RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 WDR6Q9NNW5 1121 aaKnown RBP8.62□□□□□ -1.03
BRCA1-208ENST00000468300 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.62□□□□□ -1.03
BRCA1-208ENST00000468300 SUFUQ9UMX1 484 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.62□□□□□ -1.03
BRCA1-208ENST00000468300 ARHGEF37A1IGU5 675 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 MTMR11A4FU01 709 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 TTI1O43156 1089 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 KRT1P04264 644 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 TNFRSF8P28908 595 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 COPS2P61201 443 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 TSPY1Q01534 308 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 MMRN1Q13201 1228 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 GPR17Q13304 367 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 DPYSL3Q14195 570 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 BEND6Q5SZJ8 279 aaPredicted RBP8.62□□□□□ -1.03
BRCA1-208ENST00000468300 SDHAF4Q5VUM1 108 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 GSPT2Q8IYD1 628 aaKnown RBP8.62□□□□□ -1.03
BRCA1-208ENST00000468300 HNRNPLLQ8WVV9 542 aaKnown RBP8.62□□□□□ -1.03
BRCA1-208ENST00000468300 CASKIN2Q8WXE0 1202 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 FUBP3Q96I24 572 aaKnown RBP eCLIP8.62□□□□□ -1.03
BRCA1-208ENST00000468300 CLSTN3Q9BQT9 956 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 DCLK3Q9C098 648 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 POPDC2Q9HBU9 364 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 PIGVQ9NUD9 493 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 DDX56Q9NY93 547 aaKnown RBP8.62□□□□□ -1.03
BRCA1-208ENST00000468300 STIM2Q9P246 746 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 MTRRQ9UBK8 725 aa8.62□□□□□ -1.03
BRCA1-208ENST00000468300 ATG2AQ2TAZ0 1938 aa8.61□□□□□ -1.03
BRCA1-208ENST00000468300 ESYT3A0FGR9 886 aa8.61□□□□□ -1.03
BRCA1-208ENST00000468300 FAM92AA1XBS5 289 aa8.61□□□□□ -1.03
BRCA1-208ENST00000468300 WDR27A2RRH5 827 aa8.61□□□□□ -1.03
BRCA1-208ENST00000468300 OR6C75A6NL08 312 aa8.61□□□□□ -1.03
BRCA1-208ENST00000468300 LILRB3O75022 631 aa8.61□□□□□ -1.03
BRCA1-208ENST00000468300 FBXO21O94952 628 aa8.61□□□□□ -1.03
BRCA1-208ENST00000468300 SEC31AO94979 1220 aaKnown RBP8.61□□□□□ -1.03
BRCA1-208ENST00000468300 RPL17P18621 184 aaKnown RBP8.61□□□□□ -1.03
BRCA1-208ENST00000468300 SDC4P31431 198 aa8.61□□□□□ -1.03
BRCA1-208ENST00000468300 MAGEA11P43364 429 aa8.61□□□□□ -1.03
BRCA1-208ENST00000468300 SNX16P57768 344 aa8.61□□□□□ -1.03
BRCA1-208ENST00000468300 PPP2R5EQ16537 467 aa8.61□□□□□ -1.03
BRCA1-208ENST00000468300 DDR2Q16832 855 aa8.61□□□□□ -1.03
BRCA1-208ENST00000468300 TFDP3Q5H9I0 405 aa8.61□□□□□ -1.03
BRCA1-208ENST00000468300 C8orf74Q6P047 294 aa8.61□□□□□ -1.03
BRCA1-208ENST00000468300 STRADAQ7RTN6 431 aa8.61□□□□□ -1.03
BRCA1-208ENST00000468300 SPATA2LQ8IUW3 424 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-208ENST00000468300 C1orf54Q8WWF1 131 aa8.61□□□□□ -1.03
BRCA1-208ENST00000468300 SLCO2A1Q92959 643 aa8.61□□□□□ -1.03
BRCA1-208ENST00000468300 FAF2Q96CS3 445 aa8.61□□□□□ -1.03
BRCA1-208ENST00000468300 PGAP3Q96FM1 320 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-208ENST00000468300 C8orf48Q96LL4 319 aa8.61□□□□□ -1.03
BRCA1-208ENST00000468300 FAM118BQ9BPY3 351 aa8.61□□□□□ -1.03
BRCA1-208ENST00000468300 SNRNP25Q9BV90 132 aaKnown RBP8.61□□□□□ -1.03
BRCA1-208ENST00000468300 DNAI2Q9GZS0 605 aa8.61□□□□□ -1.03
BRCA1-208ENST00000468300 NEUROG2Q9H2A3 272 aa8.61□□□□□ -1.03
BRCA1-208ENST00000468300 SLITRK6Q9H5Y7 841 aa8.61□□□□□ -1.03
BRCA1-208ENST00000468300 NMUR1Q9HB89 426 aa8.61□□□□□ -1.03
BRCA1-208ENST00000468300 GPATCH2LQ9NWQ4 482 aa8.61□□□□□ -1.03
BRCA1-208ENST00000468300 OBSL1O75147 1896 aa8.61□□□□□ -1.03
BRCA1-208ENST00000468300 MDM4O15151 490 aa8.61□□□□□ -1.03
BRCA1-208ENST00000468300 L1CAMP32004 1257 aa8.61□□□□□ -1.03
BRCA1-208ENST00000468300 NOS2P35228 1153 aa8.61□□□□□ -1.03
BRCA1-208ENST00000468300 COILP38432 576 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-208ENST00000468300 KCNJ1P48048 391 aa8.61□□□□□ -1.03
BRCA1-208ENST00000468300 ALDH7A1P49419 539 aaKnown RBP8.61□□□□□ -1.03
BRCA1-208ENST00000468300 C4orf50Q6ZRC1 276 aa8.61□□□□□ -1.03
BRCA1-208ENST00000468300 PQLC3Q8N755 202 aa8.61□□□□□ -1.03
BRCA1-208ENST00000468300 TEKT4Q8WW24 435 aa8.61□□□□□ -1.03
BRCA1-208ENST00000468300 IRGQQ8WZA9 623 aa8.61□□□□□ -1.03
BRCA1-208ENST00000468300 POM121Q96HA1 1249 aa8.61□□□□□ -1.03
BRCA1-208ENST00000468300 NAP1L3Q99457 506 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-208ENST00000468300 LRRC4Q9HBW1 653 aa8.61□□□□□ -1.03
BRCA1-208ENST00000468300 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.61□□□□□ -1.03
BRCA1-208ENST00000468300 ABI2Q9NYB9 513 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-208ENST00000468300 HEXIM1O94992 359 aaKnown RBP8.6□□□□□ -1.03
BRCA1-208ENST00000468300 GJB5O95377 273 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 KRT7P08729 469 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 ATF6P18850 670 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 CARSP49589 748 aaKnown RBP8.6□□□□□ -1.03
BRCA1-208ENST00000468300 SLC8A3P57103 927 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 DSG1Q02413 1049 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 CLUL1Q15846 466 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 DCAF6Q58WW2 860 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 DCP1BQ8IZD4 617 aaKnown RBP8.6□□□□□ -1.03
BRCA1-208ENST00000468300 SIX6OS1Q8N1H7 587 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 PYROXD2Q8N2H3 581 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 GPR152Q8TDT2 470 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 AENQ8WTP8 325 aaKnown RBP8.6□□□□□ -1.03
BRCA1-208ENST00000468300 HSPH1Q92598 858 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 RBM41Q96IZ5 413 aaKnown RBP8.6□□□□□ -1.03
BRCA1-208ENST00000468300 TRIM51Q9BSJ1 452 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 PCDH18Q9HCL0 1135 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.6□□□□□ -1.03
BRCA1-208ENST00000468300 SAE1Q9UBE0 346 aaPredicted RBP8.6□□□□□ -1.03
BRCA1-208ENST00000468300 RABL2AQ9UBK7 228 aaPredicted RBP8.6□□□□□ -1.03
BRCA1-208ENST00000468300 FZD10Q9ULW2 581 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 EFR3BQ9Y2G0 817 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 SLC27A5Q9Y2P5 690 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 BACE2Q9Y5Z0 518 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 TRANK1O15050 2925 aa8.6□□□□□ -1.03
BRCA1-208ENST00000468300 LRRD1A4D1F6 860 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms