RNA–Protein interactions for RNA: ENST00000469939.1

TTC3-213, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-213ENST00000469939 NPIPB8E9PQR5 432 aa4.82□□□□□ -1.64
TTC3-213ENST00000469939 OVOL3O00110 214 aa4.82□□□□□ -1.64
TTC3-213ENST00000469939 KIAA0355O15063 1070 aa4.82□□□□□ -1.64
TTC3-213ENST00000469939 P4HA2O15460 535 aa4.82□□□□□ -1.64
TTC3-213ENST00000469939 CCNT2O60583 730 aaKnown RBP4.82□□□□□ -1.64
TTC3-213ENST00000469939 FZD7O75084 574 aa4.82□□□□□ -1.64
TTC3-213ENST00000469939 TAF5LO75529 589 aa4.82□□□□□ -1.64
TTC3-213ENST00000469939 RASAL1O95294 804 aa4.82□□□□□ -1.64
TTC3-213ENST00000469939 TFRCP02786 760 aaKnown RBP4.82□□□□□ -1.64
TTC3-213ENST00000469939 DNTTP04053 509 aa4.82□□□□□ -1.64
TTC3-213ENST00000469939 CYP21A2P08686 494 aa4.82□□□□□ -1.64
TTC3-213ENST00000469939 ACTN2P35609 894 aa4.82□□□□□ -1.64
TTC3-213ENST00000469939 RBM5P52756 815 aaKnown RBP eCLIP4.82□□□□□ -1.64
TTC3-213ENST00000469939 HMGA2P52926 109 aa4.82□□□□□ -1.64
TTC3-213ENST00000469939 ARF3P61204 181 aaPredicted RBP4.82□□□□□ -1.64
TTC3-213ENST00000469939 ARF1P84077 181 aaKnown RBP4.82□□□□□ -1.64
TTC3-213ENST00000469939 CUL4AQ13619 759 aa4.82□□□□□ -1.64
TTC3-213ENST00000469939 FHL3Q13643 280 aa4.82□□□□□ -1.64
TTC3-213ENST00000469939 TUBA3CQ13748 450 aa4.82□□□□□ -1.64
TTC3-213ENST00000469939 IQCB1Q15051 598 aa4.82□□□□□ -1.64
TTC3-213ENST00000469939 GALNTL6Q49A17 601 aa4.82□□□□□ -1.64
TTC3-213ENST00000469939 CTXN3Q4LDR2 81 aa4.82□□□□□ -1.64
TTC3-213ENST00000469939 RABL3Q5HYI8 236 aa4.82□□□□□ -1.64
TTC3-213ENST00000469939 TUBA3EQ6PEY2 450 aa4.82□□□□□ -1.64
TTC3-213ENST00000469939 H1FNTQ75WM6 255 aaPredicted RBP4.82□□□□□ -1.64
TTC3-213ENST00000469939 ARMC8Q8IUR7 673 aa4.82□□□□□ -1.64
TTC3-213ENST00000469939 TTC30BQ8N4P2 665 aa4.82□□□□□ -1.64
TTC3-213ENST00000469939 USP38Q8NB14 1042 aa4.82□□□□□ -1.64
TTC3-213ENST00000469939 BPIFB1Q8TDL5 484 aa4.82□□□□□ -1.64
TTC3-213ENST00000469939 KCNG4Q8TDN1 519 aa4.82□□□□□ -1.64
TTC3-213ENST00000469939 WDR60Q8WVS4 1066 aa4.82□□□□□ -1.64
TTC3-213ENST00000469939 CPT1BQ92523 772 aa4.82□□□□□ -1.64
TTC3-213ENST00000469939 ZMAT2Q96NC0 199 aaKnown RBP4.82□□□□□ -1.64
TTC3-213ENST00000469939 USP44Q9H0E7 712 aa4.82□□□□□ -1.64
TTC3-213ENST00000469939 SPON1Q9HCB6 807 aa4.82□□□□□ -1.64
TTC3-213ENST00000469939 ZCCHC17Q9NP64 241 aaKnown RBP4.82□□□□□ -1.64
TTC3-213ENST00000469939 NDUFAF4Q9P032 175 aa4.82□□□□□ -1.64
TTC3-213ENST00000469939 GIMAP2Q9UG22 337 aa4.82□□□□□ -1.64
TTC3-213ENST00000469939 MAGED1Q9Y5V3 778 aaPredicted RBP4.82□□□□□ -1.64
TTC3-213ENST00000469939 TBKBP1A7MCY6 615 aa4.81□□□□□ -1.64
TTC3-213ENST00000469939 GRXCR1A8MXD5 290 aa4.81□□□□□ -1.64
TTC3-213ENST00000469939 H3BNC9 293 aa4.81□□□□□ -1.64
TTC3-213ENST00000469939 KLK10O43240 276 aa4.81□□□□□ -1.64
TTC3-213ENST00000469939 TSPAN3O60637 253 aa4.81□□□□□ -1.64
TTC3-213ENST00000469939 FAM20BO75063 409 aa4.81□□□□□ -1.64
TTC3-213ENST00000469939 RPP40O75818 363 aaKnown RBP4.81□□□□□ -1.64
TTC3-213ENST00000469939 MLYCDO95822 493 aa4.81□□□□□ -1.64
TTC3-213ENST00000469939 PEX11BO96011 259 aa4.81□□□□□ -1.64
TTC3-213ENST00000469939 LMNAP02545 664 aaKnown RBP4.81□□□□□ -1.64
TTC3-213ENST00000469939 GDF5P43026 501 aa4.81□□□□□ -1.64
TTC3-213ENST00000469939 CDK7P50613 346 aa4.81□□□□□ -1.64
TTC3-213ENST00000469939 SLC25A3Q00325 362 aa4.81□□□□□ -1.64
TTC3-213ENST00000469939 ROR1Q01973 937 aa4.81□□□□□ -1.64
TTC3-213ENST00000469939 KRT17Q04695 432 aa4.81□□□□□ -1.64
TTC3-213ENST00000469939 BMT2Q1RMZ1 405 aa4.81□□□□□ -1.64
TTC3-213ENST00000469939 PTCHD3Q3KNS1 767 aa4.81□□□□□ -1.64
TTC3-213ENST00000469939 MGAT5BQ3V5L5 792 aa4.81□□□□□ -1.64
TTC3-213ENST00000469939 ANO7Q6IWH7 933 aa4.81□□□□□ -1.64
TTC3-213ENST00000469939 DRICH1Q6PGQ1 229 aaPredicted RBP4.81□□□□□ -1.64
TTC3-213ENST00000469939 USP51Q70EK9 711 aa4.81□□□□□ -1.64
TTC3-213ENST00000469939 FITM2Q8N6M3 262 aa4.81□□□□□ -1.64
TTC3-213ENST00000469939 PPP2R3CQ969Q6 453 aa4.81□□□□□ -1.64
TTC3-213ENST00000469939 NSUN4Q96CB9 384 aaKnown RBP4.81□□□□□ -1.64
TTC3-213ENST00000469939 SORCS2Q96PQ0 1159 aa4.81□□□□□ -1.64
TTC3-213ENST00000469939 TLR10Q9BXR5 811 aa4.81□□□□□ -1.64
TTC3-213ENST00000469939 IL21RQ9HBE5 538 aa4.81□□□□□ -1.64
TTC3-213ENST00000469939 VPS51Q9UID3 782 aa4.81□□□□□ -1.64
TTC3-213ENST00000469939 SORCS3Q9UPU3 1222 aa4.81□□□□□ -1.64
TTC3-213ENST00000469939 SHOC2Q9UQ13 582 aa4.81□□□□□ -1.64
TTC3-213ENST00000469939 NAALADL1Q9UQQ1 740 aa4.81□□□□□ -1.64
TTC3-213ENST00000469939 KIF28PB7ZC32 967 aa4.8□□□□□ -1.64
TTC3-213ENST00000469939 TRIM24O15164 1050 aa4.8□□□□□ -1.64
TTC3-213ENST00000469939 CD3EAPO15446 510 aaKnown RBP4.8□□□□□ -1.64
TTC3-213ENST00000469939 ZSCAN9O15535 394 aaPredicted RBP4.8□□□□□ -1.64
TTC3-213ENST00000469939 RGS10O43665 173 aa4.8□□□□□ -1.64
TTC3-213ENST00000469939 SRGAP2O75044 1071 aa4.8□□□□□ -1.64
TTC3-213ENST00000469939 RECQL4O94761 1208 aa4.8□□□□□ -1.64
TTC3-213ENST00000469939 PRSS23O95084 383 aa4.8□□□□□ -1.64
TTC3-213ENST00000469939 ZNF202O95125 648 aa4.8□□□□□ -1.64
TTC3-213ENST00000469939 CER1O95813 267 aa4.8□□□□□ -1.64
TTC3-213ENST00000469939 F9P00740 461 aa4.8□□□□□ -1.64
TTC3-213ENST00000469939 ATXN1LP0C7T5 689 aaKnown RBP4.8□□□□□ -1.64
TTC3-213ENST00000469939 CPA1P15085 419 aa4.8□□□□□ -1.64
TTC3-213ENST00000469939 CHRM3P20309 590 aa4.8□□□□□ -1.64
TTC3-213ENST00000469939 KCNA3P22001 575 aa4.8□□□□□ -1.64
TTC3-213ENST00000469939 MGAT1P26572 445 aa4.8□□□□□ -1.64
TTC3-213ENST00000469939 PSMC2P35998 433 aaKnown RBP4.8□□□□□ -1.64
TTC3-213ENST00000469939 ACVRL1P37023 503 aa4.8□□□□□ -1.64
TTC3-213ENST00000469939 MCM2P49736 904 aa4.8□□□□□ -1.64
TTC3-213ENST00000469939 DGKEP52429 567 aa4.8□□□□□ -1.64
TTC3-213ENST00000469939 ZNF134P52741 427 aa4.8□□□□□ -1.64
TTC3-213ENST00000469939 LILRA4P59901 499 aa4.8□□□□□ -1.64
TTC3-213ENST00000469939 SLFN5Q08AF3 891 aa4.8□□□□□ -1.64
TTC3-213ENST00000469939 PDCLQ13371 301 aa4.8□□□□□ -1.64
TTC3-213ENST00000469939 EIF4A2Q14240 407 aaKnown RBP4.8□□□□□ -1.64
TTC3-213ENST00000469939 GPR68Q15743 365 aa4.8□□□□□ -1.64
TTC3-213ENST00000469939 CSRP2Q16527 193 aa4.8□□□□□ -1.64
TTC3-213ENST00000469939 NOMO2Q5JPE7 1267 aa4.8□□□□□ -1.64
TTC3-213ENST00000469939 ZNF484Q5JVG2 852 aa4.8□□□□□ -1.64
TTC3-213ENST00000469939 ATXN7L2Q5T6C5 722 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms