RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 SUSD6Q92537 303 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 UBE2FQ969M7 185 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 KLHL5Q96PQ7 755 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 FAM193BQ96PV7 902 aaPredicted RBP6.16□□□□□ -1.42
VPS36-202ENST00000462289 TCF25Q9BQ70 676 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 BPIFA3Q9BQP9 254 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 TTPALQ9BTX7 342 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 MTMR12Q9C0I1 747 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 S1PR5Q9H228 398 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 FBXW11Q9UKB1 542 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 SSX2IPQ9Y2D8 614 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 PRG3Q9Y2Y8 225 aaPredicted RBP6.16□□□□□ -1.42
VPS36-202ENST00000462289 NME7Q9Y5B8 376 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 HCFC2Q9Y5Z7 792 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 MYH10P35580 1976 aa6.16□□□□□ -1.42
VPS36-202ENST00000462289 HELZP42694 1942 aaKnown RBP6.15□□□□□ -1.42
VPS36-202ENST00000462289 TCF20Q9UGU0 1960 aaKnown RBP6.15□□□□□ -1.42
VPS36-202ENST00000462289 BICDL2A1A5D9 508 aa6.15□□□□□ -1.42
VPS36-202ENST00000462289 ARHGEF37A1IGU5 675 aa6.15□□□□□ -1.42
VPS36-202ENST00000462289 GTPBP10A4D1E9 387 aaKnown RBP6.15□□□□□ -1.42
VPS36-202ENST00000462289 KPNA7A9QM74 516 aa6.15□□□□□ -1.42
VPS36-202ENST00000462289 CETN3O15182 167 aa6.15□□□□□ -1.42
VPS36-202ENST00000462289 ADAM12O43184 909 aa6.15□□□□□ -1.42
VPS36-202ENST00000462289 TRAPPC3O43617 180 aa6.15□□□□□ -1.42
VPS36-202ENST00000462289 GNA14O95837 355 aa6.15□□□□□ -1.42
VPS36-202ENST00000462289 ESR1P03372 595 aa6.15□□□□□ -1.42
VPS36-202ENST00000462289 ITGB3P05106 788 aa6.15□□□□□ -1.42
VPS36-202ENST00000462289 TFE3P19532 575 aaPredicted RBP6.15□□□□□ -1.42
VPS36-202ENST00000462289 PTMSP20962 102 aa6.15□□□□□ -1.42
VPS36-202ENST00000462289 POLR2BP30876 1174 aaKnown RBP6.15□□□□□ -1.42
VPS36-202ENST00000462289 GTF2F1P35269 517 aaKnown RBP eCLIP6.15□□□□□ -1.42
VPS36-202ENST00000462289 NDUFV1P49821 464 aa6.15□□□□□ -1.42
VPS36-202ENST00000462289 TAF6P49848 677 aa6.15□□□□□ -1.42
VPS36-202ENST00000462289 VAMP7P51809 220 aa6.15□□□□□ -1.42
VPS36-202ENST00000462289 RBP5P82980 135 aa6.15□□□□□ -1.42
VPS36-202ENST00000462289 DLX2Q07687 328 aaPredicted RBP6.15□□□□□ -1.42
VPS36-202ENST00000462289 INCA1Q0VD86 236 aa6.15□□□□□ -1.42
VPS36-202ENST00000462289 STIM1Q13586 685 aa6.15□□□□□ -1.42
VPS36-202ENST00000462289 SOWAHAQ2M3V2 549 aa6.15□□□□□ -1.42
VPS36-202ENST00000462289 LEXMQ3ZCV2 418 aa6.15□□□□□ -1.42
VPS36-202ENST00000462289 FAM171A1Q5VUB5 890 aa6.15□□□□□ -1.42
VPS36-202ENST00000462289 FAM171BQ6P995 826 aa6.15□□□□□ -1.42
VPS36-202ENST00000462289 SYCE2Q6PIF2 218 aa6.15□□□□□ -1.42
VPS36-202ENST00000462289 CYP26C1Q6V0L0 522 aa6.15□□□□□ -1.42
VPS36-202ENST00000462289 PRR23BQ6ZRT6 265 aa6.15□□□□□ -1.42
VPS36-202ENST00000462289 TMPRSS7Q7RTY8 843 aa6.15□□□□□ -1.42
VPS36-202ENST00000462289 PPFIBP1Q86W92 1011 aa6.15□□□□□ -1.42
VPS36-202ENST00000462289 FAM186BQ8IYM0 893 aa6.15□□□□□ -1.42
VPS36-202ENST00000462289 TMEM86AQ8N2M4 240 aa6.15□□□□□ -1.42
VPS36-202ENST00000462289 RABGGTAQ92696 567 aa6.15□□□□□ -1.42
VPS36-202ENST00000462289 TAF4BQ92750 862 aa6.15□□□□□ -1.42
VPS36-202ENST00000462289 SENP8Q96LD8 212 aa6.15□□□□□ -1.42
VPS36-202ENST00000462289 ZNF560Q96MR9 790 aa6.15□□□□□ -1.42
VPS36-202ENST00000462289 FAM161BQ96MY7 647 aa6.15□□□□□ -1.42
VPS36-202ENST00000462289 MIR1-1HGQ9H1L0 117 aa6.15□□□□□ -1.42
VPS36-202ENST00000462289 METTL14Q9HCE5 456 aaKnown RBP6.15□□□□□ -1.42
VPS36-202ENST00000462289 TMEM8AQ9HCN3 771 aa6.15□□□□□ -1.42
VPS36-202ENST00000462289 MRPL17Q9NRX2 175 aaKnown RBP6.15□□□□□ -1.42
VPS36-202ENST00000462289 ADAM30Q9UKF2 790 aa6.15□□□□□ -1.42
VPS36-202ENST00000462289 DSEQ9UL01 958 aa6.15□□□□□ -1.42
VPS36-202ENST00000462289 L1RE1Q9UN81 338 aa6.15□□□□□ -1.42
VPS36-202ENST00000462289 COG5Q9UP83 839 aa6.15□□□□□ -1.42
VPS36-202ENST00000462289 FRMD4BQ9Y2L6 1034 aa6.15□□□□□ -1.42
VPS36-202ENST00000462289 COL4A2P08572 1712 aa6.14□□□□□ -1.43
VPS36-202ENST00000462289 WDR27A2RRH5 827 aa6.14□□□□□ -1.43
VPS36-202ENST00000462289 OR6C75A6NL08 312 aa6.14□□□□□ -1.43
VPS36-202ENST00000462289 TADA2AO75478 443 aa6.14□□□□□ -1.43
VPS36-202ENST00000462289 CXCL14O95715 111 aa6.14□□□□□ -1.43
VPS36-202ENST00000462289 KRT1P04264 644 aa6.14□□□□□ -1.43
VPS36-202ENST00000462289 URODP06132 367 aa6.14□□□□□ -1.43
VPS36-202ENST00000462289 PGRP06401 933 aa6.14□□□□□ -1.43
VPS36-202ENST00000462289 ATF2P15336 505 aa6.14□□□□□ -1.43
VPS36-202ENST00000462289 HOXB8P17481 243 aaPredicted RBP6.14□□□□□ -1.43
VPS36-202ENST00000462289 WARSP23381 471 aaKnown RBP6.14□□□□□ -1.43
VPS36-202ENST00000462289 MATR3P43243 847 aaKnown RBP eCLIP6.14□□□□□ -1.43
VPS36-202ENST00000462289 RAP1GAPP47736 663 aa6.14□□□□□ -1.43
VPS36-202ENST00000462289 EPHA5P54756 1037 aa6.14□□□□□ -1.43
VPS36-202ENST00000462289 TFAMQ00059 246 aaKnown RBP6.14□□□□□ -1.43
VPS36-202ENST00000462289 ROR1Q01973 937 aa6.14□□□□□ -1.43
VPS36-202ENST00000462289 RPL6Q02878 288 aaKnown RBP6.14□□□□□ -1.43
VPS36-202ENST00000462289 SMARCB1Q12824 385 aa6.14□□□□□ -1.43
VPS36-202ENST00000462289 GPR17Q13304 367 aa6.14□□□□□ -1.43
VPS36-202ENST00000462289 IQCB1Q15051 598 aa6.14□□□□□ -1.43
VPS36-202ENST00000462289 PSMD5Q16401 504 aa6.14□□□□□ -1.43
VPS36-202ENST00000462289 TSNAXIP1Q2TAA8 658 aa6.14□□□□□ -1.43
VPS36-202ENST00000462289 SV2CQ496J9 727 aa6.14□□□□□ -1.43
VPS36-202ENST00000462289 CBWD6Q4V339 395 aa6.14□□□□□ -1.43
VPS36-202ENST00000462289 CBWD3Q5JTY5 395 aa6.14□□□□□ -1.43
VPS36-202ENST00000462289 MIIPQ5JXC2 388 aa6.14□□□□□ -1.43
VPS36-202ENST00000462289 CBWD5Q5RIA9 395 aa6.14□□□□□ -1.43
VPS36-202ENST00000462289 SPOUT1Q5T280 376 aaKnown RBP6.14□□□□□ -1.43
VPS36-202ENST00000462289 TPGS2Q68CL5 300 aa6.14□□□□□ -1.43
VPS36-202ENST00000462289 KRT39Q6A163 491 aa6.14□□□□□ -1.43
VPS36-202ENST00000462289 PRSS55Q6UWB4 352 aaPredicted RBP6.14□□□□□ -1.43
VPS36-202ENST00000462289 USP37Q86T82 979 aa6.14□□□□□ -1.43
VPS36-202ENST00000462289 CDH24Q86UP0 819 aa6.14□□□□□ -1.43
VPS36-202ENST00000462289 C1QL4Q86Z23 238 aa6.14□□□□□ -1.43
VPS36-202ENST00000462289 TCEAL8Q8IYN2 117 aa6.14□□□□□ -1.43
VPS36-202ENST00000462289 PDCL2Q8N4E4 241 aa6.14□□□□□ -1.43
VPS36-202ENST00000462289 CSGALNACT2Q8N6G5 542 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms