RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 SERPINB3P29508 390 aa18.99■□□□□ 0.63
SYNE4-204ENST00000465425 MAGEA6P43360 314 aa18.99■□□□□ 0.63
SYNE4-204ENST00000465425 CDK16Q00536 496 aa18.99■□□□□ 0.63
SYNE4-204ENST00000465425 ANKRD20A2Q5SQ80 823 aa18.99■□□□□ 0.63
SYNE4-204ENST00000465425 ANKRD20A1Q5TYW2 823 aa18.99■□□□□ 0.63
SYNE4-204ENST00000465425 MCUQ8NE86 351 aa18.99■□□□□ 0.63
SYNE4-204ENST00000465425 KHSRPQ92945 711 aaKnown RBP eCLIP18.99■□□□□ 0.63
SYNE4-204ENST00000465425 C16orf70Q9BSU1 422 aa18.99■□□□□ 0.63
SYNE4-204ENST00000465425 VTA1Q9NP79 307 aa18.99■□□□□ 0.63
SYNE4-204ENST00000465425 NUMBLQ9Y6R0 609 aa18.99■□□□□ 0.63
SYNE4-204ENST00000465425 ZNF487B1APH4 448 aa18.99■□□□□ 0.63
SYNE4-204ENST00000465425 C1QAP02745 245 aa18.99■□□□□ 0.63
SYNE4-204ENST00000465425 GRIK4Q16099 956 aa18.99■□□□□ 0.63
SYNE4-204ENST00000465425 ZNF410Q86VK4 478 aa18.99■□□□□ 0.63
SYNE4-204ENST00000465425 TRIM42Q8IWZ5 723 aa18.99■□□□□ 0.63
SYNE4-204ENST00000465425 NUDCD1Q96RS6 583 aa18.99■□□□□ 0.63
SYNE4-204ENST00000465425 SLC13A1Q9BZW2 595 aa18.99■□□□□ 0.63
SYNE4-204ENST00000465425 PLEKHA5Q9HAU0 1116 aa18.99■□□□□ 0.63
SYNE4-204ENST00000465425 SNTG2Q9NY99 539 aa18.99■□□□□ 0.63
SYNE4-204ENST00000465425 CNTN3Q9P232 1028 aa18.99■□□□□ 0.63
SYNE4-204ENST00000465425 A8MXQ7 604 aa18.98■□□□□ 0.63
SYNE4-204ENST00000465425 PPEF2O14830 753 aa18.98■□□□□ 0.63
SYNE4-204ENST00000465425 KLF11O14901 512 aa18.98■□□□□ 0.63
SYNE4-204ENST00000465425 DLDP09622 509 aaKnown RBP18.98■□□□□ 0.63
SYNE4-204ENST00000465425 CALB2P22676 271 aa18.98■□□□□ 0.63
SYNE4-204ENST00000465425 ADCYAP1R1P41586 468 aa18.98■□□□□ 0.63
SYNE4-204ENST00000465425 NAA25Q14CX7 972 aa18.98■□□□□ 0.63
SYNE4-204ENST00000465425 DPYSL2Q16555 572 aa18.98■□□□□ 0.63
SYNE4-204ENST00000465425 KIZQ2M2Z5 673 aa18.98■□□□□ 0.63
SYNE4-204ENST00000465425 WASHC2DQ5SRD0 308 aa18.98■□□□□ 0.63
SYNE4-204ENST00000465425 UNC5AQ6ZN44 842 aa18.98■□□□□ 0.63
SYNE4-204ENST00000465425 CDHR3Q6ZTQ4 885 aa18.98■□□□□ 0.63
SYNE4-204ENST00000465425 BEST2Q8NFU1 509 aa18.98■□□□□ 0.63
SYNE4-204ENST00000465425 GSDMBQ8TAX9 411 aa18.98■□□□□ 0.63
SYNE4-204ENST00000465425 STK32AQ8WU08 396 aa18.98■□□□□ 0.63
SYNE4-204ENST00000465425 MTBPQ96DY7 904 aa18.98■□□□□ 0.63
SYNE4-204ENST00000465425 SGIP1Q9BQI5 828 aa18.98■□□□□ 0.63
SYNE4-204ENST00000465425 KCNK13Q9HB14 408 aa18.98■□□□□ 0.63
SYNE4-204ENST00000465425 FBXO6Q9NRD1 293 aaPredicted RBP18.98■□□□□ 0.63
SYNE4-204ENST00000465425 AP4E1Q9UPM8 1137 aa18.98■□□□□ 0.63
SYNE4-204ENST00000465425 DERAQ9Y315 318 aa18.98■□□□□ 0.63
SYNE4-204ENST00000465425 PLLPQ9Y342 182 aa18.98■□□□□ 0.63
SYNE4-204ENST00000465425 CITO14578 2027 aa18.98■□□□□ 0.63
SYNE4-204ENST00000465425 PEX11AO75192 247 aa18.97■□□□□ 0.63
SYNE4-204ENST00000465425 TOMM70O94826 608 aa18.97■□□□□ 0.63
SYNE4-204ENST00000465425 CYP2C8P10632 490 aa18.97■□□□□ 0.63
SYNE4-204ENST00000465425 MYL2P10916 166 aa18.97■□□□□ 0.63
SYNE4-204ENST00000465425 TFE3P19532 575 aaPredicted RBP18.97■□□□□ 0.63
SYNE4-204ENST00000465425 L1CAMP32004 1257 aa18.97■□□□□ 0.63
SYNE4-204ENST00000465425 PTPN9P43378 593 aa18.97■□□□□ 0.63
SYNE4-204ENST00000465425 NR2C2P49116 596 aa18.97■□□□□ 0.63
SYNE4-204ENST00000465425 SLC8A3P57103 927 aa18.97■□□□□ 0.63
SYNE4-204ENST00000465425 GBE1Q04446 702 aa18.97■□□□□ 0.63
SYNE4-204ENST00000465425 HEATR6Q6AI08 1181 aaKnown RBP18.97■□□□□ 0.63
SYNE4-204ENST00000465425 FBXO41Q8TF61 875 aa18.97■□□□□ 0.63
SYNE4-204ENST00000465425 CDCA5Q96FF9 252 aa18.97■□□□□ 0.63
SYNE4-204ENST00000465425 NKX1-2Q9UD57 310 aaPredicted RBP18.97■□□□□ 0.63
SYNE4-204ENST00000465425 RPL26L1Q9UNX3 145 aaKnown RBP18.97■□□□□ 0.63
SYNE4-204ENST00000465425 DNAJC6O75061 913 aa18.97■□□□□ 0.63
SYNE4-204ENST00000465425 GCATO75600 419 aa18.97■□□□□ 0.63
SYNE4-204ENST00000465425 METTL18O95568 372 aa18.97■□□□□ 0.63
SYNE4-204ENST00000465425 IL1BP01584 269 aa18.97■□□□□ 0.63
SYNE4-204ENST00000465425 ADORA2AP29274 412 aa18.97■□□□□ 0.63
SYNE4-204ENST00000465425 TMPRSS15P98073 1019 aa18.97■□□□□ 0.63
SYNE4-204ENST00000465425 BMPR2Q13873 1038 aa18.97■□□□□ 0.63
SYNE4-204ENST00000465425 R3HDM1Q15032 1099 aaKnown RBP18.97■□□□□ 0.63
SYNE4-204ENST00000465425 ATG16L1Q676U5 607 aa18.97■□□□□ 0.63
SYNE4-204ENST00000465425 UNC93AQ86WB7 457 aa18.97■□□□□ 0.63
SYNE4-204ENST00000465425 ARMC2Q8NEN0 867 aa18.97■□□□□ 0.63
SYNE4-204ENST00000465425 KCNV2Q8TDN2 545 aa18.97■□□□□ 0.63
SYNE4-204ENST00000465425 EMID1Q96A84 441 aaPredicted RBP18.97■□□□□ 0.63
SYNE4-204ENST00000465425 SKA1Q96BD8 255 aa18.97■□□□□ 0.63
SYNE4-204ENST00000465425 NSL1Q96IY1 281 aa18.97■□□□□ 0.63
SYNE4-204ENST00000465425 ZMAT2Q96NC0 199 aaKnown RBP18.97■□□□□ 0.63
SYNE4-204ENST00000465425 BTBD10Q9BSF8 475 aa18.97■□□□□ 0.63
SYNE4-204ENST00000465425 CXCL16Q9H2A7 254 aa18.97■□□□□ 0.63
SYNE4-204ENST00000465425 TLE6Q9H808 572 aa18.97■□□□□ 0.63
SYNE4-204ENST00000465425 TUBGCP4Q9UGJ1 667 aa18.97■□□□□ 0.63
SYNE4-204ENST00000465425 TPSB2P20231 275 aa18.96■□□□□ 0.63
SYNE4-204ENST00000465425 CCNG1P51959 295 aa18.96■□□□□ 0.63
SYNE4-204ENST00000465425 CCNA1P78396 465 aa18.96■□□□□ 0.63
SYNE4-204ENST00000465425 SARNPP82979 210 aaKnown RBP18.96■□□□□ 0.63
SYNE4-204ENST00000465425 BST2Q10589 180 aaKnown RBP18.96■□□□□ 0.63
SYNE4-204ENST00000465425 TPSAB1Q15661 275 aa18.96■□□□□ 0.63
SYNE4-204ENST00000465425 GLRA4Q5JXX5 417 aa18.96■□□□□ 0.63
SYNE4-204ENST00000465425 KCNT2Q6UVM3 1135 aa18.96■□□□□ 0.63
SYNE4-204ENST00000465425 LRRC52Q8N7C0 313 aa18.96■□□□□ 0.63
SYNE4-204ENST00000465425 CLEC4CQ8WTT0 213 aa18.96■□□□□ 0.63
SYNE4-204ENST00000465425 SNX27Q96L92 541 aa18.96■□□□□ 0.63
SYNE4-204ENST00000465425 ZNF570Q96NI8 536 aa18.96■□□□□ 0.63
SYNE4-204ENST00000465425 EBNA1BP2Q99848 306 aaKnown RBP18.96■□□□□ 0.63
SYNE4-204ENST00000465425 MECRQ9BV79 373 aa18.96■□□□□ 0.63
SYNE4-204ENST00000465425 ARL8BQ9NVJ2 186 aa18.96■□□□□ 0.63
SYNE4-204ENST00000465425 E7ENQ6 273 aa18.96■□□□□ 0.63
SYNE4-204ENST00000465425 GYG2O15488 501 aa18.96■□□□□ 0.63
SYNE4-204ENST00000465425 LCP1P13796 627 aa18.96■□□□□ 0.63
SYNE4-204ENST00000465425 GM2AP17900 193 aa18.96■□□□□ 0.63
SYNE4-204ENST00000465425 ADORA2BP29275 332 aa18.96■□□□□ 0.63
SYNE4-204ENST00000465425 ATXN1P54253 815 aaKnown RBP18.96■□□□□ 0.63
SYNE4-204ENST00000465425 SLC27A1Q6PCB7 646 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms