RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 TOGARAM2Q6ZUX3 1019 aa23.87■■□□□ 1.41
USP4-208ENST00000464168 CHPFQ8IZ52 775 aa23.87■■□□□ 1.41
USP4-208ENST00000464168 IPO4Q8TEX9 1081 aaKnown RBP23.87■■□□□ 1.41
USP4-208ENST00000464168 GATA6Q92908 595 aa23.87■■□□□ 1.41
USP4-208ENST00000464168 XPO6Q96QU8 1125 aaKnown RBP23.87■■□□□ 1.41
USP4-208ENST00000464168 HNRNPABQ99729 332 aaKnown RBP23.87■■□□□ 1.41
USP4-208ENST00000464168 SLC32A1Q9H598 525 aa23.87■■□□□ 1.41
USP4-208ENST00000464168 CAPN10Q9HC96 672 aa23.87■■□□□ 1.41
USP4-208ENST00000464168 EXOC1Q9NV70 894 aa23.87■■□□□ 1.41
USP4-208ENST00000464168 WDFY3Q8IZQ1 3526 aa23.87■■□□□ 1.41
USP4-208ENST00000464168 DMXL2Q8TDJ6 3036 aa23.86■■□□□ 1.41
USP4-208ENST00000464168 UPK3BL1B0FP48 263 aa23.86■■□□□ 1.41
USP4-208ENST00000464168 UPK3BL2E5RIL1 263 aa23.86■■□□□ 1.41
USP4-208ENST00000464168 CYP26A1O43174 497 aa23.86■■□□□ 1.41
USP4-208ENST00000464168 F13A1P00488 732 aa23.86■■□□□ 1.41
USP4-208ENST00000464168 HLA-DRAP01903 254 aa23.86■■□□□ 1.41
USP4-208ENST00000464168 SERPINF2P08697 491 aa23.86■■□□□ 1.41
USP4-208ENST00000464168 ZNF33AQ06730 810 aa23.86■■□□□ 1.41
USP4-208ENST00000464168 CLEC20AQ6ZU45 233 aa23.86■■□□□ 1.41
USP4-208ENST00000464168 ERLEC1Q96DZ1 483 aa23.86■■□□□ 1.41
USP4-208ENST00000464168 TWNKQ96RR1 684 aa23.86■■□□□ 1.41
USP4-208ENST00000464168 GABRG3Q99928 467 aa23.86■■□□□ 1.41
USP4-208ENST00000464168 NMUR1Q9HB89 426 aa23.86■■□□□ 1.41
USP4-208ENST00000464168 DSPP15924 2871 aaKnown RBP23.85■■□□□ 1.41
USP4-208ENST00000464168 CISD3P0C7P0 127 aa23.85■■□□□ 1.41
USP4-208ENST00000464168 NDUFV2P19404 249 aa23.85■■□□□ 1.41
USP4-208ENST00000464168 ACO1P21399 889 aaKnown RBP23.85■■□□□ 1.41
USP4-208ENST00000464168 GFPT1Q06210 699 aaPredicted RBP23.85■■□□□ 1.41
USP4-208ENST00000464168 INCA1Q0VD86 236 aa23.85■■□□□ 1.41
USP4-208ENST00000464168 ATL3Q6DD88 541 aa23.85■■□□□ 1.41
USP4-208ENST00000464168 SDE2Q6IQ49 451 aa23.85■■□□□ 1.41
USP4-208ENST00000464168 KLHDC10Q6PID8 442 aa23.85■■□□□ 1.41
USP4-208ENST00000464168 SLC41A1Q8IVJ1 513 aa23.85■■□□□ 1.41
USP4-208ENST00000464168 JAKMIP2Q96AA8 810 aa23.85■■□□□ 1.41
USP4-208ENST00000464168 CYFIP2Q96F07 1278 aa23.85■■□□□ 1.41
USP4-208ENST00000464168 GTPBP2Q9BX10 602 aaKnown RBP23.85■■□□□ 1.41
USP4-208ENST00000464168 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.85■■□□□ 1.41
USP4-208ENST00000464168 LSM7Q9UK45 103 aaKnown RBP23.85■■□□□ 1.41
USP4-208ENST00000464168 NUDT5Q9UKK9 219 aa23.85■■□□□ 1.41
USP4-208ENST00000464168 RCOR1Q9UKL0 485 aa23.85■■□□□ 1.41
USP4-208ENST00000464168 ATRXP46100 2492 aa23.85■■□□□ 1.41
USP4-208ENST00000464168 SPAARA0A1B0GVQ0 90 aa23.84■■□□□ 1.41
USP4-208ENST00000464168 A0A1W2PQH9 124 aa23.84■■□□□ 1.41
USP4-208ENST00000464168 MDM4O15151 490 aa23.84■■□□□ 1.41
USP4-208ENST00000464168 ZBTB24O43167 697 aaPredicted RBP23.84■■□□□ 1.41
USP4-208ENST00000464168 ZNF217O75362 1048 aa23.84■■□□□ 1.41
USP4-208ENST00000464168 PDIA4P13667 645 aaKnown RBP23.84■■□□□ 1.41
USP4-208ENST00000464168 GOLGA8FQ08AF8 430 aa23.84■■□□□ 1.41
USP4-208ENST00000464168 GOLGA8DPQ0D2H9 430 aa23.84■■□□□ 1.41
USP4-208ENST00000464168 CEP135Q66GS9 1140 aa23.84■■□□□ 1.41
USP4-208ENST00000464168 Q6ZNB5 142 aa23.84■■□□□ 1.41
USP4-208ENST00000464168 SNX21Q969T3 373 aa23.84■■□□□ 1.41
USP4-208ENST00000464168 P2RY11Q96G91 374 aa23.84■■□□□ 1.41
USP4-208ENST00000464168 APOBEC3GQ9HC16 384 aaKnown RBP23.84■■□□□ 1.41
USP4-208ENST00000464168 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.84■■□□□ 1.41
USP4-208ENST00000464168 DNMT3LQ9UJW3 386 aa23.84■■□□□ 1.41
USP4-208ENST00000464168 CYP8B1Q9UNU6 501 aa23.84■■□□□ 1.41
USP4-208ENST00000464168 RARGP13631 454 aa23.83■■□□□ 1.41
USP4-208ENST00000464168 PIK3CAP42336 1068 aa23.83■■□□□ 1.41
USP4-208ENST00000464168 PLA2G4AP47712 749 aa23.83■■□□□ 1.41
USP4-208ENST00000464168 DGKGP49619 791 aa23.83■■□□□ 1.41
USP4-208ENST00000464168 ATXN3P54252 364 aaPredicted RBP23.83■■□□□ 1.41
USP4-208ENST00000464168 RABEPKQ7Z6M1 372 aa23.83■■□□□ 1.41
USP4-208ENST00000464168 TRIML1Q8N9V2 468 aa23.83■■□□□ 1.41
USP4-208ENST00000464168 NT5C1AQ9BXI3 368 aa23.83■■□□□ 1.41
USP4-208ENST00000464168 SLC6A17Q9H1V8 727 aa23.83■■□□□ 1.41
USP4-208ENST00000464168 PNPLA8Q9NP80 782 aa23.83■■□□□ 1.41
USP4-208ENST00000464168 CACNA2D2Q9NY47 1150 aa23.83■■□□□ 1.41
USP4-208ENST00000464168 FBXO10Q9UK96 956 aa23.83■■□□□ 1.41
USP4-208ENST00000464168 CFAP45Q9UL16 551 aa23.83■■□□□ 1.41
USP4-208ENST00000464168 FRMD4BQ9Y2L6 1034 aa23.83■■□□□ 1.41
USP4-208ENST00000464168 PCDHA5Q9Y5H7 936 aa23.83■■□□□ 1.41
USP4-208ENST00000464168 RAD54BQ9Y620 910 aa23.83■■□□□ 1.41
USP4-208ENST00000464168 TMEM8BA6NDV4 472 aa23.82■■□□□ 1.4
USP4-208ENST00000464168 WASH3PC4AMC7 463 aa23.82■■□□□ 1.4
USP4-208ENST00000464168 HYAL3O43820 417 aaPredicted RBP23.82■■□□□ 1.4
USP4-208ENST00000464168 VAMP7P51809 220 aa23.82■■□□□ 1.4
USP4-208ENST00000464168 KIF11P52732 1056 aa23.82■■□□□ 1.4
USP4-208ENST00000464168 SIM1P81133 766 aaPredicted RBP23.82■■□□□ 1.4
USP4-208ENST00000464168 DNM1Q05193 864 aaKnown RBP23.82■■□□□ 1.4
USP4-208ENST00000464168 PKP1Q13835 747 aa23.82■■□□□ 1.4
USP4-208ENST00000464168 C10orf120Q5SQS8 335 aa23.82■■□□□ 1.4
USP4-208ENST00000464168 SCD5Q86SK9 330 aa23.82■■□□□ 1.4
USP4-208ENST00000464168 HDDC3Q8N4P3 179 aa23.82■■□□□ 1.4
USP4-208ENST00000464168 BHMTQ93088 406 aa23.82■■□□□ 1.4
USP4-208ENST00000464168 MRGPRX1Q96LB2 322 aa23.82■■□□□ 1.4
USP4-208ENST00000464168 HSPA12BQ96MM6 686 aa23.82■■□□□ 1.4
USP4-208ENST00000464168 CYP3A43Q9HB55 503 aa23.82■■□□□ 1.4
USP4-208ENST00000464168 CD93Q9NPY3 652 aa23.82■■□□□ 1.4
USP4-208ENST00000464168 PLK2Q9NYY3 685 aa23.82■■□□□ 1.4
USP4-208ENST00000464168 GFRA2O00451 464 aa23.81■■□□□ 1.4
USP4-208ENST00000464168 ARHGAP33O14559 1287 aa23.81■■□□□ 1.4
USP4-208ENST00000464168 OPHN1O60890 802 aa23.81■■□□□ 1.4
USP4-208ENST00000464168 STC2O76061 302 aa23.81■■□□□ 1.4
USP4-208ENST00000464168 ZNF276Q8N554 614 aa23.81■■□□□ 1.4
USP4-208ENST00000464168 MINDY1Q8N5J2 469 aa23.81■■□□□ 1.4
USP4-208ENST00000464168 OR2I1PQ8NGU4 316 aa23.81■■□□□ 1.4
USP4-208ENST00000464168 ZNF419Q96HQ0 510 aaPredicted RBP23.81■■□□□ 1.4
USP4-208ENST00000464168 TRAF3IP3Q9Y228 551 aa23.81■■□□□ 1.4
USP4-208ENST00000464168 NEUROG3Q9Y4Z2 214 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms