RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 B3GALNT2Q8NCR0 500 aa9.67□□□□□ -0.86
CPSF4-211ENST00000471455 SMARCD1Q96GM5 515 aa9.67□□□□□ -0.86
CPSF4-211ENST00000471455 FAM84AQ96KN4 292 aa9.67□□□□□ -0.86
CPSF4-211ENST00000471455 XPO6Q96QU8 1125 aaKnown RBP9.67□□□□□ -0.86
CPSF4-211ENST00000471455 MRPL45Q9BRJ2 306 aaKnown RBP9.67□□□□□ -0.86
CPSF4-211ENST00000471455 MED10Q9BTT4 135 aa9.67□□□□□ -0.86
CPSF4-211ENST00000471455 GTPBP2Q9BX10 602 aaKnown RBP9.67□□□□□ -0.86
CPSF4-211ENST00000471455 ZNF518BQ9C0D4 1074 aa9.67□□□□□ -0.86
CPSF4-211ENST00000471455 RNF38Q9H0F5 515 aa9.67□□□□□ -0.86
CPSF4-211ENST00000471455 DMAP1Q9NPF5 467 aaPredicted RBP9.67□□□□□ -0.86
CPSF4-211ENST00000471455 CGNQ9P2M7 1197 aaKnown RBP9.67□□□□□ -0.86
CPSF4-211ENST00000471455 LSM7Q9UK45 103 aaKnown RBP9.67□□□□□ -0.86
CPSF4-211ENST00000471455 MSRB2Q9Y3D2 182 aa9.67□□□□□ -0.86
CPSF4-211ENST00000471455 ZFHX4Q86UP3 3567 aa9.67□□□□□ -0.86
CPSF4-211ENST00000471455 ATXN2Q99700 1313 aaKnown RBP9.66□□□□□ -0.86
CPSF4-211ENST00000471455 SCAMP3O14828 347 aaKnown RBP9.66□□□□□ -0.86
CPSF4-211ENST00000471455 COCHO43405 550 aa9.66□□□□□ -0.86
CPSF4-211ENST00000471455 ADAM23O75077 832 aa9.66□□□□□ -0.86
CPSF4-211ENST00000471455 PHACTR2O75167 634 aa9.66□□□□□ -0.86
CPSF4-211ENST00000471455 TULP3O75386 442 aa9.66□□□□□ -0.86
CPSF4-211ENST00000471455 P4HA1P13674 534 aa9.66□□□□□ -0.86
CPSF4-211ENST00000471455 HNRNPLP14866 589 aaKnown RBP eCLIP9.66□□□□□ -0.86
CPSF4-211ENST00000471455 GNSP15586 552 aa9.66□□□□□ -0.86
CPSF4-211ENST00000471455 SPINK2P20155 84 aa9.66□□□□□ -0.86
CPSF4-211ENST00000471455 ITPKAP23677 461 aa9.66□□□□□ -0.86
CPSF4-211ENST00000471455 NTSR1P30989 418 aa9.66□□□□□ -0.86
CPSF4-211ENST00000471455 AP3M2P53677 418 aa9.66□□□□□ -0.86
CPSF4-211ENST00000471455 CYP24A1Q07973 514 aa9.66□□□□□ -0.86
CPSF4-211ENST00000471455 SEMA3BQ13214 749 aa9.66□□□□□ -0.86
CPSF4-211ENST00000471455 E2F5Q15329 346 aa9.66□□□□□ -0.86
CPSF4-211ENST00000471455 FAM26FQ5R3K3 315 aa9.66□□□□□ -0.86
CPSF4-211ENST00000471455 SYCP2LQ5T4T6 812 aa9.66□□□□□ -0.86
CPSF4-211ENST00000471455 SNX30Q5VWJ9 437 aa9.66□□□□□ -0.86
CPSF4-211ENST00000471455 PIP4P1Q86T03 277 aa9.66□□□□□ -0.86
CPSF4-211ENST00000471455 C12orf40Q86WS4 652 aa9.66□□□□□ -0.86
CPSF4-211ENST00000471455 ETFBKMTQ8IXQ9 262 aa9.66□□□□□ -0.86
CPSF4-211ENST00000471455 XXYLT1Q8NBI6 393 aa9.66□□□□□ -0.86
CPSF4-211ENST00000471455 GOLGA5Q8TBA6 731 aa9.66□□□□□ -0.86
CPSF4-211ENST00000471455 SCFD1Q8WVM8 642 aa9.66□□□□□ -0.86
CPSF4-211ENST00000471455 CCDC127Q96BQ5 260 aa9.66□□□□□ -0.86
CPSF4-211ENST00000471455 ITPKCQ96DU7 683 aa9.66□□□□□ -0.86
CPSF4-211ENST00000471455 CLIC6Q96NY7 704 aa9.66□□□□□ -0.86
CPSF4-211ENST00000471455 FGFBP2Q9BYJ0 223 aa9.66□□□□□ -0.86
CPSF4-211ENST00000471455 DNAI2Q9GZS0 605 aa9.66□□□□□ -0.86
CPSF4-211ENST00000471455 FBXO44Q9H4M3 255 aa9.66□□□□□ -0.86
CPSF4-211ENST00000471455 FAM124BQ9H5Z6 455 aaPredicted RBP9.66□□□□□ -0.86
CPSF4-211ENST00000471455 MAGEF1Q9HAY2 307 aa9.66□□□□□ -0.86
CPSF4-211ENST00000471455 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.66□□□□□ -0.863e-7■■■■■ 76.5
CPSF4-211ENST00000471455 SPHK2Q9NRA0 654 aa9.66□□□□□ -0.86
CPSF4-211ENST00000471455 AGPAT3Q9NRZ7 376 aa9.66□□□□□ -0.86
CPSF4-211ENST00000471455 CALCOCO1Q9P1Z2 691 aa9.66□□□□□ -0.86
CPSF4-211ENST00000471455 WDR35Q9P2L0 1181 aa9.66□□□□□ -0.86
CPSF4-211ENST00000471455 NXF1Q9UBU9 619 aaKnown RBP9.66□□□□□ -0.86
CPSF4-211ENST00000471455 MBD1Q9UIS9 605 aaPredicted RBP9.66□□□□□ -0.86
CPSF4-211ENST00000471455 PCNX2A6NKB5 2137 aa9.65□□□□□ -0.86
CPSF4-211ENST00000471455 A0A1W2PQD8 194 aa9.65□□□□□ -0.86
CPSF4-211ENST00000471455 SRRM3A6NNA2 597 aaPredicted RBP9.65□□□□□ -0.86
CPSF4-211ENST00000471455 HYAL3O43820 417 aaPredicted RBP9.65□□□□□ -0.86
CPSF4-211ENST00000471455 NDUFS2O75306 463 aa9.65□□□□□ -0.86
CPSF4-211ENST00000471455 SNRPBP14678 240 aaKnown RBP9.65□□□□□ -0.86
CPSF4-211ENST00000471455 GABRG2P18507 467 aa9.65□□□□□ -0.86
CPSF4-211ENST00000471455 CYP2J2P51589 502 aa9.65□□□□□ -0.86
CPSF4-211ENST00000471455 SLC5A3P53794 718 aa9.65□□□□□ -0.86
CPSF4-211ENST00000471455 ASIC1P78348 528 aa9.65□□□□□ -0.86
CPSF4-211ENST00000471455 CEBPZQ03701 1054 aaKnown RBP9.65□□□□□ -0.86
CPSF4-211ENST00000471455 PTK2Q05397 1052 aa9.65□□□□□ -0.86
CPSF4-211ENST00000471455 ZNF33AQ06730 810 aa9.65□□□□□ -0.86
CPSF4-211ENST00000471455 SLC14A1Q13336 389 aa9.65□□□□□ -0.86
CPSF4-211ENST00000471455 BIRC3Q13489 604 aa9.65□□□□□ -0.86
CPSF4-211ENST00000471455 ACAP1Q15027 740 aa9.65□□□□□ -0.86
CPSF4-211ENST00000471455 SLC39A14Q15043 492 aa9.65□□□□□ -0.86
CPSF4-211ENST00000471455 ZNF699Q32M78 642 aa9.65□□□□□ -0.86
CPSF4-211ENST00000471455 WDR45BQ5MNZ6 344 aa9.65□□□□□ -0.86
CPSF4-211ENST00000471455 VASH1Q7L8A9 365 aaPredicted RBP9.65□□□□□ -0.86
CPSF4-211ENST00000471455 TADA2BQ86TJ2 420 aa9.65□□□□□ -0.86
CPSF4-211ENST00000471455 FAM35AQ86V20 835 aa9.65□□□□□ -0.86
CPSF4-211ENST00000471455 CHPFQ8IZ52 775 aa9.65□□□□□ -0.86
CPSF4-211ENST00000471455 PHTF2Q8N3S3 785 aa9.65□□□□□ -0.86
CPSF4-211ENST00000471455 MINDY1Q8N5J2 469 aa9.65□□□□□ -0.86
CPSF4-211ENST00000471455 PDILTQ8N807 584 aa9.65□□□□□ -0.86
CPSF4-211ENST00000471455 ZDHHC5Q9C0B5 715 aa9.65□□□□□ -0.86
CPSF4-211ENST00000471455 ZSCAN16Q9H4T2 348 aaPredicted RBP9.65□□□□□ -0.86
CPSF4-211ENST00000471455 CAPN10Q9HC96 672 aa9.65□□□□□ -0.86
CPSF4-211ENST00000471455 TLR8Q9NR97 1041 aaKnown RBP9.65□□□□□ -0.86
CPSF4-211ENST00000471455 TMEM74BQ9NUR3 256 aa9.65□□□□□ -0.86
CPSF4-211ENST00000471455 DNAJC17Q9NVM6 304 aaKnown RBP9.65□□□□□ -0.86
CPSF4-211ENST00000471455 STARD13Q9Y3M8 1113 aa9.65□□□□□ -0.86
CPSF4-211ENST00000471455 PCDHB9Q9Y5E1 797 aa9.65□□□□□ -0.86
CPSF4-211ENST00000471455 TNRC6BQ9UPQ9 1833 aaKnown RBP9.65□□□□□ -0.86
CPSF4-211ENST00000471455 FASNP49327 2511 aaKnown RBP9.64□□□□□ -0.87
CPSF4-211ENST00000471455 MYO18AQ92614 2054 aaKnown RBP9.64□□□□□ -0.87
CPSF4-211ENST00000471455 SPAARA0A1B0GVQ0 90 aa9.64□□□□□ -0.87
CPSF4-211ENST00000471455 GFRA2O00451 464 aa9.64□□□□□ -0.87
CPSF4-211ENST00000471455 NPC1O15118 1278 aa9.64□□□□□ -0.87
CPSF4-211ENST00000471455 CACNG3O60359 315 aa9.64□□□□□ -0.87
CPSF4-211ENST00000471455 TLR5O60602 858 aa9.64□□□□□ -0.87
CPSF4-211ENST00000471455 FBXO45P0C2W1 286 aa9.64□□□□□ -0.87
CPSF4-211ENST00000471455 CACNA2D1P54289 1103 aa9.64□□□□□ -0.87
CPSF4-211ENST00000471455 CUL4AQ13619 759 aa9.64□□□□□ -0.87
CPSF4-211ENST00000471455 STARD3Q14849 445 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms