RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 RSL24D1Q9UHA3 163 aaKnown RBP13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 SSX2IPQ9Y2D8 614 aa13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 SPATA31C2B4DYI2 1134 aa13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 STIP1P31948 543 aaKnown RBP13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 RASA2Q15283 850 aa13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 RCOR2Q8IZ40 523 aa13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 GSTCDQ8NEC7 633 aa13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 VCPIP1Q96JH7 1222 aa13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 IMPG2Q9BZV3 1241 aa13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 FHDC1Q9C0D6 1143 aaPredicted RBP13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 PCIF1Q9H4Z3 704 aa13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 PCDHB2Q9Y5E7 798 aa13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 C2orf71A6NGG8 1288 aa13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 TNFAIP8O95379 198 aa13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 TRPC1P48995 793 aa13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 NR1H2P55055 460 aa13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 KDSRQ06136 332 aa13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 LGSNQ5TDP6 509 aa13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 RNF111Q6ZNA4 994 aa13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 HAUS6Q7Z4H7 955 aa13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 MARVELD2Q8N4S9 558 aa13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 ZCCHC9Q8N567 271 aaKnown RBP13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 ZSWIM2Q8NEG5 633 aa13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 DDHD1Q8NEL9 900 aa13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 NSUN6Q8TEA1 469 aaKnown RBP13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 CD101Q93033 1021 aa13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 SH2D3AQ9BRG2 576 aa13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 SAYSD1Q9NPB0 183 aa13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 GPRC5CQ9NQ84 441 aa13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 PSMC3IPQ9P2W1 217 aaPredicted RBP13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 NOX1Q9Y5S8 564 aa13.95□□□□□ -0.18
SYNGAP1-204ENST00000449372 SGPL1O95470 568 aa13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 STAMBPO95630 424 aa13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 VGLL4Q14135 290 aa13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 CLEC16AQ2KHT3 1053 aa13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 TTC13Q8NBP0 860 aa13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 EXD1Q8NHP7 514 aa13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 CXorf38Q8TB03 319 aa13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 NSMCE3Q96MG7 304 aa13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 GPATCH1Q9BRR8 931 aaKnown RBP13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 SSU72Q9NP77 194 aaKnown RBP13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 RABL2AQ9UBK7 228 aaPredicted RBP13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 TESPA1A2RU30 521 aaPredicted RBP13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 STAM2O75886 525 aa13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 PHKA2P46019 1235 aa13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 SP2Q02086 613 aa13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 TAP1Q03518 808 aa13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 ZBTB17Q13105 803 aa13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 LLGL1Q15334 1064 aa13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 MDH1BQ5I0G3 518 aa13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 PLA2G4FQ68DD2 849 aa13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 ALLCQ8N6M5 410 aa13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 OXNAD1Q96HP4 312 aaPredicted RBP13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 ADAM33Q9BZ11 813 aa13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 NMUR2Q9GZQ4 415 aa13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 ACAD9Q9H845 621 aa13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 IP6K2Q9UHH9 426 aa13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 PCDHA10Q9Y5I2 948 aa13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 MAD1L1Q9Y6D9 718 aa13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 IQCA1LA6NCM1 817 aa13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 TKTP29401 623 aaKnown RBP13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 TCF7P36402 384 aaPredicted RBP13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 PPARGP37231 505 aaPredicted RBP13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 FDFT1P37268 417 aa13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 DLG4P78352 724 aa13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 DNAL1Q4LDG9 190 aa13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 TREML2Q5T2D2 321 aa13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 ABHD15Q6UXT9 468 aa13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 TMEM161BQ8NDZ6 487 aa13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 RAB3IL1Q8TBN0 382 aa13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 CCDC127Q96BQ5 260 aa13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 Q9H521 79 aa13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 C17orf75Q9HAS0 396 aa13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 HOXC10Q9NYD6 342 aa13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 PLA2G4CQ9UP65 541 aa13.94□□□□□ -0.18
SYNGAP1-204ENST00000449372 ARHGAP42A6NI28 874 aa13.93□□□□□ -0.18
SYNGAP1-204ENST00000449372 ATG7O95352 703 aa13.93□□□□□ -0.18
SYNGAP1-204ENST00000449372 CDH3P22223 829 aa13.93□□□□□ -0.18
SYNGAP1-204ENST00000449372 ADSSP30520 456 aa13.93□□□□□ -0.18
SYNGAP1-204ENST00000449372 GPC3P51654 580 aa13.93□□□□□ -0.18
SYNGAP1-204ENST00000449372 GCNT1Q02742 428 aa13.93□□□□□ -0.18
SYNGAP1-204ENST00000449372 MORF4L2Q15014 288 aa13.93□□□□□ -0.18
SYNGAP1-204ENST00000449372 SUPT20HL1Q3ZLR7 823 aa13.93□□□□□ -0.18
SYNGAP1-204ENST00000449372 ELMSAN1Q6PJG2 1045 aa13.93□□□□□ -0.18
SYNGAP1-204ENST00000449372 LBX2Q6XYB7 198 aa13.93□□□□□ -0.18
SYNGAP1-204ENST00000449372 DCDC5Q6ZRR9 648 aa13.93□□□□□ -0.18
SYNGAP1-204ENST00000449372 TMCO5AQ8N6Q1 288 aa13.93□□□□□ -0.18
SYNGAP1-204ENST00000449372 MRRFQ96E11 262 aaKnown RBP13.93□□□□□ -0.18
SYNGAP1-204ENST00000449372 BIRC8Q96P09 236 aa13.93□□□□□ -0.18
SYNGAP1-204ENST00000449372 DDX56Q9NY93 547 aaKnown RBP13.93□□□□□ -0.18
SYNGAP1-204ENST00000449372 SCHIP1Q9P0W5 487 aaPredicted RBP13.93□□□□□ -0.18
SYNGAP1-204ENST00000449372 DKK3Q9UBP4 350 aa13.93□□□□□ -0.18
SYNGAP1-204ENST00000449372 RBMX2Q9Y388 322 aaKnown RBP13.93□□□□□ -0.18
SYNGAP1-204ENST00000449372 MYH9P35579 1960 aaKnown RBP13.93□□□□□ -0.18
SYNGAP1-204ENST00000449372 MYOCOSA0A1B0GUC4 107 aa13.93□□□□□ -0.18
SYNGAP1-204ENST00000449372 CAPN8A6NHC0 703 aa13.93□□□□□ -0.18
SYNGAP1-204ENST00000449372 ITM2AO43736 263 aa13.93□□□□□ -0.18
SYNGAP1-204ENST00000449372 PROSCO94903 275 aa13.93□□□□□ -0.18
SYNGAP1-204ENST00000449372 ADRA1DP25100 572 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms