RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 DCAKDQ8WVC6 231 aa16.92■□□□□ 0.3
OTUB1-204ENST00000447683 DNAI2Q9GZS0 605 aa16.92■□□□□ 0.3
OTUB1-204ENST00000447683 ARL2BPQ9Y2Y0 163 aa16.92■□□□□ 0.3
OTUB1-204ENST00000447683 IPPQ9Y573 584 aa16.92■□□□□ 0.3
OTUB1-204ENST00000447683 HEY1Q9Y5J3 304 aa16.92■□□□□ 0.3
OTUB1-204ENST00000447683 NEBLO76041 1014 aa16.91■□□□□ 0.3
OTUB1-204ENST00000447683 MYL3P08590 195 aa16.91■□□□□ 0.3
OTUB1-204ENST00000447683 CYP2F1P24903 491 aa16.91■□□□□ 0.3
OTUB1-204ENST00000447683 CCL14Q16627 93 aa16.91■□□□□ 0.3
OTUB1-204ENST00000447683 MRRFQ96E11 262 aaKnown RBP16.91■□□□□ 0.3
OTUB1-204ENST00000447683 GOLGA2P5Q9HBQ8 144 aa16.91■□□□□ 0.3
OTUB1-204ENST00000447683 ABCF3Q9NUQ8 709 aa16.91■□□□□ 0.3
OTUB1-204ENST00000447683 MTMR10Q9NXD2 777 aa16.91■□□□□ 0.3
OTUB1-204ENST00000447683 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.91■□□□□ 0.3
OTUB1-204ENST00000447683 CHMP2BQ9UQN3 213 aa16.91■□□□□ 0.3
OTUB1-204ENST00000447683 TRPM7Q96QT4 1865 aa16.91■□□□□ 0.3
OTUB1-204ENST00000447683 C17orf102A2RUQ5 167 aa16.91■□□□□ 0.3
OTUB1-204ENST00000447683 SPAG6O75602 509 aa16.91■□□□□ 0.3
OTUB1-204ENST00000447683 ZBED1O96006 694 aa16.91■□□□□ 0.3
OTUB1-204ENST00000447683 LCP1P13796 627 aa16.91■□□□□ 0.3
OTUB1-204ENST00000447683 WARSP23381 471 aaKnown RBP16.91■□□□□ 0.3
OTUB1-204ENST00000447683 RPA3P35244 121 aaPredicted RBP16.91■□□□□ 0.3
OTUB1-204ENST00000447683 XRCC4Q13426 336 aa16.91■□□□□ 0.3
OTUB1-204ENST00000447683 C4orf22Q6V702 233 aa16.91■□□□□ 0.3
OTUB1-204ENST00000447683 ADGRF2Q8IZF7 708 aa16.91■□□□□ 0.3
OTUB1-204ENST00000447683 ARRDC4Q8NCT1 418 aa16.91■□□□□ 0.3
OTUB1-204ENST00000447683 ARMC2Q8NEN0 867 aa16.91■□□□□ 0.3
OTUB1-204ENST00000447683 SLC2A14Q8TDB8 520 aa16.91■□□□□ 0.3
OTUB1-204ENST00000447683 TNIP3Q96KP6 325 aa16.91■□□□□ 0.3
OTUB1-204ENST00000447683 KATNAL1Q9BW62 490 aa16.91■□□□□ 0.3
OTUB1-204ENST00000447683 AP5M1Q9H0R1 490 aa16.91■□□□□ 0.3
OTUB1-204ENST00000447683 RAB6BQ9NRW1 208 aa16.91■□□□□ 0.3
OTUB1-204ENST00000447683 SPATS2LQ9NUQ6 558 aaKnown RBP16.91■□□□□ 0.3
OTUB1-204ENST00000447683 XPO1O14980 1071 aaKnown RBP16.9■□□□□ 0.3
OTUB1-204ENST00000447683 ATP2C2O75185 946 aa16.9■□□□□ 0.3
OTUB1-204ENST00000447683 IGHA2P01877 340 aa16.9■□□□□ 0.3
OTUB1-204ENST00000447683 ZFXP17010 805 aaPredicted RBP16.9■□□□□ 0.3
OTUB1-204ENST00000447683 KCNA4P22459 653 aa16.9■□□□□ 0.3
OTUB1-204ENST00000447683 CA4P22748 312 aa16.9■□□□□ 0.3
OTUB1-204ENST00000447683 LRPAP1P30533 357 aa16.9■□□□□ 0.3
OTUB1-204ENST00000447683 MSH2P43246 934 aa16.9■□□□□ 0.3
OTUB1-204ENST00000447683 ATXN1P54253 815 aaKnown RBP16.9■□□□□ 0.3
OTUB1-204ENST00000447683 LILRA4P59901 499 aa16.9■□□□□ 0.3
OTUB1-204ENST00000447683 BEX3Q00994 111 aa16.9■□□□□ 0.3
OTUB1-204ENST00000447683 SLC1A5Q15758 541 aa16.9■□□□□ 0.3
OTUB1-204ENST00000447683 PDK4Q16654 411 aa16.9■□□□□ 0.3
OTUB1-204ENST00000447683 PPP6R3Q5H9R7 873 aaPredicted RBP16.9■□□□□ 0.3
OTUB1-204ENST00000447683 STRADAQ7RTN6 431 aa16.9■□□□□ 0.3
OTUB1-204ENST00000447683 OSTM1Q86WC4 334 aa16.9■□□□□ 0.3
OTUB1-204ENST00000447683 TOP6BLQ8N6T0 577 aa16.9■□□□□ 0.3
OTUB1-204ENST00000447683 CYTH2Q99418 400 aa16.9■□□□□ 0.3
OTUB1-204ENST00000447683 SLC40A1Q9NP59 571 aa16.9■□□□□ 0.3
OTUB1-204ENST00000447683 PNPLA8Q9NP80 782 aa16.9■□□□□ 0.3
OTUB1-204ENST00000447683 AP4E1Q9UPM8 1137 aa16.9■□□□□ 0.3
OTUB1-204ENST00000447683 IGF2BP3O00425 579 aaKnown RBP eCLIP16.9■□□□□ 0.3
OTUB1-204ENST00000447683 HUS1O60921 280 aa16.9■□□□□ 0.3
OTUB1-204ENST00000447683 TOMM70O94826 608 aa16.9■□□□□ 0.3
OTUB1-204ENST00000447683 FAM163BP0C2L3 166 aa16.9■□□□□ 0.3
OTUB1-204ENST00000447683 TKTP29401 623 aaKnown RBP16.9■□□□□ 0.3
OTUB1-204ENST00000447683 MTM1Q13496 603 aa16.9■□□□□ 0.3
OTUB1-204ENST00000447683 EFHC1Q5JVL4 640 aa16.9■□□□□ 0.3
OTUB1-204ENST00000447683 CDKL3Q8IVW4 592 aaPredicted RBP16.9■□□□□ 0.3
OTUB1-204ENST00000447683 AGGF1Q8N302 714 aaeCLIP16.9■□□□□ 0.3
OTUB1-204ENST00000447683 HNRNPABQ99729 332 aaKnown RBP16.9■□□□□ 0.3
OTUB1-204ENST00000447683 DHX35Q9H5Z1 703 aaKnown RBP16.9■□□□□ 0.3
OTUB1-204ENST00000447683 ETNK2Q9NVF9 386 aa16.9■□□□□ 0.3
OTUB1-204ENST00000447683 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.9■□□□□ 0.3
OTUB1-204ENST00000447683 GRID1Q9ULK0 1009 aa16.9■□□□□ 0.3
OTUB1-204ENST00000447683 TCRBV9S1A1TA0A576 114 aa16.89■□□□□ 0.29
OTUB1-204ENST00000447683 KBTBD13C9JR72 458 aa16.89■□□□□ 0.29
OTUB1-204ENST00000447683 ZWINTO95229 277 aa16.89■□□□□ 0.29
OTUB1-204ENST00000447683 KRT4P19013 534 aa16.89■□□□□ 0.29
OTUB1-204ENST00000447683 NR2C2P49116 596 aa16.89■□□□□ 0.29
OTUB1-204ENST00000447683 GALNTL6Q49A17 601 aa16.89■□□□□ 0.29
OTUB1-204ENST00000447683 WLSQ5T9L3 541 aa16.89■□□□□ 0.29
OTUB1-204ENST00000447683 B3GALNT2Q8NCR0 500 aa16.89■□□□□ 0.29
OTUB1-204ENST00000447683 PITPNM3Q9BZ71 974 aa16.89■□□□□ 0.29
OTUB1-204ENST00000447683 KLC2Q9H0B6 622 aa16.89■□□□□ 0.29
OTUB1-204ENST00000447683 PTGESO14684 152 aa16.88■□□□□ 0.29
OTUB1-204ENST00000447683 GNAT1P11488 350 aa16.88■□□□□ 0.29
OTUB1-204ENST00000447683 MATKP42679 507 aa16.88■□□□□ 0.29
OTUB1-204ENST00000447683 YWHAZP63104 245 aaKnown RBP16.88■□□□□ 0.29
OTUB1-204ENST00000447683 SLC10A2Q12908 348 aaPredicted RBP16.88■□□□□ 0.29
OTUB1-204ENST00000447683 PDCD2Q16342 344 aaPredicted RBP16.88■□□□□ 0.29
OTUB1-204ENST00000447683 SLC45A4Q5BKX6 768 aa16.88■□□□□ 0.29
OTUB1-204ENST00000447683 CST9Q5W186 159 aa16.88■□□□□ 0.29
OTUB1-204ENST00000447683 RNF43Q68DV7 783 aa16.88■□□□□ 0.29
OTUB1-204ENST00000447683 SLC44A1Q8WWI5 657 aa16.88■□□□□ 0.29
OTUB1-204ENST00000447683 ALKBH8Q96BT7 664 aaKnown RBP16.88■□□□□ 0.29
OTUB1-204ENST00000447683 KCTD15Q96SI1 283 aaPredicted RBP16.88■□□□□ 0.29
OTUB1-204ENST00000447683 DUSP16Q9BY84 665 aa16.88■□□□□ 0.29
OTUB1-204ENST00000447683 HAUS2Q9NVX0 235 aa16.88■□□□□ 0.29
OTUB1-204ENST00000447683 STARD13Q9Y3M8 1113 aa16.88■□□□□ 0.29
OTUB1-204ENST00000447683 GCATO75600 419 aa16.88■□□□□ 0.29
OTUB1-204ENST00000447683 PIAS1O75925 651 aa16.88■□□□□ 0.29
OTUB1-204ENST00000447683 MAP3K6O95382 1288 aa16.88■□□□□ 0.29
OTUB1-204ENST00000447683 C1QAP02745 245 aa16.88■□□□□ 0.29
OTUB1-204ENST00000447683 PURAQ00577 322 aaKnown RBP16.88■□□□□ 0.29
OTUB1-204ENST00000447683 GBE1Q04446 702 aa16.88■□□□□ 0.29
OTUB1-204ENST00000447683 PIGZQ86VD9 579 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms