RNA–Protein interactions for RNA: ENST00000470285.1

GCFC2-206, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5

Gene GCFC2, Length 423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-206ENST00000470285 AEBP2Q6ZN18 517 aaPredicted RBP28.29■■■□□ 2.12
GCFC2-206ENST00000470285 CHIC1Q5VXU3 224 aa26.57■■□□□ 1.84
GCFC2-206ENST00000470285 SENP3Q9H4L4 574 aaPredicted RBP24.25■■□□□ 1.47
GCFC2-206ENST00000470285 PHF23Q9BUL5 403 aaPredicted RBP23.87■■□□□ 1.41
GCFC2-206ENST00000470285 FOXD1Q16676 465 aa22.61■■□□□ 1.21
GCFC2-206ENST00000470285 POTEDQ86YR6 584 aa22.19■■□□□ 1.14
GCFC2-206ENST00000470285 MSH5O43196 834 aa21.33■■□□□ 1.01
GCFC2-206ENST00000470285 PLPPR3Q6T4P5 718 aa21.16■□□□□ 0.98
GCFC2-206ENST00000470285 PIAS4Q8N2W9 510 aaPredicted RBP21.1■□□□□ 0.97
GCFC2-206ENST00000470285 PPP6R1Q9UPN7 881 aa20.85■□□□□ 0.93
GCFC2-206ENST00000470285 ADRA2BP18089 450 aa20.8■□□□□ 0.92
GCFC2-206ENST00000470285 MAPK8IP2Q13387 824 aaPredicted RBP19.2■□□□□ 0.66
GCFC2-206ENST00000470285 DMRT2Q9Y5R5 561 aa19.15■□□□□ 0.66
GCFC2-206ENST00000470285 SCAF1Q9H7N4 1312 aaKnown RBP19.09■□□□□ 0.65
GCFC2-206ENST00000470285 CACNB1Q02641 598 aaPredicted RBP18.68■□□□□ 0.58
GCFC2-206ENST00000470285 PPP4R3CPQ6ZMV5 832 aa18.57■□□□□ 0.56
GCFC2-206ENST00000470285 DCAF8L1A6NGE4 600 aa18.49■□□□□ 0.55
GCFC2-206ENST00000470285 HOXD11P31277 338 aaPredicted RBP18.3■□□□□ 0.52
GCFC2-206ENST00000470285 CNKSR2Q8WXI2 1034 aa18.19■□□□□ 0.5
GCFC2-206ENST00000470285 RNF39Q9H2S5 420 aa18.13■□□□□ 0.49
GCFC2-206ENST00000470285 RNF216Q9NWF9 866 aaPredicted RBP18.1■□□□□ 0.49
GCFC2-206ENST00000470285 NCBP3Q53F19 620 aaKnown RBP17.94■□□□□ 0.46
GCFC2-206ENST00000470285 C1QBPQ07021 282 aaKnown RBP17.87■□□□□ 0.45
GCFC2-206ENST00000470285 DNAJC5BQ9UF47 199 aa17.71■□□□□ 0.43
GCFC2-206ENST00000470285 NPM3O75607 178 aaKnown RBP17.65■□□□□ 0.42
GCFC2-206ENST00000470285 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.52■□□□□ 0.4
GCFC2-206ENST00000470285 KCNA4P22459 653 aa17.51■□□□□ 0.39
GCFC2-206ENST00000470285 POTEHQ6S545 545 aa17.21■□□□□ 0.35
GCFC2-206ENST00000470285 U3KPZ7 1027 aaPredicted RBP17.05■□□□□ 0.32
GCFC2-206ENST00000470285 CAPN15O75808 1086 aa16.97■□□□□ 0.31
GCFC2-206ENST00000470285 SPINK5Q9NQ38 1064 aaPredicted RBP16.91■□□□□ 0.3
GCFC2-206ENST00000470285 DSG3P32926 999 aa16.87■□□□□ 0.29
GCFC2-206ENST00000470285 SLC4A2P04920 1241 aa16.81■□□□□ 0.28
GCFC2-206ENST00000470285 APLP2Q06481 763 aa16.63■□□□□ 0.25
GCFC2-206ENST00000470285 TRHP20396 242 aaPredicted RBP16.61■□□□□ 0.25
GCFC2-206ENST00000470285 SLC4A1APQ9BWU0 796 aaKnown RBP16.58■□□□□ 0.24
GCFC2-206ENST00000470285 ZNF219Q9P2Y4 722 aaPredicted RBP16.55■□□□□ 0.24
GCFC2-206ENST00000470285 ABCB7O75027 752 aa16.53■□□□□ 0.24
GCFC2-206ENST00000470285 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.5■□□□□ 0.23
GCFC2-206ENST00000470285 HNRNPUL2Q1KMD3 747 aaKnown RBP16.5■□□□□ 0.23
GCFC2-206ENST00000470285 SAMD1Q6SPF0 538 aaPredicted RBP16.38■□□□□ 0.21
GCFC2-206ENST00000470285 MYCNP04198 464 aaPredicted RBP16.34■□□□□ 0.21
GCFC2-206ENST00000470285 FOXD4L1Q9NU39 408 aa16.29■□□□□ 0.2
GCFC2-206ENST00000470285 RBM42Q9BTD8 480 aaKnown RBP16.16■□□□□ 0.18
GCFC2-206ENST00000470285 ZBTB22O15209 634 aa16.09■□□□□ 0.17
GCFC2-206ENST00000470285 POLA2Q14181 598 aa16.05■□□□□ 0.16
GCFC2-206ENST00000470285 ATF5Q9Y2D1 282 aaPredicted RBP15.92■□□□□ 0.14
GCFC2-206ENST00000470285 CHRDL2Q6WN34 429 aa15.91■□□□□ 0.14
GCFC2-206ENST00000470285 ATXN8OSP0DMR3 200 aa15.8■□□□□ 0.12
GCFC2-206ENST00000470285 ZBTB12Q9Y330 459 aaPredicted RBP15.72■□□□□ 0.11
GCFC2-206ENST00000470285 SP7Q8TDD2 431 aaPredicted RBP15.7■□□□□ 0.1
GCFC2-206ENST00000470285 AKT1S1Q96B36 256 aa15.69■□□□□ 0.1
GCFC2-206ENST00000470285 CSRNP3Q8WYN3 585 aa15.57■□□□□ 0.08
GCFC2-206ENST00000470285 OSCARQ8IYS5 282 aa15.56■□□□□ 0.08
GCFC2-206ENST00000470285 REM2Q8IYK8 340 aaPredicted RBP15.54■□□□□ 0.08
GCFC2-206ENST00000470285 PIP4P2Q8N4L2 257 aa15.46■□□□□ 0.07
GCFC2-206ENST00000470285 EHMT2Q96KQ7 1210 aa15.44■□□□□ 0.06
GCFC2-206ENST00000470285 PITPNM1O00562 1244 aa15.38■□□□□ 0.05
GCFC2-206ENST00000470285 HAX1O00165 279 aa15.32■□□□□ 0.04
GCFC2-206ENST00000470285 FBLN2P98095 1184 aa15.31■□□□□ 0.04
GCFC2-206ENST00000470285 FXR2P51116 673 aaKnown RBP eCLIP15.29■□□□□ 0.04
GCFC2-206ENST00000470285 MKRN4PQ13434 485 aaPredicted RBP15.21■□□□□ 0.03
GCFC2-206ENST00000470285 SPDYE2BA6NHP3 402 aa15.19■□□□□ 0.02
GCFC2-206ENST00000470285 SPDYE6P0CI01 402 aa15.19■□□□□ 0.02
GCFC2-206ENST00000470285 SPDYE2Q495Y8 402 aa15.19■□□□□ 0.02
GCFC2-206ENST00000470285 CLEC11AQ9Y240 323 aa15.06■□□□□ 0
GCFC2-206ENST00000470285 SPDYE1Q8NFV5 336 aaPredicted RBP15.02■□□□□ -0
GCFC2-206ENST00000470285 PRKAR2AP13861 404 aaKnown RBP15.01□□□□□ -0.01
GCFC2-206ENST00000470285 EVX2Q03828 476 aa15.01□□□□□ -0.01
GCFC2-206ENST00000470285 ZNF692Q9BU19 519 aaPredicted RBP14.98□□□□□ -0.01
GCFC2-206ENST00000470285 SSUH2Q9Y2M2 353 aa14.96□□□□□ -0.01
GCFC2-206ENST00000470285 C19orf67A6NJJ6 358 aa14.82□□□□□ -0.04
GCFC2-206ENST00000470285 CHADLQ6NUI6 762 aa14.76□□□□□ -0.05
GCFC2-206ENST00000470285 PABPN1Q86U42 306 aaKnown RBP eCLIP14.76□□□□□ -0.05
GCFC2-206ENST00000470285 PRR29P0C7W0 189 aa14.74□□□□□ -0.05
GCFC2-206ENST00000470285 GABBR2O75899 941 aa14.7□□□□□ -0.06
GCFC2-206ENST00000470285 LHX8Q68G74 356 aa14.7□□□□□ -0.06
GCFC2-206ENST00000470285 SPDYE4A6NLX3 237 aa14.61□□□□□ -0.07
GCFC2-206ENST00000470285 PLSCR2Q9NRY7 297 aa14.54□□□□□ -0.08
GCFC2-206ENST00000470285 CD44P16070 742 aaKnown RBP14.52□□□□□ -0.09
GCFC2-206ENST00000470285 FARP1Q9Y4F1 1045 aaPredicted RBP14.49□□□□□ -0.09
GCFC2-206ENST00000470285 STAG3Q9UJ98 1225 aa14.43□□□□□ -0.1
GCFC2-206ENST00000470285 CLCN6P51797 869 aa14.37□□□□□ -0.11
GCFC2-206ENST00000470285 POTEIP0CG38 1075 aa14.34□□□□□ -0.11
GCFC2-206ENST00000470285 PROM2Q8N271 834 aa14.32□□□□□ -0.12
GCFC2-206ENST00000470285 DCBLD2Q96PD2 775 aa14.3□□□□□ -0.12
GCFC2-206ENST00000470285 ZRANB1Q9UGI0 708 aa14.27□□□□□ -0.13
GCFC2-206ENST00000470285 CREBZFQ9NS37 354 aa14.26□□□□□ -0.13
GCFC2-206ENST00000470285 ZNF579Q8NAF0 562 aaKnown RBP14.24□□□□□ -0.13
GCFC2-206ENST00000470285 PAK3O75914 559 aaPredicted RBP14.12□□□□□ -0.15
GCFC2-206ENST00000470285 GALR2O43603 387 aaPredicted RBP14.1□□□□□ -0.15
GCFC2-206ENST00000470285 FKBP8Q14318 412 aa14.09□□□□□ -0.15
GCFC2-206ENST00000470285 MNX1P50219 401 aaPredicted RBP14.04□□□□□ -0.16
GCFC2-206ENST00000470285 NPM1P06748 294 aaKnown RBP eCLIP14.03□□□□□ -0.16
GCFC2-206ENST00000470285 PHF12Q96QT6 1004 aa14.01□□□□□ -0.17
GCFC2-206ENST00000470285 MIER1Q8N108 512 aa13.9□□□□□ -0.18
GCFC2-206ENST00000470285 OTUD5Q96G74 571 aa13.9□□□□□ -0.18
GCFC2-206ENST00000470285 POTEMA6NI47 508 aa13.89□□□□□ -0.19
GCFC2-206ENST00000470285 PLEKHG5O94827 1062 aa13.89□□□□□ -0.19
GCFC2-206ENST00000470285 POTEB2H3BUK9 544 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms