RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 USP33Q8TEY7 942 aa13.18□□□□□ -0.3
SSR4-205ENST00000447375 MYLPFQ96A32 169 aa13.18□□□□□ -0.3
SSR4-205ENST00000447375 PCED1BQ96HM7 432 aa13.18□□□□□ -0.3
SSR4-205ENST00000447375 TNIP3Q96KP6 325 aa13.18□□□□□ -0.3
SSR4-205ENST00000447375 DPEP3Q9H4B8 488 aa13.18□□□□□ -0.3
SSR4-205ENST00000447375 FAM124BQ9H5Z6 455 aaPredicted RBP13.18□□□□□ -0.3
SSR4-205ENST00000447375 ECT2Q9H8V3 914 aa13.18□□□□□ -0.3
SSR4-205ENST00000447375 KIF9Q9HAQ2 790 aa13.18□□□□□ -0.3
SSR4-205ENST00000447375 TDP1Q9NUW8 608 aa13.18□□□□□ -0.3
SSR4-205ENST00000447375 MAGEC2Q9UBF1 373 aaPredicted RBP13.18□□□□□ -0.3
SSR4-205ENST00000447375 DKK4Q9UBT3 224 aa13.18□□□□□ -0.3
SSR4-205ENST00000447375 RAI2Q9Y5P3 530 aa13.18□□□□□ -0.3
SSR4-205ENST00000447375 CACNA1EQ15878 2313 aa13.18□□□□□ -0.3
SSR4-205ENST00000447375 SERPINF2P08697 491 aa13.17□□□□□ -0.3
SSR4-205ENST00000447375 HMGA1P17096 107 aaKnown RBP13.17□□□□□ -0.3
SSR4-205ENST00000447375 BDNFP23560 247 aa13.17□□□□□ -0.3
SSR4-205ENST00000447375 HOXD12P35452 270 aa13.17□□□□□ -0.3
SSR4-205ENST00000447375 P2RY2P41231 377 aa13.17□□□□□ -0.3
SSR4-205ENST00000447375 SEC13P55735 322 aa13.17□□□□□ -0.3
SSR4-205ENST00000447375 VEPH1Q14D04 833 aa13.17□□□□□ -0.3
SSR4-205ENST00000447375 CRY1Q16526 586 aa13.17□□□□□ -0.3
SSR4-205ENST00000447375 DDR2Q16832 855 aa13.17□□□□□ -0.3
SSR4-205ENST00000447375 MDH1BQ5I0G3 518 aa13.17□□□□□ -0.3
SSR4-205ENST00000447375 CCDC33Q8N5R6 958 aa13.17□□□□□ -0.3
SSR4-205ENST00000447375 OR2I1PQ8NGU4 316 aa13.17□□□□□ -0.3
SSR4-205ENST00000447375 LMO3Q8TAP4 145 aa13.17□□□□□ -0.3
SSR4-205ENST00000447375 TATDN2Q93075 761 aa13.17□□□□□ -0.3
SSR4-205ENST00000447375 CEP295NLQ96MC4 621 aa13.17□□□□□ -0.3
SSR4-205ENST00000447375 B3GNT5Q9BYG0 378 aa13.17□□□□□ -0.3
SSR4-205ENST00000447375 THAP9Q9H5L6 903 aa13.17□□□□□ -0.3
SSR4-205ENST00000447375 CAPN10Q9HC96 672 aa13.17□□□□□ -0.3
SSR4-205ENST00000447375 DNAAF2Q9NVR5 837 aaKnown RBP13.17□□□□□ -0.3
SSR4-205ENST00000447375 TMEM63CQ9P1W3 806 aa13.17□□□□□ -0.3
SSR4-205ENST00000447375 MMP17Q9ULZ9 603 aa13.17□□□□□ -0.3
SSR4-205ENST00000447375 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.17□□□□□ -0.3
SSR4-205ENST00000447375 MAST4O15021 2626 aa13.16□□□□□ -0.3
SSR4-205ENST00000447375 MYOFQ9NZM1 2061 aa13.16□□□□□ -0.3
SSR4-205ENST00000447375 ARHGAP33O14559 1287 aa13.16□□□□□ -0.3
SSR4-205ENST00000447375 AFPP02771 609 aaKnown RBP13.16□□□□□ -0.3
SSR4-205ENST00000447375 DDX6P26196 483 aaKnown RBP eCLIP13.16□□□□□ -0.3
SSR4-205ENST00000447375 GPR15P49685 360 aa13.16□□□□□ -0.3
SSR4-205ENST00000447375 CYP27A1Q02318 531 aa13.16□□□□□ -0.3
SSR4-205ENST00000447375 CETN1Q12798 172 aa13.16□□□□□ -0.3
SSR4-205ENST00000447375 BYSLQ13895 437 aaKnown RBP13.16□□□□□ -0.3
SSR4-205ENST00000447375 TPD52L1Q16890 204 aaPredicted RBP13.16□□□□□ -0.3
SSR4-205ENST00000447375 SASS6Q6UVJ0 657 aa13.16□□□□□ -0.3
SSR4-205ENST00000447375 ACOT1Q86TX2 421 aa13.16□□□□□ -0.3
SSR4-205ENST00000447375 TTC39CQ8N584 583 aa13.16□□□□□ -0.3
SSR4-205ENST00000447375 RIN3Q8TB24 985 aa13.16□□□□□ -0.3
SSR4-205ENST00000447375 WHAMMQ8TF30 809 aa13.16□□□□□ -0.3
SSR4-205ENST00000447375 GIPC2Q8TF65 315 aa13.16□□□□□ -0.3
SSR4-205ENST00000447375 SPATA17Q96L03 361 aa13.16□□□□□ -0.3
SSR4-205ENST00000447375 POLMQ9NP87 494 aaPredicted RBP13.16□□□□□ -0.3
SSR4-205ENST00000447375 DUS2Q9NX74 493 aaKnown RBP13.16□□□□□ -0.3
SSR4-205ENST00000447375 APOBEC2Q9Y235 224 aaKnown RBP13.16□□□□□ -0.3
SSR4-205ENST00000447375 A0A087WV48 116 aa13.15□□□□□ -0.3
SSR4-205ENST00000447375 K7EQS6 105 aa13.15□□□□□ -0.3
SSR4-205ENST00000447375 ATXN7O15265 892 aaPredicted RBP13.15□□□□□ -0.3
SSR4-205ENST00000447375 CILPO75339 1184 aa13.15□□□□□ -0.3
SSR4-205ENST00000447375 SYPP08247 313 aa13.15□□□□□ -0.3
SSR4-205ENST00000447375 CSH1P0DML2 217 aa13.15□□□□□ -0.3
SSR4-205ENST00000447375 CSH2P0DML3 217 aa13.15□□□□□ -0.3
SSR4-205ENST00000447375 CYP4F3Q08477 520 aa13.15□□□□□ -0.3
SSR4-205ENST00000447375 NR1H3Q13133 447 aa13.15□□□□□ -0.3
SSR4-205ENST00000447375 SLC14A1Q13336 389 aa13.15□□□□□ -0.3
SSR4-205ENST00000447375 CUL2Q13617 745 aa13.15□□□□□ -0.3
SSR4-205ENST00000447375 TMEM92Q6UXU6 159 aa13.15□□□□□ -0.3
SSR4-205ENST00000447375 TOGARAM2Q6ZUX3 1019 aa13.15□□□□□ -0.3
SSR4-205ENST00000447375 PAQR9Q6ZVX9 377 aa13.15□□□□□ -0.3
SSR4-205ENST00000447375 SLCO6A1Q86UG4 719 aa13.15□□□□□ -0.3
SSR4-205ENST00000447375 SCN4BQ8IWT1 228 aa13.15□□□□□ -0.3
SSR4-205ENST00000447375 SCUBE3Q8IX30 993 aa13.15□□□□□ -0.3
SSR4-205ENST00000447375 FUKQ8N0W3 1084 aa13.15□□□□□ -0.3
SSR4-205ENST00000447375 EHBP1Q8NDI1 1231 aa13.15□□□□□ -0.3
SSR4-205ENST00000447375 ENOX1Q8TC92 643 aaKnown RBP13.15□□□□□ -0.3
SSR4-205ENST00000447375 OSCP1Q8WVF1 389 aa13.15□□□□□ -0.3
SSR4-205ENST00000447375 C8orf48Q96LL4 319 aa13.15□□□□□ -0.3
SSR4-205ENST00000447375 MYRFLQ96LU7 910 aa13.15□□□□□ -0.3
SSR4-205ENST00000447375 TWNKQ96RR1 684 aa13.15□□□□□ -0.3
SSR4-205ENST00000447375 NT5C1AQ9BXI3 368 aa13.15□□□□□ -0.3
SSR4-205ENST00000447375 ZNF518BQ9C0D4 1074 aa13.15□□□□□ -0.3
SSR4-205ENST00000447375 ELOVL4Q9GZR5 314 aa13.15□□□□□ -0.3
SSR4-205ENST00000447375 CISHQ9NSE2 258 aa13.15□□□□□ -0.3
SSR4-205ENST00000447375 ANO10Q9NW15 660 aa13.15□□□□□ -0.3
SSR4-205ENST00000447375 BCCIPQ9P287 314 aaKnown RBP eCLIP13.15□□□□□ -0.3
SSR4-205ENST00000447375 HMGXB4Q9UGU5 601 aa13.15□□□□□ -0.3
SSR4-205ENST00000447375 PLXNB3Q9ULL4 1909 aa13.15□□□□□ -0.3
SSR4-205ENST00000447375 ANTXRLA6NF34 631 aa13.14□□□□□ -0.31
SSR4-205ENST00000447375 CLDN5O00501 218 aa13.14□□□□□ -0.31
SSR4-205ENST00000447375 NOL4O94818 638 aa13.14□□□□□ -0.31
SSR4-205ENST00000447375 F11P03951 625 aa13.14□□□□□ -0.31
SSR4-205ENST00000447375 HNRNPLP14866 589 aaKnown RBP eCLIP13.14□□□□□ -0.31
SSR4-205ENST00000447375 CD58P19256 250 aa13.14□□□□□ -0.31
SSR4-205ENST00000447375 GRIK1P39086 918 aa13.14□□□□□ -0.31
SSR4-205ENST00000447375 IFNAR2P48551 515 aa13.14□□□□□ -0.31
SSR4-205ENST00000447375 CACNA2D1P54289 1103 aa13.14□□□□□ -0.31
SSR4-205ENST00000447375 ZNF268Q14587 947 aaPredicted RBP13.14□□□□□ -0.31
SSR4-205ENST00000447375 MTF1Q14872 753 aa13.14□□□□□ -0.31
SSR4-205ENST00000447375 STX1AQ16623 288 aa13.14□□□□□ -0.31
SSR4-205ENST00000447375 MAP7D1Q3KQU3 841 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms