RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 PIWIL2Q8TC59 973 aaKnown RBP9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 TFB1MQ8WVM0 346 aaKnown RBP9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 EME1Q96AY2 570 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 WRNIP1Q96S55 665 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 ZNF577Q9BSK1 485 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 UNC45AQ9H3U1 944 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 TMEM8AQ9HCN3 771 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 FETUBQ9UGM5 382 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 IP6K2Q9UHH9 426 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 ARHGAP26Q9UNA1 814 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 DRG1Q9Y295 367 aaKnown RBP9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 PIK3R2O00459 728 aa9.86□□□□□ -0.83
NHLRC3-203ENST00000470258 CASQ2O14958 399 aaPredicted RBP9.86□□□□□ -0.83
NHLRC3-203ENST00000470258 SERPINB7O75635 380 aa9.86□□□□□ -0.83
NHLRC3-203ENST00000470258 PRAMEP78395 509 aa9.86□□□□□ -0.83
NHLRC3-203ENST00000470258 CCDC142Q17RM4 750 aa9.86□□□□□ -0.83
NHLRC3-203ENST00000470258 LGSNQ5TDP6 509 aa9.86□□□□□ -0.83
NHLRC3-203ENST00000470258 PGM2L1Q6PCE3 622 aa9.86□□□□□ -0.83
NHLRC3-203ENST00000470258 TMEM110Q86TL2 294 aa9.86□□□□□ -0.83
NHLRC3-203ENST00000470258 ZSCAN18Q8TBC5 510 aaPredicted RBP9.86□□□□□ -0.83
NHLRC3-203ENST00000470258 C17orf50Q8WW18 174 aa9.86□□□□□ -0.83
NHLRC3-203ENST00000470258 COX4I2Q96KJ9 171 aa9.86□□□□□ -0.83
NHLRC3-203ENST00000470258 TCHPQ9BT92 498 aa9.86□□□□□ -0.83
NHLRC3-203ENST00000470258 THAP1Q9NVV9 213 aa9.86□□□□□ -0.83
NHLRC3-203ENST00000470258 C6orf203Q9P0P8 240 aaPredicted RBP9.86□□□□□ -0.83
NHLRC3-203ENST00000470258 SCINQ9Y6U3 715 aa9.86□□□□□ -0.83
NHLRC3-203ENST00000470258 TMX2-CTNND1H3BSU7 103 aa9.86□□□□□ -0.83
NHLRC3-203ENST00000470258 FOSP01100 380 aaPredicted RBP9.86□□□□□ -0.83
NHLRC3-203ENST00000470258 BPGMP07738 259 aa9.86□□□□□ -0.83
NHLRC3-203ENST00000470258 CD48P09326 243 aa9.86□□□□□ -0.83
NHLRC3-203ENST00000470258 GSTT2P0CG29 244 aa9.86□□□□□ -0.83
NHLRC3-203ENST00000470258 GSTT2BP0CG30 244 aa9.86□□□□□ -0.83
NHLRC3-203ENST00000470258 RPL10P27635 214 aaKnown RBP9.86□□□□□ -0.83
NHLRC3-203ENST00000470258 GNA15P30679 374 aa9.86□□□□□ -0.83
NHLRC3-203ENST00000470258 ECE1P42892 770 aa9.86□□□□□ -0.83
NHLRC3-203ENST00000470258 PDCD4Q53EL6 469 aaKnown RBP9.86□□□□□ -0.83
NHLRC3-203ENST00000470258 BRDTQ58F21 947 aaPredicted RBP9.86□□□□□ -0.83
NHLRC3-203ENST00000470258 WDR44Q5JSH3 913 aa9.86□□□□□ -0.83
NHLRC3-203ENST00000470258 HSPH1Q92598 858 aa9.86□□□□□ -0.83
NHLRC3-203ENST00000470258 SIRPGQ9P1W8 387 aa9.86□□□□□ -0.83
NHLRC3-203ENST00000470258 EBF1Q9UH73 591 aa9.86□□□□□ -0.83
NHLRC3-203ENST00000470258 ZNRF3Q9ULT6 936 aa9.86□□□□□ -0.83
NHLRC3-203ENST00000470258 PPME1Q9Y570 386 aa9.86□□□□□ -0.83
NHLRC3-203ENST00000470258 TAF1LQ8IZX4 1826 aa9.86□□□□□ -0.83
NHLRC3-203ENST00000470258 NAV1Q8NEY1 1877 aa9.86□□□□□ -0.83
NHLRC3-203ENST00000470258 KANSL1LA0AUZ9 987 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 CSPG5O95196 566 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 SLC1A6P48664 564 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 GPC3P51654 580 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 SEPT6Q14141 434 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 C6orf183Q5T699 404 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 FAM102BQ5T8I3 360 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 DNAJC24Q6P3W2 148 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 RFX6Q8HWS3 928 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 BHLHE22Q8NFJ8 381 aaPredicted RBP9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 CRYGNQ8WXF5 182 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 NKD2Q969F2 451 aaPredicted RBP9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 FAF2Q96CS3 445 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 CDRT15Q96T59 188 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 SETDB2Q96T68 719 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 NRDE2Q9H7Z3 1164 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 PARVAQ9NVD7 372 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 PLK2Q9NYY3 685 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 ZC3H7BQ9UGR2 993 aaKnown RBP9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 PCSK1NQ9UHG2 260 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 ITGA11Q9UKX5 1188 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 DDX60LQ5H9U9 1706 aaKnown RBP9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 A0A0B4J269 797 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 ARHGEF37A1IGU5 675 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 FUOMA2VDF0 154 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 MAP3K6O95382 1288 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 COX4I1P13073 169 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 ENO3P13929 434 aaPredicted RBP9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 TNNI1P19237 187 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 CDK9P50750 372 aaKnown RBP9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 MAPK10P53779 464 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 NUP107P57740 925 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 EIF3EP60228 445 aaKnown RBP9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 APOFQ13790 326 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 ADGRE1Q14246 886 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 XKR5Q6UX68 686 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 FAM196AQ6ZSG2 479 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 SH2D5Q6ZV89 423 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 CASP10Q92851 521 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 UPF1Q92900 1129 aaKnown RBP eCLIP9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 VPS50Q96JG6 964 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 ZNF778Q96MU6 729 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 PPP1R10Q96QC0 940 aaKnown RBP9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 PKP2Q99959 881 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 CALN1Q9BXU9 219 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 DDX4Q9NQI0 724 aaKnown RBP9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 ZNF536O15090 1300 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 QSER1Q2KHR3 1735 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 GOLGA8QA0A0J9YX86 632 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 GOLGA8OA6NCC3 632 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 GOLGA8NF8WBI6 632 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 MATN2O00339 956 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 GIPC1O14908 333 aa9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 ZBTB11O95625 1053 aaPredicted RBP9.85□□□□□ -0.83
NHLRC3-203ENST00000470258 IL1BP01584 269 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms