RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 C16orf96A6NNT2 1141 aa3.6□□□□□ -1.83
GTF3C3-209ENST00000466862 SMAD6O43541 496 aaKnown RBP3.6□□□□□ -1.83
GTF3C3-209ENST00000466862 CBFA2T3O75081 653 aa3.6□□□□□ -1.83
GTF3C3-209ENST00000466862 HRGP04196 525 aa3.6□□□□□ -1.83
GTF3C3-209ENST00000466862 FAM90A13PP0C7W8 464 aa3.6□□□□□ -1.83
GTF3C3-209ENST00000466862 FAM90A24PP0C7X0 464 aa3.6□□□□□ -1.83
GTF3C3-209ENST00000466862 MYF5P13349 255 aa3.6□□□□□ -1.83
GTF3C3-209ENST00000466862 TKTP29401 623 aaKnown RBP3.6□□□□□ -1.83
GTF3C3-209ENST00000466862 EIF4A1P60842 406 aaKnown RBP3.6□□□□□ -1.83
GTF3C3-209ENST00000466862 HSF1Q00613 529 aa3.6□□□□□ -1.83
GTF3C3-209ENST00000466862 SLC29A2Q14542 456 aa3.6□□□□□ -1.83
GTF3C3-209ENST00000466862 KCNAB1Q14722 419 aa3.6□□□□□ -1.83
GTF3C3-209ENST00000466862 NFE2Q16621 373 aaPredicted RBP3.6□□□□□ -1.83
GTF3C3-209ENST00000466862 PLEKHG6Q3KR16 790 aa3.6□□□□□ -1.83
GTF3C3-209ENST00000466862 ODR4Q5SWX8 454 aa3.6□□□□□ -1.83
GTF3C3-209ENST00000466862 PLAG1Q6DJT9 500 aa3.6□□□□□ -1.83
GTF3C3-209ENST00000466862 CYB5RLQ6IPT4 315 aa3.6□□□□□ -1.83
GTF3C3-209ENST00000466862 C11orf44Q8N8P7 122 aa3.6□□□□□ -1.83
GTF3C3-209ENST00000466862 ADAMTS15Q8TE58 950 aa3.6□□□□□ -1.83
GTF3C3-209ENST00000466862 APIPQ96GX9 242 aa3.6□□□□□ -1.83
GTF3C3-209ENST00000466862 TRMOQ9BU70 441 aa3.6□□□□□ -1.83
GTF3C3-209ENST00000466862 BRIP1Q9BX63 1249 aa3.6□□□□□ -1.83
GTF3C3-209ENST00000466862 TM2D2Q9BX73 214 aa3.6□□□□□ -1.83
GTF3C3-209ENST00000466862 DNAJB11Q9UBS4 358 aa3.6□□□□□ -1.83
GTF3C3-209ENST00000466862 STEAP1Q9UHE8 339 aa3.6□□□□□ -1.83
GTF3C3-209ENST00000466862 TPCN1Q9ULQ1 816 aa3.6□□□□□ -1.83
GTF3C3-209ENST00000466862 NOB1Q9ULX3 412 aaKnown RBP3.6□□□□□ -1.83
GTF3C3-209ENST00000466862 A0A087WZ62 844 aa3.59□□□□□ -1.83
GTF3C3-209ENST00000466862 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.59□□□□□ -1.83
GTF3C3-209ENST00000466862 A0A0G2JK05 382 aa3.59□□□□□ -1.83
GTF3C3-209ENST00000466862 TPP1O14773 563 aa3.59□□□□□ -1.83
GTF3C3-209ENST00000466862 CA12O43570 354 aa3.59□□□□□ -1.83
GTF3C3-209ENST00000466862 ALPLP05186 524 aa3.59□□□□□ -1.83
GTF3C3-209ENST00000466862 U2AF1L5P0DN76 240 aaPredicted RBP3.59□□□□□ -1.83
GTF3C3-209ENST00000466862 CD19P15391 556 aa3.59□□□□□ -1.83
GTF3C3-209ENST00000466862 BTF3P20290 206 aaKnown RBP3.59□□□□□ -1.83
GTF3C3-209ENST00000466862 TACR3P29371 465 aa3.59□□□□□ -1.83
GTF3C3-209ENST00000466862 CARSP49589 748 aaKnown RBP3.59□□□□□ -1.83
GTF3C3-209ENST00000466862 RAE1P78406 368 aaKnown RBP3.59□□□□□ -1.83
GTF3C3-209ENST00000466862 TXNL4AP83876 142 aaKnown RBP3.59□□□□□ -1.83
GTF3C3-209ENST00000466862 U2AF1Q01081 240 aaKnown RBP eCLIP3.59□□□□□ -1.83
GTF3C3-209ENST00000466862 STK3Q13188 491 aa3.59□□□□□ -1.83
GTF3C3-209ENST00000466862 KPNB1Q14974 876 aaKnown RBP3.59□□□□□ -1.83
GTF3C3-209ENST00000466862 SLC9C1Q4G0N8 1177 aa3.59□□□□□ -1.83
GTF3C3-209ENST00000466862 AASDHQ4L235 1098 aaPredicted RBP3.59□□□□□ -1.83
GTF3C3-209ENST00000466862 CC2D1BQ5T0F9 858 aaKnown RBP3.59□□□□□ -1.83
GTF3C3-209ENST00000466862 CHST15Q7LFX5 561 aaPredicted RBP3.59□□□□□ -1.83
GTF3C3-209ENST00000466862 YAF2Q8IY57 180 aa3.59□□□□□ -1.83
GTF3C3-209ENST00000466862 FAM156AQ8NDB6 213 aa3.59□□□□□ -1.83
GTF3C3-209ENST00000466862 MBD3L2Q8NHZ7 208 aaPredicted RBP3.59□□□□□ -1.83
GTF3C3-209ENST00000466862 MPLKIPQ8TAP9 179 aa3.59□□□□□ -1.83
GTF3C3-209ENST00000466862 P2RY11Q96G91 374 aa3.59□□□□□ -1.83
GTF3C3-209ENST00000466862 WDR24Q96S15 920 aa3.59□□□□□ -1.83
GTF3C3-209ENST00000466862 LRRC27Q9C0I9 530 aa3.59□□□□□ -1.83
GTF3C3-209ENST00000466862 AGO4Q9HCK5 861 aaKnown RBP3.59□□□□□ -1.83
GTF3C3-209ENST00000466862 NKX1-2Q9UD57 310 aaPredicted RBP3.59□□□□□ -1.83
GTF3C3-209ENST00000466862 HDAC9Q9UKV0 1011 aa3.59□□□□□ -1.83
GTF3C3-209ENST00000466862 MAFFQ9ULX9 164 aa3.59□□□□□ -1.83
GTF3C3-209ENST00000466862 HS3ST3B1Q9Y662 390 aa3.59□□□□□ -1.83
GTF3C3-209ENST00000466862 NOTCH4Q99466 2003 aa3.58□□□□□ -1.84
GTF3C3-209ENST00000466862 B4DGG1 531 aa3.58□□□□□ -1.84
GTF3C3-209ENST00000466862 INPPL1O15357 1258 aa3.58□□□□□ -1.84
GTF3C3-209ENST00000466862 TLX3O43711 291 aaPredicted RBP3.58□□□□□ -1.84
GTF3C3-209ENST00000466862 ZBED1O96006 694 aa3.58□□□□□ -1.84
GTF3C3-209ENST00000466862 PLAUP00749 431 aa3.58□□□□□ -1.84
GTF3C3-209ENST00000466862 TPH1P17752 444 aa3.58□□□□□ -1.84
GTF3C3-209ENST00000466862 SCP2P22307 547 aa3.58□□□□□ -1.84
GTF3C3-209ENST00000466862 GALNSP34059 522 aa3.58□□□□□ -1.84
GTF3C3-209ENST00000466862 ME1P48163 572 aa3.58□□□□□ -1.84
GTF3C3-209ENST00000466862 CACNB3P54284 484 aa3.58□□□□□ -1.84
GTF3C3-209ENST00000466862 B4GALNT1Q00973 533 aa3.58□□□□□ -1.84
GTF3C3-209ENST00000466862 DNASE1L3Q13609 305 aa3.58□□□□□ -1.84
GTF3C3-209ENST00000466862 ERV3-1Q14264 604 aa3.58□□□□□ -1.84
GTF3C3-209ENST00000466862 MINDY4Q4G0A6 757 aa3.58□□□□□ -1.84
GTF3C3-209ENST00000466862 MZT2AQ6P582 158 aa3.58□□□□□ -1.84
GTF3C3-209ENST00000466862 UNC13DQ70J99 1090 aa3.58□□□□□ -1.84
GTF3C3-209ENST00000466862 PRR11Q96HE9 360 aaPredicted RBP3.58□□□□□ -1.84
GTF3C3-209ENST00000466862 FAM227BQ96M60 508 aa3.58□□□□□ -1.84
GTF3C3-209ENST00000466862 FCRL5Q96RD9 977 aa3.58□□□□□ -1.84
GTF3C3-209ENST00000466862 FAM234AQ9H0X4 552 aa3.58□□□□□ -1.84
GTF3C3-209ENST00000466862 FAM204AQ9H8W3 233 aa3.58□□□□□ -1.84
GTF3C3-209ENST00000466862 SAP30LQ9HAJ7 183 aa3.58□□□□□ -1.84
GTF3C3-209ENST00000466862 SEMA4BQ9NPR2 832 aaPredicted RBP3.58□□□□□ -1.84
GTF3C3-209ENST00000466862 POT1Q9NUX5 634 aa3.58□□□□□ -1.84
GTF3C3-209ENST00000466862 HPSEQ9Y251 543 aa3.58□□□□□ -1.84
GTF3C3-209ENST00000466862 F8W8V4 182 aa3.57□□□□□ -1.84
GTF3C3-209ENST00000466862 GTPBP1O00178 669 aaKnown RBP3.57□□□□□ -1.84
GTF3C3-209ENST00000466862 MARCH6O60337 910 aa3.57□□□□□ -1.84
GTF3C3-209ENST00000466862 TULP3O75386 442 aa3.57□□□□□ -1.84
GTF3C3-209ENST00000466862 WDR47O94967 919 aa3.57□□□□□ -1.84
GTF3C3-209ENST00000466862 INMTO95050 263 aa3.57□□□□□ -1.84
GTF3C3-209ENST00000466862 MT-ND5P03915 603 aa3.57□□□□□ -1.84
GTF3C3-209ENST00000466862 CBSLP0DN79 551 aa3.57□□□□□ -1.84
GTF3C3-209ENST00000466862 ARP10275 920 aa3.57□□□□□ -1.84
GTF3C3-209ENST00000466862 PEX2P28328 305 aa3.57□□□□□ -1.84
GTF3C3-209ENST00000466862 HOXA7P31268 230 aaPredicted RBP3.57□□□□□ -1.84
GTF3C3-209ENST00000466862 IDUAP35475 653 aa3.57□□□□□ -1.84
GTF3C3-209ENST00000466862 CBSP35520 551 aa3.57□□□□□ -1.84
GTF3C3-209ENST00000466862 WDR5P61964 334 aaKnown RBP3.57□□□□□ -1.84
GTF3C3-209ENST00000466862 IGBP1P78318 339 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms