RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 CCKARP32238 428 aa5.6□□□□□ -1.51
CD46-213ENST00000471987 CARSP49589 748 aaKnown RBP5.6□□□□□ -1.51
CD46-213ENST00000471987 RGS19P49795 217 aa5.6□□□□□ -1.51
CD46-213ENST00000471987 STIM1Q13586 685 aa5.6□□□□□ -1.51
CD46-213ENST00000471987 PPP2R5AQ15172 486 aa5.6□□□□□ -1.51
CD46-213ENST00000471987 NFE2Q16621 373 aaPredicted RBP5.6□□□□□ -1.51
CD46-213ENST00000471987 FAM110CQ1W6H9 321 aa5.6□□□□□ -1.51
CD46-213ENST00000471987 LEXMQ3ZCV2 418 aa5.6□□□□□ -1.51
CD46-213ENST00000471987 KLHL22Q53GT1 634 aa5.6□□□□□ -1.51
CD46-213ENST00000471987 RUSC1-AS1Q66K80 236 aa5.6□□□□□ -1.51
CD46-213ENST00000471987 DARS2Q6PI48 645 aaKnown RBP5.6□□□□□ -1.51
CD46-213ENST00000471987 CCDC149Q6ZUS6 474 aa5.6□□□□□ -1.51
CD46-213ENST00000471987 UNC13DQ70J99 1090 aa5.6□□□□□ -1.51
CD46-213ENST00000471987 PIM3Q86V86 326 aa5.6□□□□□ -1.51
CD46-213ENST00000471987 SESTD1Q86VW0 696 aa5.6□□□□□ -1.51
CD46-213ENST00000471987 RAVER1Q8IY67 606 aaKnown RBP5.6□□□□□ -1.51
CD46-213ENST00000471987 MPLKIPQ8TAP9 179 aa5.6□□□□□ -1.51
CD46-213ENST00000471987 MSLNLQ96KJ4 702 aa5.6□□□□□ -1.51
CD46-213ENST00000471987 CINPQ9BW66 212 aaPredicted RBP5.6□□□□□ -1.51
CD46-213ENST00000471987 VPS51Q9UID3 782 aa5.6□□□□□ -1.51
CD46-213ENST00000471987 ZNF580Q9UK33 172 aa5.6□□□□□ -1.51
CD46-213ENST00000471987 CAPN11Q9UMQ6 739 aa5.6□□□□□ -1.51
CD46-213ENST00000471987 SLC27A6Q9Y2P4 619 aa5.6□□□□□ -1.51
CD46-213ENST00000471987 IGKV2D-30A0A075B6S6 120 aa5.59□□□□□ -1.51
CD46-213ENST00000471987 H3BNX3 289 aa5.59□□□□□ -1.51
CD46-213ENST00000471987 GOLIM4O00461 696 aa5.59□□□□□ -1.51
CD46-213ENST00000471987 HRGP04196 525 aa5.59□□□□□ -1.51
CD46-213ENST00000471987 CD63P08962 238 aa5.59□□□□□ -1.51
CD46-213ENST00000471987 TMEM225BP0DP42 221 aa5.59□□□□□ -1.51
CD46-213ENST00000471987 PSG1P11464 419 aa5.59□□□□□ -1.51
CD46-213ENST00000471987 CCDC15Q0P6D6 951 aa5.59□□□□□ -1.51
CD46-213ENST00000471987 KCNAB1Q14722 419 aa5.59□□□□□ -1.51
CD46-213ENST00000471987 KIAA0753Q2KHM9 967 aa5.59□□□□□ -1.51
CD46-213ENST00000471987 KRTAP5-11Q6L8G4 156 aa5.59□□□□□ -1.51
CD46-213ENST00000471987 PPP4R4Q6NUP7 873 aa5.59□□□□□ -1.51
CD46-213ENST00000471987 SDR16C5Q8N3Y7 309 aa5.59□□□□□ -1.51
CD46-213ENST00000471987 FAM156AQ8NDB6 213 aa5.59□□□□□ -1.51
CD46-213ENST00000471987 ADGRE3Q9BY15 652 aa5.59□□□□□ -1.51
CD46-213ENST00000471987 SQORQ9Y6N5 450 aa5.59□□□□□ -1.51
CD46-213ENST00000471987 SPATA31A1Q5TZJ5 1347 aa5.58□□□□□ -1.52
CD46-213ENST00000471987 INPPL1O15357 1258 aa5.58□□□□□ -1.52
CD46-213ENST00000471987 TULP3O75386 442 aa5.58□□□□□ -1.52
CD46-213ENST00000471987 ZBED1O96006 694 aa5.58□□□□□ -1.52
CD46-213ENST00000471987 CPA2P48052 419 aa5.58□□□□□ -1.52
CD46-213ENST00000471987 COPAP53621 1224 aa5.58□□□□□ -1.52
CD46-213ENST00000471987 FAM193AP78312 1265 aa5.58□□□□□ -1.52
CD46-213ENST00000471987 MANEALQ5VSG8 457 aa5.58□□□□□ -1.52
CD46-213ENST00000471987 FSTL5Q8N475 847 aaPredicted RBP5.58□□□□□ -1.52
CD46-213ENST00000471987 ZNF548Q8NEK5 533 aaPredicted RBP5.58□□□□□ -1.52
CD46-213ENST00000471987 WASF1Q92558 559 aa5.58□□□□□ -1.52
CD46-213ENST00000471987 NUAK2Q9H093 628 aa5.58□□□□□ -1.52
CD46-213ENST00000471987 ARL8BQ9NVJ2 186 aa5.58□□□□□ -1.52
CD46-213ENST00000471987 ZNF212Q9UDV6 495 aa5.58□□□□□ -1.52
CD46-213ENST00000471987 HPSEQ9Y251 543 aa5.58□□□□□ -1.52
CD46-213ENST00000471987 COL15A1P39059 1388 aa5.57□□□□□ -1.52
CD46-213ENST00000471987 CA12O43570 354 aa5.57□□□□□ -1.52
CD46-213ENST00000471987 PRAMEF2O60811 474 aa5.57□□□□□ -1.52
CD46-213ENST00000471987 CRYABP02511 175 aaKnown RBP5.57□□□□□ -1.52
CD46-213ENST00000471987 MT-ND5P03915 603 aa5.57□□□□□ -1.52
CD46-213ENST00000471987 S100BP04271 92 aaPredicted RBP5.57□□□□□ -1.52
CD46-213ENST00000471987 RPL17P18621 184 aaKnown RBP5.57□□□□□ -1.52
CD46-213ENST00000471987 PEX2P28328 305 aa5.57□□□□□ -1.52
CD46-213ENST00000471987 JAK3P52333 1124 aa5.57□□□□□ -1.52
CD46-213ENST00000471987 KPNB1Q14974 876 aaKnown RBP5.57□□□□□ -1.52
CD46-213ENST00000471987 PLEKHG6Q3KR16 790 aa5.57□□□□□ -1.52
CD46-213ENST00000471987 MIDNQ504T8 468 aa5.57□□□□□ -1.52
CD46-213ENST00000471987 C9orf47Q6ZRZ4 202 aa5.57□□□□□ -1.52
CD46-213ENST00000471987 CHST15Q7LFX5 561 aaPredicted RBP5.57□□□□□ -1.52
CD46-213ENST00000471987 P3H2Q8IVL5 708 aa5.57□□□□□ -1.52
CD46-213ENST00000471987 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.57□□□□□ -1.52
CD46-213ENST00000471987 MARK4Q96L34 752 aa5.57□□□□□ -1.52
CD46-213ENST00000471987 BRIP1Q9BX63 1249 aa5.57□□□□□ -1.52
CD46-213ENST00000471987 SEMA5BQ9P283 1151 aa5.57□□□□□ -1.52
CD46-213ENST00000471987 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.57□□□□□ -1.52
CD46-213ENST00000471987 TPP1O14773 563 aa5.56□□□□□ -1.52
CD46-213ENST00000471987 USP12O75317 370 aa5.56□□□□□ -1.52
CD46-213ENST00000471987 GALNSP34059 522 aa5.56□□□□□ -1.52
CD46-213ENST00000471987 MTX1Q13505 466 aa5.56□□□□□ -1.52
CD46-213ENST00000471987 DNASE1L3Q13609 305 aa5.56□□□□□ -1.52
CD46-213ENST00000471987 COLCA1Q6ZS62 124 aa5.56□□□□□ -1.52
CD46-213ENST00000471987 MBD3L2Q8NHZ7 208 aaPredicted RBP5.56□□□□□ -1.52
CD46-213ENST00000471987 IGFBPL1Q8WX77 278 aa5.56□□□□□ -1.52
CD46-213ENST00000471987 SNX22Q96L94 193 aa5.56□□□□□ -1.52
CD46-213ENST00000471987 FAM227BQ96M60 508 aa5.56□□□□□ -1.52
CD46-213ENST00000471987 SELENOOQ9BVL4 669 aa5.56□□□□□ -1.52
CD46-213ENST00000471987 VPS45Q9NRW7 570 aa5.56□□□□□ -1.52
CD46-213ENST00000471987 DDX20Q9UHI6 824 aaKnown RBP5.56□□□□□ -1.52
CD46-213ENST00000471987 EID1Q9Y6B2 187 aa5.56□□□□□ -1.52
CD46-213ENST00000471987 B4DGG1 531 aa5.55□□□□□ -1.52
CD46-213ENST00000471987 WDR47O94967 919 aa5.55□□□□□ -1.52
CD46-213ENST00000471987 TOMM40O96008 361 aa5.55□□□□□ -1.52
CD46-213ENST00000471987 PLAUP00749 431 aa5.55□□□□□ -1.52
CD46-213ENST00000471987 ALPLP05186 524 aa5.55□□□□□ -1.52
CD46-213ENST00000471987 TMIGD3P0DMS9 266 aaPredicted RBP5.55□□□□□ -1.52
CD46-213ENST00000471987 HTR7P34969 479 aa5.55□□□□□ -1.52
CD46-213ENST00000471987 WDR5P61964 334 aaKnown RBP5.55□□□□□ -1.52
CD46-213ENST00000471987 EARS2Q5JPH6 523 aaKnown RBP5.55□□□□□ -1.52
CD46-213ENST00000471987 ZNF793Q6ZN11 406 aa5.55□□□□□ -1.52
CD46-213ENST00000471987 MMP21Q8N119 569 aa5.55□□□□□ -1.52
CD46-213ENST00000471987 BCAS4Q8TDM0 211 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms