RNA–Protein interactions for RNA: ENST00000470285.1

GCFC2-206, Transcript of GC-rich sequence DNA-binding factor 2, human

TSL 5

Gene GCFC2, Length 423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GCFC2-206	ENST00000470285	VPS50	Q96JG6	964 aa		4.59	□□□□□ -1.67
GCFC2-206	ENST00000470285	CAMK1G	Q96NX5	476 aa		4.59	□□□□□ -1.67
GCFC2-206	ENST00000470285	USP29	Q9HBJ7	922 aa		4.59	□□□□□ -1.67
GCFC2-206	ENST00000470285	SEMA4B	Q9NPR2	832 aa	Predicted RBP	4.59	□□□□□ -1.67
GCFC2-206	ENST00000470285	DKK4	Q9UBT3	224 aa		4.59	□□□□□ -1.67
GCFC2-206	ENST00000470285	L1RE1	Q9UN81	338 aa		4.59	□□□□□ -1.67
GCFC2-206	ENST00000470285	EVPL	Q92817	2033 aa		4.58	□□□□□ -1.68
GCFC2-206	ENST00000470285	TTBK1	Q5TCY1	1321 aa	Predicted RBP	4.58	□□□□□ -1.68
GCFC2-206	ENST00000470285	CFAP69	A5D8W1	941 aa		4.58	□□□□□ -1.68
GCFC2-206	ENST00000470285	C2CD4B	A6NLJ0	364 aa		4.58	□□□□□ -1.68
GCFC2-206	ENST00000470285	FAM227A	F5H4B4	570 aa		4.58	□□□□□ -1.68
GCFC2-206	ENST00000470285	RAB27B	O00194	218 aa		4.58	□□□□□ -1.68
GCFC2-206	ENST00000470285	FGF2	P09038	288 aa		4.58	□□□□□ -1.68
GCFC2-206	ENST00000470285	PDGFRB	P09619	1106 aa		4.58	□□□□□ -1.68
GCFC2-206	ENST00000470285	TXN	P10599	105 aa	Known RBP	4.58	□□□□□ -1.68
GCFC2-206	ENST00000470285	BRAF	P15056	766 aa		4.58	□□□□□ -1.68
GCFC2-206	ENST00000470285	TPH1	P17752	444 aa		4.58	□□□□□ -1.68
GCFC2-206	ENST00000470285	TNFRSF1B	P20333	461 aa		4.58	□□□□□ -1.68
GCFC2-206	ENST00000470285	EIF4A1	P60842	406 aa	Known RBP	4.58	□□□□□ -1.68
GCFC2-206	ENST00000470285	CLCA4	Q14CN2	919 aa		4.58	□□□□□ -1.68
GCFC2-206	ENST00000470285	CNN3	Q15417	329 aa	Known RBP	4.58	□□□□□ -1.68
GCFC2-206	ENST00000470285	CNGA2	Q16280	664 aa		4.58	□□□□□ -1.68
GCFC2-206	ENST00000470285	C3orf38	Q5JPI3	329 aa		4.58	□□□□□ -1.68
GCFC2-206	ENST00000470285	YAF2	Q8IY57	180 aa		4.58	□□□□□ -1.68
GCFC2-206	ENST00000470285	FAM71D	Q8N9W8	422 aa		4.58	□□□□□ -1.68
GCFC2-206	ENST00000470285	BCAS4	Q8TDM0	211 aa		4.58	□□□□□ -1.68
GCFC2-206	ENST00000470285	STAG1	Q8WVM7	1258 aa		4.58	□□□□□ -1.68
GCFC2-206	ENST00000470285	ZDHHC12	Q96GR4	267 aa		4.58	□□□□□ -1.68
GCFC2-206	ENST00000470285	THOC3	Q96J01	351 aa	Known RBP	4.58	□□□□□ -1.68
GCFC2-206	ENST00000470285	HIST1H2AA	Q96QV6	131 aa		4.58	□□□□□ -1.68
GCFC2-206	ENST00000470285	TM2D2	Q9BX73	214 aa		4.58	□□□□□ -1.68
GCFC2-206	ENST00000470285	NUAK2	Q9H093	628 aa		4.58	□□□□□ -1.68
GCFC2-206	ENST00000470285	DDX56	Q9NY93	547 aa	Known RBP	4.58	□□□□□ -1.68
GCFC2-206	ENST00000470285	VPS51	Q9UID3	782 aa		4.58	□□□□□ -1.68
GCFC2-206	ENST00000470285	MID2	Q9UJV3	735 aa		4.58	□□□□□ -1.68
GCFC2-206	ENST00000470285	TPCN1	Q9ULQ1	816 aa		4.58	□□□□□ -1.68
GCFC2-206	ENST00000470285	SLC27A6	Q9Y2P4	619 aa		4.58	□□□□□ -1.68
GCFC2-206	ENST00000470285	IGLV5-39	A0A0G2JS06	123 aa		4.57	□□□□□ -1.68
GCFC2-206	ENST00000470285	RRH	O14718	337 aa		4.57	□□□□□ -1.68
GCFC2-206	ENST00000470285	SNX2	O60749	519 aa		4.57	□□□□□ -1.68
GCFC2-206	ENST00000470285	PRAMEF2	O60811	474 aa		4.57	□□□□□ -1.68
GCFC2-206	ENST00000470285	INMT	O95050	263 aa		4.57	□□□□□ -1.68
GCFC2-206	ENST00000470285	PLAU	P00749	431 aa		4.57	□□□□□ -1.68
GCFC2-206	ENST00000470285	IL1R1	P14778	569 aa		4.57	□□□□□ -1.68
GCFC2-206	ENST00000470285	ZKSCAN1	P17029	563 aa	Predicted RBP	4.57	□□□□□ -1.68
GCFC2-206	ENST00000470285	BTF3	P20290	206 aa	Known RBP	4.57	□□□□□ -1.68
GCFC2-206	ENST00000470285	EPHB1	P54762	984 aa		4.57	□□□□□ -1.68
GCFC2-206	ENST00000470285	RPS16	P62249	146 aa	Known RBP	4.57	□□□□□ -1.68
GCFC2-206	ENST00000470285	KPNB1	Q14974	876 aa	Known RBP	4.57	□□□□□ -1.68
GCFC2-206	ENST00000470285	UBAP2	Q5T6F2	1119 aa	Known RBP	4.57	□□□□□ -1.68
GCFC2-206	ENST00000470285	KRTAP5-4	Q6L8H1	288 aa		4.57	□□□□□ -1.68
GCFC2-206	ENST00000470285	MZT2A	Q6P582	158 aa		4.57	□□□□□ -1.68
GCFC2-206	ENST00000470285	ZNF549	Q6P9A3	640 aa		4.57	□□□□□ -1.68
GCFC2-206	ENST00000470285	CLEC9A	Q6UXN8	241 aa		4.57	□□□□□ -1.68
GCFC2-206	ENST00000470285	ZNF793	Q6ZN11	406 aa		4.57	□□□□□ -1.68
GCFC2-206	ENST00000470285	CINP	Q9BW66	212 aa	Predicted RBP	4.57	□□□□□ -1.68
GCFC2-206	ENST00000470285	ZCWPW1	Q9H0M4	648 aa		4.57	□□□□□ -1.68
GCFC2-206	ENST00000470285	CHST8	Q9H2A9	424 aa		4.57	□□□□□ -1.68
GCFC2-206	ENST00000470285	MLXIP	Q9HAP2	919 aa		4.57	□□□□□ -1.68
GCFC2-206	ENST00000470285	TMEM8A	Q9HCN3	771 aa		4.57	□□□□□ -1.68
GCFC2-206	ENST00000470285	COL20A1	Q9P218	1284 aa		4.57	□□□□□ -1.68
GCFC2-206	ENST00000470285	DNAJB11	Q9UBS4	358 aa		4.57	□□□□□ -1.68
GCFC2-206	ENST00000470285	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	4.56	□□□□□ -1.68
GCFC2-206	ENST00000470285	U2AF1L5	P0DN76	240 aa	Predicted RBP	4.56	□□□□□ -1.68
GCFC2-206	ENST00000470285	RBL1	P28749	1068 aa		4.56	□□□□□ -1.68
GCFC2-206	ENST00000470285	NTSR1	P30989	418 aa		4.56	□□□□□ -1.68
GCFC2-206	ENST00000470285	CDKN2A	P42771	156 aa	Known RBP	4.56	□□□□□ -1.68
GCFC2-206	ENST00000470285	COPA	P53621	1224 aa		4.56	□□□□□ -1.68
GCFC2-206	ENST00000470285	U2AF1	Q01081	240 aa	Known RBP eCLIP	4.56	□□□□□ -1.68
GCFC2-206	ENST00000470285	FMO1	Q01740	532 aa		4.56	□□□□□ -1.68
GCFC2-206	ENST00000470285	CCDC15	Q0P6D6	951 aa		4.56	□□□□□ -1.68
GCFC2-206	ENST00000470285	PLAG1	Q6DJT9	500 aa		4.56	□□□□□ -1.68
GCFC2-206	ENST00000470285	CXorf57	Q6NSI4	855 aa	Known RBP	4.56	□□□□□ -1.68
GCFC2-206	ENST00000470285	DLK2	Q6UY11	383 aa		4.56	□□□□□ -1.68
GCFC2-206	ENST00000470285	TRMT61A	Q96FX7	289 aa	Known RBP	4.56	□□□□□ -1.68
GCFC2-206	ENST00000470285	P2RY11	Q96G91	374 aa		4.56	□□□□□ -1.68
GCFC2-206	ENST00000470285	AGO4	Q9HCK5	861 aa	Known RBP	4.56	□□□□□ -1.68
GCFC2-206	ENST00000470285	MLXIPL	Q9NP71	852 aa		4.56	□□□□□ -1.68
GCFC2-206	ENST00000470285	VPS45	Q9NRW7	570 aa		4.56	□□□□□ -1.68
GCFC2-206	ENST00000470285	ARL8B	Q9NVJ2	186 aa		4.56	□□□□□ -1.68
GCFC2-206	ENST00000470285	TMEM45A	Q9NWC5	275 aa		4.56	□□□□□ -1.68
GCFC2-206	ENST00000470285	ZIM2	Q9NZV7	527 aa		4.56	□□□□□ -1.68
GCFC2-206	ENST00000470285	CAPN11	Q9UMQ6	739 aa		4.56	□□□□□ -1.68
GCFC2-206	ENST00000470285	COL15A1	P39059	1388 aa		4.55	□□□□□ -1.68
GCFC2-206	ENST00000470285	GTPBP1	O00178	669 aa	Known RBP	4.55	□□□□□ -1.68
GCFC2-206	ENST00000470285	FOXN3	O00409	490 aa	Predicted RBP	4.55	□□□□□ -1.68
GCFC2-206	ENST00000470285	PRPF3	O43395	683 aa	Known RBP	4.55	□□□□□ -1.68
GCFC2-206	ENST00000470285	CA12	O43570	354 aa		4.55	□□□□□ -1.68
GCFC2-206	ENST00000470285	USP12	O75317	370 aa		4.55	□□□□□ -1.68
GCFC2-206	ENST00000470285	MBP	P02686	304 aa	Predicted RBP	4.55	□□□□□ -1.68
GCFC2-206	ENST00000470285	T-ENOL	P0DO92	83 aa		4.55	□□□□□ -1.68
GCFC2-206	ENST00000470285	TMEM225B	P0DP42	221 aa		4.55	□□□□□ -1.68
GCFC2-206	ENST00000470285	IL6ST	P40189	918 aa	Predicted RBP	4.55	□□□□□ -1.68
GCFC2-206	ENST00000470285	JAK3	P52333	1124 aa		4.55	□□□□□ -1.68
GCFC2-206	ENST00000470285	ANAPC15	P60006	121 aa		4.55	□□□□□ -1.68
GCFC2-206	ENST00000470285	DNASE1L3	Q13609	305 aa		4.55	□□□□□ -1.68
GCFC2-206	ENST00000470285	MANEA	Q5SRI9	462 aa		4.55	□□□□□ -1.68
GCFC2-206	ENST00000470285	MANEAL	Q5VSG8	457 aa		4.55	□□□□□ -1.68
GCFC2-206	ENST00000470285	FAM57B	Q71RH2	274 aa		4.55	□□□□□ -1.68
GCFC2-206	ENST00000470285	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	4.55	□□□□□ -1.68

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