RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 HGSNATQ68CP4 663 aa6.87□□□□□ -1.31
BRAFP1-201ENST00000445336 USP17L6PQ6QN14 398 aa6.87□□□□□ -1.31
BRAFP1-201ENST00000445336 REXO1Q8N1G1 1221 aaKnown RBP6.87□□□□□ -1.31
BRAFP1-201ENST00000445336 SH3RF2Q8TEC5 729 aa6.87□□□□□ -1.31
BRAFP1-201ENST00000445336 ITLN2Q8WWU7 325 aaPredicted RBP6.87□□□□□ -1.31
BRAFP1-201ENST00000445336 DDX12PQ92771 950 aa6.87□□□□□ -1.31
BRAFP1-201ENST00000445336 APOLD1Q96LR9 279 aa6.87□□□□□ -1.31
BRAFP1-201ENST00000445336 PAAF1Q9BRP4 392 aa6.87□□□□□ -1.31
BRAFP1-201ENST00000445336 PRKRIP1Q9H875 184 aaPredicted RBP6.87□□□□□ -1.31
BRAFP1-201ENST00000445336 CNNM2Q9H8M5 875 aa6.87□□□□□ -1.31
BRAFP1-201ENST00000445336 HMMRO75330 724 aa6.86□□□□□ -1.31
BRAFP1-201ENST00000445336 JMJD7P0C870 316 aa6.86□□□□□ -1.31
BRAFP1-201ENST00000445336 IST1P53990 364 aa6.86□□□□□ -1.31
BRAFP1-201ENST00000445336 ITGA1P56199 1179 aa6.86□□□□□ -1.31
BRAFP1-201ENST00000445336 SSRP1Q08945 709 aaKnown RBP6.86□□□□□ -1.31
BRAFP1-201ENST00000445336 CCDC127Q96BQ5 260 aa6.86□□□□□ -1.31
BRAFP1-201ENST00000445336 ACAP3Q96P50 834 aa6.86□□□□□ -1.31
BRAFP1-201ENST00000445336 C6orf106Q9H6K1 298 aaPredicted RBP6.86□□□□□ -1.31
BRAFP1-201ENST00000445336 HELLSQ9NRZ9 838 aa6.86□□□□□ -1.31
BRAFP1-201ENST00000445336 THAP10Q9P2Z0 257 aaPredicted RBP6.86□□□□□ -1.31
BRAFP1-201ENST00000445336 SEC63Q9UGP8 760 aaKnown RBP6.86□□□□□ -1.31
BRAFP1-201ENST00000445336 GON4LQ3T8J9 2241 aa6.86□□□□□ -1.31
BRAFP1-201ENST00000445336 BSNQ9UPA5 3926 aa6.86□□□□□ -1.31
BRAFP1-201ENST00000445336 IGHV4-34P06331 123 aa6.86□□□□□ -1.31
BRAFP1-201ENST00000445336 TGM2P21980 687 aa6.86□□□□□ -1.31
BRAFP1-201ENST00000445336 MARCKSP29966 332 aaPredicted RBP6.86□□□□□ -1.31
BRAFP1-201ENST00000445336 ADSLP30566 484 aaPredicted RBP6.86□□□□□ -1.31
BRAFP1-201ENST00000445336 ABHD18Q0P651 414 aa6.86□□□□□ -1.31
BRAFP1-201ENST00000445336 SPIDRQ14159 915 aa6.86□□□□□ -1.31
BRAFP1-201ENST00000445336 FUT11Q495W5 492 aa6.86□□□□□ -1.31
BRAFP1-201ENST00000445336 FCRL6Q6DN72 434 aa6.86□□□□□ -1.31
BRAFP1-201ENST00000445336 ZNF276Q8N554 614 aa6.86□□□□□ -1.31
BRAFP1-201ENST00000445336 FSIP1Q8NA03 581 aa6.86□□□□□ -1.31
BRAFP1-201ENST00000445336 HASPINQ8TF76 798 aa6.86□□□□□ -1.31
BRAFP1-201ENST00000445336 UCMAQ8WVF2 138 aa6.86□□□□□ -1.31
BRAFP1-201ENST00000445336 MFRPQ9BY79 579 aa6.86□□□□□ -1.31
BRAFP1-201ENST00000445336 KRT23Q9C075 422 aa6.86□□□□□ -1.31
BRAFP1-201ENST00000445336 DHX33Q9H6R0 707 aaKnown RBP6.86□□□□□ -1.31
BRAFP1-201ENST00000445336 TTC12Q9H892 705 aaPredicted RBP6.86□□□□□ -1.31
BRAFP1-201ENST00000445336 TMLHEQ9NVH6 421 aa6.86□□□□□ -1.31
BRAFP1-201ENST00000445336 PRMT7Q9NVM4 692 aaPredicted RBP6.86□□□□□ -1.31
BRAFP1-201ENST00000445336 EHD2Q9NZN4 543 aa6.86□□□□□ -1.31
BRAFP1-201ENST00000445336 C5AR2Q9P296 337 aa6.86□□□□□ -1.31
BRAFP1-201ENST00000445336 POLHQ9Y253 713 aa6.86□□□□□ -1.31
BRAFP1-201ENST00000445336 FOXP2O15409 715 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 OLFM2O95897 454 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 GIMD1P0DJR0 217 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 LAMTOR4Q0VGL1 99 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 TAF12Q16514 161 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 FERMT3Q86UX7 667 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 PLA2G4DQ86XP0 818 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 MAB21L3Q8N8X9 362 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 LEO1Q8WVC0 666 aaPredicted RBP6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 XPO6Q96QU8 1125 aaKnown RBP6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 RPF1Q9H9Y2 349 aaKnown RBP6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 WDR35Q9P2L0 1181 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 SLC27A6Q9Y2P4 619 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 ADGRG4Q8IZF6 3080 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 CHD3Q12873 2000 aaKnown RBP6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 PRAMEF33A0A0G2JMD5 474 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 K7ELQ4 463 aaPredicted RBP6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 INPP4BO15327 924 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 TIMM44O43615 452 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 CACNG3O60359 315 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 PRAMEF10O60809 474 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 STBD1O95210 358 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 MAP3K6O95382 1288 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 HMGA1P17096 107 aaKnown RBP6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 AARSP49588 968 aaKnown RBP eCLIP6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 BNIP3Q12983 259 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 LAMB3Q13751 1172 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 EIF4HQ15056 248 aaKnown RBP6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 MIIPQ5JXC2 388 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 CHPFQ8IZ52 775 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 SNX19Q92543 992 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 TEFMQ96QE5 360 aaKnown RBP6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 TAAR9Q96RI9 348 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 AMBRA1Q9C0C7 1298 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 SPHK2Q9NRA0 654 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 AKAP7Q9P0M2 348 aaPredicted RBP6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 FZD4Q9ULV1 537 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 BIRC6Q9NR09 4857 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 CSDE1O75534 798 aaKnown RBP6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 NPTXRO95502 500 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 HAPLN1P10915 354 aaPredicted RBP6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 EDN3P14138 238 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 COPAP53621 1224 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 KRTAP10-9P60411 292 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 CAMK2GQ13555 558 aaPredicted RBP6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 TTC31Q49AM3 519 aaPredicted RBP6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 IFIT1BQ5T764 474 aaKnown RBP6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 CEP85Q6P2H3 762 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 RHBDF2Q6PJF5 856 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 ZFAND4Q86XD8 727 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 IQCKQ8N0W5 287 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 MIER1Q8N108 512 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 STAG2Q8N3U4 1231 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 CCDC112Q8NEF3 446 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 ADPGKQ9BRR6 497 aa6.85□□□□□ -1.31
BRAFP1-201ENST00000445336 ABCB6Q9NP58 842 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms