RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 MAN1C1Q9NR34 630 aa13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 STYXL1Q9Y6J8 313 aa13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 LRRC37AA6NMS7 1700 aa13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 AHDC1Q5TGY3 1603 aaPredicted RBP13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 NDC80O14777 642 aa13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 HNRNPRO43390 633 aaKnown RBP13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 PLA2G6O60733 806 aa13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 SIN3BO75182 1162 aa13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 FKBP6O75344 327 aa13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 ATG7O95352 703 aa13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 LSM8O95777 96 aaKnown RBP13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 TRUB2O95900 331 aaKnown RBP13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 PABPC4LP0CB38 370 aaKnown RBP13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 KCNA2P16389 499 aa13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 NCF2P19878 526 aaPredicted RBP13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 ACTR2P61160 394 aa13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 DEUP1Q05D60 604 aa13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 TAZQ16635 292 aa13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 SLC27A3Q5K4L6 730 aa13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 CMASQ8NFW8 434 aaPredicted RBP13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 PIWIL1Q96J94 861 aaKnown RBP13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 DDX18Q9NVP1 670 aaKnown RBP13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 IL1RAPL1Q9NZN1 696 aa13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 USP21Q9UK80 565 aa13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 LOXHD1Q8IVV2 1947 aa13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 CNTNAP1P78357 1384 aa13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 SLC15A5A6NIM6 579 aa13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 CREB3O43889 395 aa13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 EIF4BP23588 611 aaKnown RBP13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 CHRNA5P30532 468 aa13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 USP46P62068 366 aa13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 FOLH1Q04609 750 aa13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 PPP6R3Q5H9R7 873 aaPredicted RBP13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 HIC2Q96JB3 615 aa13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 MAGEB5Q9BZ81 275 aa13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 ACSS2Q9NR19 701 aa13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 HMGXB4Q9UGU5 601 aa13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 CDH22Q9UJ99 828 aa13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 POMPQ9Y244 141 aa13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 COMMD3-BMI1R4GMX3 469 aa13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.03□□□□□ -0.32
CLCNKA-204ENST00000464764 MMP10P09238 476 aa13.03□□□□□ -0.32
CLCNKA-204ENST00000464764 AOC1P19801 751 aa13.03□□□□□ -0.32
CLCNKA-204ENST00000464764 ATXN3P54252 364 aaPredicted RBP13.03□□□□□ -0.32
CLCNKA-204ENST00000464764 TLR1Q15399 786 aa13.03□□□□□ -0.32
CLCNKA-204ENST00000464764 TEDDM1Q5T9Z0 273 aa13.03□□□□□ -0.32
CLCNKA-204ENST00000464764 FRMD7Q6ZUT3 714 aa13.03□□□□□ -0.32
CLCNKA-204ENST00000464764 VSIG10LQ86VR7 867 aa13.03□□□□□ -0.32
CLCNKA-204ENST00000464764 XYLT1Q86Y38 959 aa13.03□□□□□ -0.32
CLCNKA-204ENST00000464764 FAM151AQ8WW52 585 aa13.03□□□□□ -0.32
CLCNKA-204ENST00000464764 MOCOSQ96EN8 888 aa13.03□□□□□ -0.32
CLCNKA-204ENST00000464764 PGLYRP2Q96PD5 576 aa13.03□□□□□ -0.32
CLCNKA-204ENST00000464764 SLC38A10Q9HBR0 1119 aa13.03□□□□□ -0.32
CLCNKA-204ENST00000464764 THAP1Q9NVV9 213 aa13.03□□□□□ -0.32
CLCNKA-204ENST00000464764 EFR3BQ9Y2G0 817 aa13.03□□□□□ -0.32
CLCNKA-204ENST00000464764 INPP5FQ9Y2H2 1132 aa13.03□□□□□ -0.32
CLCNKA-204ENST00000464764 CCDC160A6NGH7 325 aa13.03□□□□□ -0.32
CLCNKA-204ENST00000464764 APOEP02649 317 aa13.03□□□□□ -0.32
CLCNKA-204ENST00000464764 HMGCRP04035 888 aa13.03□□□□□ -0.32
CLCNKA-204ENST00000464764 ATP6V1B1P15313 513 aa13.03□□□□□ -0.32
CLCNKA-204ENST00000464764 OSBPP22059 807 aa13.03□□□□□ -0.32
CLCNKA-204ENST00000464764 COPAP53621 1224 aa13.03□□□□□ -0.32
CLCNKA-204ENST00000464764 SP2Q02086 613 aa13.03□□□□□ -0.32
CLCNKA-204ENST00000464764 WASHC5Q12768 1159 aa13.03□□□□□ -0.32
CLCNKA-204ENST00000464764 NOMO1Q15155 1222 aa13.03□□□□□ -0.32
CLCNKA-204ENST00000464764 TRNP1Q6NT89 227 aa13.03□□□□□ -0.32
CLCNKA-204ENST00000464764 AGR3Q8TD06 166 aa13.03□□□□□ -0.32
CLCNKA-204ENST00000464764 TFB1MQ8WVM0 346 aaKnown RBP13.03□□□□□ -0.32
CLCNKA-204ENST00000464764 TWNKQ96RR1 684 aa13.03□□□□□ -0.32
CLCNKA-204ENST00000464764 NIF3L1Q9GZT8 377 aa13.03□□□□□ -0.32
CLCNKA-204ENST00000464764 C1orf21Q9H246 121 aa13.03□□□□□ -0.32
CLCNKA-204ENST00000464764 JPH1Q9HDC5 661 aaPredicted RBP13.03□□□□□ -0.32
CLCNKA-204ENST00000464764 GALNT8Q9NY28 637 aa13.03□□□□□ -0.32
CLCNKA-204ENST00000464764 UBAP1Q9NZ09 502 aa13.03□□□□□ -0.32
CLCNKA-204ENST00000464764 HSFX1Q9UBD0 423 aa13.03□□□□□ -0.32
CLCNKA-204ENST00000464764 DNAJB4Q9UDY4 337 aa13.03□□□□□ -0.32
CLCNKA-204ENST00000464764 AK5Q9Y6K8 562 aa13.03□□□□□ -0.32
CLCNKA-204ENST00000464764 ADCY6O43306 1168 aa13.02□□□□□ -0.32
CLCNKA-204ENST00000464764 METTL18O95568 372 aa13.02□□□□□ -0.32
CLCNKA-204ENST00000464764 PSAPP07602 524 aa13.02□□□□□ -0.32
CLCNKA-204ENST00000464764 SLC1A6P48664 564 aa13.02□□□□□ -0.32
CLCNKA-204ENST00000464764 TAP1Q03518 808 aa13.02□□□□□ -0.32
CLCNKA-204ENST00000464764 PPM1JQ5JR12 505 aa13.02□□□□□ -0.32
CLCNKA-204ENST00000464764 MEX3CQ5U5Q3 659 aaKnown RBP13.02□□□□□ -0.32
CLCNKA-204ENST00000464764 SCYL2Q6P3W7 929 aa13.02□□□□□ -0.32
CLCNKA-204ENST00000464764 UGT2A3Q6UWM9 527 aa13.02□□□□□ -0.32
CLCNKA-204ENST00000464764 TRIM42Q8IWZ5 723 aa13.02□□□□□ -0.32
CLCNKA-204ENST00000464764 NETO2Q8NC67 525 aa13.02□□□□□ -0.32
CLCNKA-204ENST00000464764 UBA3Q8TBC4 463 aa13.02□□□□□ -0.32
CLCNKA-204ENST00000464764 PIWIL2Q8TC59 973 aaKnown RBP13.02□□□□□ -0.32
CLCNKA-204ENST00000464764 OXCT2Q9BYC2 517 aaPredicted RBP13.02□□□□□ -0.32
CLCNKA-204ENST00000464764 ZNF358Q9NW07 568 aa13.02□□□□□ -0.32
CLCNKA-204ENST00000464764 ATXN10Q9UBB4 475 aa13.02□□□□□ -0.32
CLCNKA-204ENST00000464764 EMCNQ9ULC0 261 aa13.02□□□□□ -0.32
CLCNKA-204ENST00000464764 APOBEC2Q9Y235 224 aaKnown RBP13.02□□□□□ -0.32
CLCNKA-204ENST00000464764 ADGRA2Q96PE1 1338 aa13.02□□□□□ -0.32
CLCNKA-204ENST00000464764 H0YIN7 160 aa13.02□□□□□ -0.33
CLCNKA-204ENST00000464764 KRT19P08727 400 aa13.02□□□□□ -0.33
CLCNKA-204ENST00000464764 TSHRP16473 764 aa13.02□□□□□ -0.33
CLCNKA-204ENST00000464764 PRKCHP24723 683 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms