RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 TRMOQ9BU70 441 aa4.96□□□□□ -1.62
ITGB1-208ENST00000464001 USP29Q9HBJ7 922 aa4.96□□□□□ -1.62
ITGB1-208ENST00000464001 ZNF287Q9HBT7 754 aa4.96□□□□□ -1.62
ITGB1-208ENST00000464001 COL20A1Q9P218 1284 aa4.96□□□□□ -1.62
ITGB1-208ENST00000464001 ITGB1BP2Q9UKP3 347 aa4.96□□□□□ -1.62
ITGB1-208ENST00000464001 ASAP1Q9ULH1 1129 aa4.96□□□□□ -1.62
ITGB1-208ENST00000464001 RIMKLBQ9ULI2 386 aa4.96□□□□□ -1.62
ITGB1-208ENST00000464001 HS3ST3B1Q9Y662 390 aa4.96□□□□□ -1.62
ITGB1-208ENST00000464001 CD8B2A6NJW9 211 aa4.95□□□□□ -1.62
ITGB1-208ENST00000464001 FYB1O15117 783 aa4.95□□□□□ -1.62
ITGB1-208ENST00000464001 CYP19A1P11511 503 aaPredicted RBP4.95□□□□□ -1.62
ITGB1-208ENST00000464001 BTF3P20290 206 aaKnown RBP4.95□□□□□ -1.62
ITGB1-208ENST00000464001 CCKARP32238 428 aa4.95□□□□□ -1.62
ITGB1-208ENST00000464001 EIF4A1P60842 406 aaKnown RBP4.95□□□□□ -1.62
ITGB1-208ENST00000464001 DEUP1Q05D60 604 aa4.95□□□□□ -1.62
ITGB1-208ENST00000464001 SLC14A1Q13336 389 aa4.95□□□□□ -1.62
ITGB1-208ENST00000464001 STIM1Q13586 685 aa4.95□□□□□ -1.62
ITGB1-208ENST00000464001 POLD3Q15054 466 aaPredicted RBP4.95□□□□□ -1.62
ITGB1-208ENST00000464001 KLHL22Q53GT1 634 aa4.95□□□□□ -1.62
ITGB1-208ENST00000464001 RUSC1-AS1Q66K80 236 aa4.95□□□□□ -1.62
ITGB1-208ENST00000464001 PLAG1Q6DJT9 500 aa4.95□□□□□ -1.62
ITGB1-208ENST00000464001 CLEC9AQ6UXN8 241 aa4.95□□□□□ -1.62
ITGB1-208ENST00000464001 USP49Q70CQ1 688 aa4.95□□□□□ -1.62
ITGB1-208ENST00000464001 SMC5Q8IY18 1101 aa4.95□□□□□ -1.62
ITGB1-208ENST00000464001 ARFGAP1Q8N6T3 406 aa4.95□□□□□ -1.62
ITGB1-208ENST00000464001 APIPQ96GX9 242 aa4.95□□□□□ -1.62
ITGB1-208ENST00000464001 KAZALD1Q96I82 304 aa4.95□□□□□ -1.62
ITGB1-208ENST00000464001 ZFYVE19Q96K21 471 aa4.95□□□□□ -1.62
ITGB1-208ENST00000464001 CINPQ9BW66 212 aaPredicted RBP4.95□□□□□ -1.62
ITGB1-208ENST00000464001 HEY2Q9UBP5 337 aa4.95□□□□□ -1.62
ITGB1-208ENST00000464001 DNAJB11Q9UBS4 358 aa4.95□□□□□ -1.62
ITGB1-208ENST00000464001 ZNF580Q9UK33 172 aa4.95□□□□□ -1.62
ITGB1-208ENST00000464001 FZD4Q9ULV1 537 aa4.95□□□□□ -1.62
ITGB1-208ENST00000464001 IGKV2D-30A0A075B6S6 120 aa4.94□□□□□ -1.62
ITGB1-208ENST00000464001 H3BNX3 289 aa4.94□□□□□ -1.62
ITGB1-208ENST00000464001 MGEA5O60502 916 aa4.94□□□□□ -1.62
ITGB1-208ENST00000464001 CD63P08962 238 aa4.94□□□□□ -1.62
ITGB1-208ENST00000464001 MYF5P13349 255 aa4.94□□□□□ -1.62
ITGB1-208ENST00000464001 YPEL5P62699 121 aa4.94□□□□□ -1.62
ITGB1-208ENST00000464001 GPC5P78333 572 aa4.94□□□□□ -1.62
ITGB1-208ENST00000464001 CLCA4Q14CN2 919 aa4.94□□□□□ -1.62
ITGB1-208ENST00000464001 LEXMQ3ZCV2 418 aa4.94□□□□□ -1.62
ITGB1-208ENST00000464001 NXNQ6DKJ4 435 aa4.94□□□□□ -1.62
ITGB1-208ENST00000464001 DARS2Q6PI48 645 aaKnown RBP4.94□□□□□ -1.62
ITGB1-208ENST00000464001 CCDC149Q6ZUS6 474 aa4.94□□□□□ -1.62
ITGB1-208ENST00000464001 TCEAL8Q8IYN2 117 aa4.94□□□□□ -1.62
ITGB1-208ENST00000464001 SDR16C5Q8N3Y7 309 aa4.94□□□□□ -1.62
ITGB1-208ENST00000464001 MPLKIPQ8TAP9 179 aa4.94□□□□□ -1.62
ITGB1-208ENST00000464001 EVI5LQ96CN4 794 aa4.94□□□□□ -1.62
ITGB1-208ENST00000464001 ZDHHC12Q96GR4 267 aa4.94□□□□□ -1.62
ITGB1-208ENST00000464001 SLC27A6Q9Y2P4 619 aa4.94□□□□□ -1.62
ITGB1-208ENST00000464001 THRAP3Q9Y2W1 955 aaKnown RBP4.94□□□□□ -1.62
ITGB1-208ENST00000464001 SQORQ9Y6N5 450 aa4.94□□□□□ -1.62
ITGB1-208ENST00000464001 INPPL1O15357 1258 aa4.93□□□□□ -1.62
ITGB1-208ENST00000464001 USP12O75317 370 aa4.93□□□□□ -1.62
ITGB1-208ENST00000464001 TULP3O75386 442 aa4.93□□□□□ -1.62
ITGB1-208ENST00000464001 IL1R1P14778 569 aa4.93□□□□□ -1.62
ITGB1-208ENST00000464001 NTSR1P30989 418 aa4.93□□□□□ -1.62
ITGB1-208ENST00000464001 CPA2P48052 419 aa4.93□□□□□ -1.62
ITGB1-208ENST00000464001 CARSP49589 748 aaKnown RBP4.93□□□□□ -1.62
ITGB1-208ENST00000464001 CCDC15Q0P6D6 951 aa4.93□□□□□ -1.62
ITGB1-208ENST00000464001 PPP2R5AQ15172 486 aa4.93□□□□□ -1.62
ITGB1-208ENST00000464001 PPP4R4Q6NUP7 873 aa4.93□□□□□ -1.62
ITGB1-208ENST00000464001 UNC13DQ70J99 1090 aa4.93□□□□□ -1.62
ITGB1-208ENST00000464001 SRGAP1Q7Z6B7 1085 aa4.93□□□□□ -1.62
ITGB1-208ENST00000464001 SESTD1Q86VW0 696 aa4.93□□□□□ -1.62
ITGB1-208ENST00000464001 MAGEB6Q8N7X4 407 aa4.93□□□□□ -1.62
ITGB1-208ENST00000464001 WASF1Q92558 559 aa4.93□□□□□ -1.62
ITGB1-208ENST00000464001 BRIP1Q9BX63 1249 aa4.93□□□□□ -1.62
ITGB1-208ENST00000464001 ADGRE3Q9BY15 652 aa4.93□□□□□ -1.62
ITGB1-208ENST00000464001 NUAK2Q9H093 628 aa4.93□□□□□ -1.62
ITGB1-208ENST00000464001 ARL8BQ9NVJ2 186 aa4.93□□□□□ -1.62
ITGB1-208ENST00000464001 CAPN11Q9UMQ6 739 aa4.93□□□□□ -1.62
ITGB1-208ENST00000464001 SPATA31A1Q5TZJ5 1347 aa4.93□□□□□ -1.62
ITGB1-208ENST00000464001 A6NNZ2 444 aa4.92□□□□□ -1.62
ITGB1-208ENST00000464001 GOLIM4O00461 696 aa4.92□□□□□ -1.62
ITGB1-208ENST00000464001 CRYABP02511 175 aaKnown RBP4.92□□□□□ -1.62
ITGB1-208ENST00000464001 TMEM225BP0DP42 221 aa4.92□□□□□ -1.62
ITGB1-208ENST00000464001 PSG1P11464 419 aa4.92□□□□□ -1.62
ITGB1-208ENST00000464001 RBL1P28749 1068 aa4.92□□□□□ -1.62
ITGB1-208ENST00000464001 KCNAB1Q14722 419 aa4.92□□□□□ -1.62
ITGB1-208ENST00000464001 NFE2Q16621 373 aaPredicted RBP4.92□□□□□ -1.62
ITGB1-208ENST00000464001 KIAA0753Q2KHM9 967 aa4.92□□□□□ -1.62
ITGB1-208ENST00000464001 MIDNQ504T8 468 aa4.92□□□□□ -1.62
ITGB1-208ENST00000464001 FMNL3Q8IVF7 1028 aa4.92□□□□□ -1.62
ITGB1-208ENST00000464001 P3H2Q8IVL5 708 aa4.92□□□□□ -1.62
ITGB1-208ENST00000464001 ZNF548Q8NEK5 533 aaPredicted RBP4.92□□□□□ -1.62
ITGB1-208ENST00000464001 MARK4Q96L34 752 aa4.92□□□□□ -1.62
ITGB1-208ENST00000464001 ZNF212Q9UDV6 495 aa4.92□□□□□ -1.62
ITGB1-208ENST00000464001 VPS51Q9UID3 782 aa4.92□□□□□ -1.62
ITGB1-208ENST00000464001 SCGB1D2O95969 90 aa4.91□□□□□ -1.62
ITGB1-208ENST00000464001 ZBED1O96006 694 aa4.91□□□□□ -1.62
ITGB1-208ENST00000464001 HRGP04196 525 aa4.91□□□□□ -1.62
ITGB1-208ENST00000464001 S100BP04271 92 aaPredicted RBP4.91□□□□□ -1.62
ITGB1-208ENST00000464001 CENPBP07199 599 aaPredicted RBP4.91□□□□□ -1.62
ITGB1-208ENST00000464001 RPL17P18621 184 aaKnown RBP4.91□□□□□ -1.62
ITGB1-208ENST00000464001 JAK3P52333 1124 aa4.91□□□□□ -1.62
ITGB1-208ENST00000464001 COPAP53621 1224 aa4.91□□□□□ -1.62
ITGB1-208ENST00000464001 FAM193AP78312 1265 aa4.91□□□□□ -1.62
ITGB1-208ENST00000464001 KPNB1Q14974 876 aaKnown RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms