
CDHR3-209ENST00000472116 EXD3Q8N9H8 876 aa10.87□□□□□ -0.67
CDHR3-209ENST00000472116 SAP25Q8TEE9 199 aa10.87□□□□□ -0.67
CDHR3-209ENST00000472116 MARVELD3Q96A59 401 aa10.87□□□□□ -0.67
CDHR3-209ENST00000472116 DUSP9Q99956 384 aaKnown RBP10.87□□□□□ -0.67
CDHR3-209ENST00000472116 RAB34Q9BZG1 259 aa10.87□□□□□ -0.67
CDHR3-209ENST00000472116 TRIM9Q9C026 710 aa10.87□□□□□ -0.67
CDHR3-209ENST00000472116 LHX5Q9H2C1 402 aa10.87□□□□□ -0.67
CDHR3-209ENST00000472116 GDF3Q9NR23 364 aa10.87□□□□□ -0.67
CDHR3-209ENST00000472116 LSM7Q9UK45 103 aaKnown RBP10.87□□□□□ -0.67
CDHR3-209ENST00000472116 CPSF3Q9UKF6 684 aaKnown RBP10.87□□□□□ -0.67
CDHR3-209ENST00000472116 L1RE1Q9UN81 338 aa10.87□□□□□ -0.67
CDHR3-209ENST00000472116 PCDHB1Q9Y5F3 818 aa10.87□□□□□ -0.67
CDHR3-209ENST00000472116 SNX14Q9Y5W7 946 aa10.87□□□□□ -0.67
CDHR3-209ENST00000472116 SLCO1B1Q9Y6L6 691 aa10.87□□□□□ -0.67
CDHR3-209ENST00000472116 PPFIA2O75334 1257 aa10.86□□□□□ -0.67
CDHR3-209ENST00000472116 ACP1P24666 158 aa10.86□□□□□ -0.67
CDHR3-209ENST00000472116 EPHA8P29322 1005 aaPredicted RBP10.86□□□□□ -0.67
CDHR3-209ENST00000472116 ACSL1P33121 698 aa10.86□□□□□ -0.67
CDHR3-209ENST00000472116 ST3GAL1Q11201 340 aa10.86□□□□□ -0.67
CDHR3-209ENST00000472116 MAPK7Q13164 816 aa10.86□□□□□ -0.67
CDHR3-209ENST00000472116 TRIM29Q14134 588 aa10.86□□□□□ -0.67
CDHR3-209ENST00000472116 TTC31Q49AM3 519 aaPredicted RBP10.86□□□□□ -0.67
CDHR3-209ENST00000472116 KCNT1Q5JUK3 1230 aa10.86□□□□□ -0.67
CDHR3-209ENST00000472116 HECTD3Q5T447 861 aa10.86□□□□□ -0.67
CDHR3-209ENST00000472116 RINT1Q6NUQ1 792 aa10.86□□□□□ -0.67
CDHR3-209ENST00000472116 USP53Q70EK8 1073 aa10.86□□□□□ -0.67
CDHR3-209ENST00000472116 NT5DC4Q86YG4 428 aa10.86□□□□□ -0.67
CDHR3-209ENST00000472116 ADGRF2Q8IZF7 708 aa10.86□□□□□ -0.67
CDHR3-209ENST00000472116 SNX29Q8TEQ0 813 aa10.86□□□□□ -0.67
CDHR3-209ENST00000472116 TNFRSF25Q93038 417 aa10.86□□□□□ -0.67
CDHR3-209ENST00000472116 MYLPFQ96A32 169 aa10.86□□□□□ -0.67
CDHR3-209ENST00000472116 LIN37Q96GY3 246 aaPredicted RBP10.86□□□□□ -0.67
CDHR3-209ENST00000472116 PKMYT1Q99640 499 aa10.86□□□□□ -0.67
CDHR3-209ENST00000472116 SYT15Q9BQS2 421 aa10.86□□□□□ -0.67
CDHR3-209ENST00000472116 RUSC1Q9BVN2 902 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms